RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 IGHV1-69-2A0A0G2JMI3 117 aa5.37□□□□□ -1.55
USP47-201ENST00000305481 ZNF98A6NK75 572 aa5.37□□□□□ -1.55
USP47-201ENST00000305481 UMAD1C9J7I0 102 aa5.37□□□□□ -1.55
USP47-201ENST00000305481 LYNX1G3V0Z9 82 aa5.37□□□□□ -1.55
USP47-201ENST00000305481 LYNX1P0DP58 116 aa5.37□□□□□ -1.55
USP47-201ENST00000305481 DVL1P1P54792 670 aaPredicted RBP5.37□□□□□ -1.55
USP47-201ENST00000305481 MEF2CQ06413 473 aaPredicted RBP5.37□□□□□ -1.55
USP47-201ENST00000305481 SPSB3Q6PJ21 355 aa5.37□□□□□ -1.55
USP47-201ENST00000305481 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.37□□□□□ -1.55
USP47-201ENST00000305481 DTD1Q8TEA8 209 aa5.37□□□□□ -1.55
USP47-201ENST00000305481 S1PR3Q99500 378 aa5.37□□□□□ -1.55
USP47-201ENST00000305481 TMEM204Q9BSN7 226 aa5.37□□□□□ -1.55
USP47-201ENST00000305481 RAB9BQ9NP90 201 aa5.37□□□□□ -1.55
USP47-201ENST00000305481 FBXO7Q9Y3I1 522 aa5.37□□□□□ -1.55
USP47-201ENST00000305481 TACC2O95359 2948 aa5.37□□□□□ -1.55
USP47-201ENST00000305481 A0A1B0GV50 99 aa5.36□□□□□ -1.55
USP47-201ENST00000305481 F8W036 122 aa5.36□□□□□ -1.55
USP47-201ENST00000305481 DVL1O14640 695 aa5.36□□□□□ -1.55
USP47-201ENST00000305481 SFTA3P0C7M3 94 aa5.36□□□□□ -1.55
USP47-201ENST00000305481 PLA2G5P39877 138 aa5.36□□□□□ -1.55
USP47-201ENST00000305481 MRPS11P82912 194 aaKnown RBP5.36□□□□□ -1.55
USP47-201ENST00000305481 LRRC75BQ2VPJ9 315 aa5.36□□□□□ -1.55
USP47-201ENST00000305481 ZNF672Q499Z4 452 aaPredicted RBP5.36□□□□□ -1.55
USP47-201ENST00000305481 MUC15Q8N387 334 aa5.36□□□□□ -1.55
USP47-201ENST00000305481 CA5BP1Q8WTZ4 195 aa5.36□□□□□ -1.55
USP47-201ENST00000305481 SEC11CQ9BY50 192 aa5.36□□□□□ -1.55
USP47-201ENST00000305481 TPRP12270 2363 aaKnown RBP5.36□□□□□ -1.55
USP47-201ENST00000305481 TRBV23-1A0A0A0MS06 115 aa5.36□□□□□ -1.55
USP47-201ENST00000305481 DNASE2O00115 360 aaPredicted RBP5.36□□□□□ -1.55
USP47-201ENST00000305481 GPR37O15354 613 aa5.36□□□□□ -1.55
USP47-201ENST00000305481 CT45A6P0DMU7 189 aa5.36□□□□□ -1.55
USP47-201ENST00000305481 CT45A5P0DMU8 189 aa5.36□□□□□ -1.55
USP47-201ENST00000305481 CT45A7P0DMV0 189 aa5.36□□□□□ -1.55
USP47-201ENST00000305481 COL8A2P25067 703 aa5.36□□□□□ -1.55
USP47-201ENST00000305481 RPS16P62249 146 aaKnown RBP5.36□□□□□ -1.55
USP47-201ENST00000305481 RELBQ01201 579 aa5.36□□□□□ -1.55
USP47-201ENST00000305481 OR8G2PQ6IF36 304 aa5.36□□□□□ -1.55
USP47-201ENST00000305481 HEPN1Q6WQI6 88 aa5.36□□□□□ -1.55
USP47-201ENST00000305481 VSIRQ9H7M9 311 aa5.36□□□□□ -1.55
USP47-201ENST00000305481 KAAG1Q9UBP8 84 aa5.36□□□□□ -1.55
USP47-201ENST00000305481 PRELID3BQ9Y3B1 194 aa5.36□□□□□ -1.55
USP47-201ENST00000305481 HIVEP3Q5T1R4 2406 aa5.36□□□□□ -1.55
USP47-201ENST00000305481 FAM74A7A6NL05 159 aa5.36□□□□□ -1.55
USP47-201ENST00000305481 FAM90A9PA6NNJ1 464 aa5.36□□□□□ -1.55
USP47-201ENST00000305481 RBMXL2O75526 392 aaKnown RBP5.36□□□□□ -1.55
USP47-201ENST00000305481 IFNA5P01569 189 aa5.36□□□□□ -1.55
USP47-201ENST00000305481 NQO2P16083 231 aa5.36□□□□□ -1.55
USP47-201ENST00000305481 PCP4P48539 62 aa5.36□□□□□ -1.55
USP47-201ENST00000305481 DLX6P56179 175 aa5.36□□□□□ -1.55
USP47-201ENST00000305481 HBG1P69891 147 aa5.36□□□□□ -1.55
USP47-201ENST00000305481 HBG2P69892 147 aa5.36□□□□□ -1.55
USP47-201ENST00000305481 SLC38A11Q08AI6 406 aa5.36□□□□□ -1.55
USP47-201ENST00000305481 GUK1Q16774 197 aa5.36□□□□□ -1.55
USP47-201ENST00000305481 FAM74A3Q4VXF1 159 aa5.36□□□□□ -1.55
USP47-201ENST00000305481 ZNF714Q96N38 554 aa5.36□□□□□ -1.55
USP47-201ENST00000305481 NKX6-2Q9C056 277 aaPredicted RBP5.36□□□□□ -1.55
USP47-201ENST00000305481 WDR61Q9GZS3 305 aaKnown RBP5.36□□□□□ -1.55
USP47-201ENST00000305481 TMEM140Q9NV12 185 aa5.36□□□□□ -1.55
USP47-201ENST00000305481 TET2Q6N021 2002 aaPredicted RBP5.36□□□□□ -1.55
USP47-201ENST00000305481 C15orf62A8K5M9 175 aa5.35□□□□□ -1.55
USP47-201ENST00000305481 NDUFB3O43676 98 aa5.35□□□□□ -1.55
USP47-201ENST00000305481 IGKV1-16P04430 117 aa5.35□□□□□ -1.55
USP47-201ENST00000305481 KIR2DS2P43631 304 aa5.35□□□□□ -1.55
USP47-201ENST00000305481 THBS3P49746 956 aa5.35□□□□□ -1.55
USP47-201ENST00000305481 TMEM30BQ3MIR4 351 aa5.35□□□□□ -1.55
USP47-201ENST00000305481 PDLIM3Q53GG5 364 aaPredicted RBP5.35□□□□□ -1.55
USP47-201ENST00000305481 C11orf42Q8N5U0 333 aa5.35□□□□□ -1.55
USP47-201ENST00000305481 COMMD1Q8N668 190 aa5.35□□□□□ -1.55
USP47-201ENST00000305481 OR10A7Q8NGE5 316 aa5.35□□□□□ -1.55
USP47-201ENST00000305481 OR4S2Q8NH73 311 aa5.35□□□□□ -1.55
USP47-201ENST00000305481 H1FXQ92522 213 aaKnown RBP5.35□□□□□ -1.55
USP47-201ENST00000305481 PARD6GQ9BYG4 376 aaPredicted RBP5.35□□□□□ -1.55
USP47-201ENST00000305481 HIPK2Q9H2X6 1198 aa5.35□□□□□ -1.55
USP47-201ENST00000305481 GAL3ST2Q9H3Q3 398 aa5.35□□□□□ -1.55
USP47-201ENST00000305481 CEBPZOSA8MTT3 80 aa5.35□□□□□ -1.55
USP47-201ENST00000305481 OR8U8P0C7N1 319 aa5.35□□□□□ -1.55
USP47-201ENST00000305481 RPP30P78346 268 aaKnown RBP5.35□□□□□ -1.55
USP47-201ENST00000305481 ZNF726P1Q15940 193 aa5.35□□□□□ -1.55
USP47-201ENST00000305481 LRRC10Q5BKY1 277 aa5.35□□□□□ -1.55
USP47-201ENST00000305481 SVBPQ8N300 66 aa5.35□□□□□ -1.55
USP47-201ENST00000305481 RHOVQ96L33 236 aa5.35□□□□□ -1.55
USP47-201ENST00000305481 RARRES2Q99969 163 aa5.35□□□□□ -1.55
USP47-201ENST00000305481 RPRMQ9NS64 109 aa5.35□□□□□ -1.55
USP47-201ENST00000305481 CFAP46Q8IYW2 2715 aa5.35□□□□□ -1.55
USP47-201ENST00000305481 UBE2L5PA0A1B0GUS4 154 aa5.35□□□□□ -1.55
USP47-201ENST00000305481 SRRM4A7MD48 611 aaKnown RBP5.35□□□□□ -1.55
USP47-201ENST00000305481 IFNA17P01571 189 aa5.35□□□□□ -1.55
USP47-201ENST00000305481 ARG1P05089 322 aa5.35□□□□□ -1.55
USP47-201ENST00000305481 IL6RP08887 468 aaPredicted RBP5.35□□□□□ -1.55
USP47-201ENST00000305481 DAOP14920 347 aa5.35□□□□□ -1.55
USP47-201ENST00000305481 MDKP21741 143 aaPredicted RBP5.35□□□□□ -1.55
USP47-201ENST00000305481 VDAC2P45880 294 aaPredicted RBP5.35□□□□□ -1.55
USP47-201ENST00000305481 NPBWR1P48145 328 aa5.35□□□□□ -1.55
USP47-201ENST00000305481 SPCS3P61009 180 aa5.35□□□□□ -1.55
USP47-201ENST00000305481 DIAPH2-AS1Q14236 149 aa5.35□□□□□ -1.55
USP47-201ENST00000305481 HFEQ30201 348 aa5.35□□□□□ -1.55
USP47-201ENST00000305481 OR4A47Q6IF82 309 aa5.35□□□□□ -1.55
USP47-201ENST00000305481 SLC25A24Q6NUK1 477 aa5.35□□□□□ -1.55
USP47-201ENST00000305481 ZNF833PQ6ZTB9 187 aa5.35□□□□□ -1.55
USP47-201ENST00000305481 SSX7Q7RTT5 188 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms