RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 TMEM249Q2WGJ8 235 aa9.1□□□□□ -0.95
ZNF558-201ENST00000301475 Q6P435 159 aa9.1□□□□□ -0.95
ZNF558-201ENST00000301475 TUBG2Q9NRH3 451 aa9.1□□□□□ -0.95
ZNF558-201ENST00000301475 C19orf25Q9UFG5 118 aaPredicted RBP9.1□□□□□ -0.95
ZNF558-201ENST00000301475 C15orf62A8K5M9 175 aa9.1□□□□□ -0.95
ZNF558-201ENST00000301475 PMCHP20382 165 aa9.1□□□□□ -0.95
ZNF558-201ENST00000301475 LYG1Q8N1E2 194 aa9.1□□□□□ -0.95
ZNF558-201ENST00000301475 WDR83OSQ9Y284 106 aa9.1□□□□□ -0.95
ZNF558-201ENST00000301475 YTHDF2Q9Y5A9 579 aaKnown RBP9.1□□□□□ -0.95
ZNF558-201ENST00000301475 DNPH1O43598 174 aa9.1□□□□□ -0.95
ZNF558-201ENST00000301475 GDF9O60383 454 aa9.1□□□□□ -0.95
ZNF558-201ENST00000301475 KLF3P57682 345 aaPredicted RBP9.1□□□□□ -0.95
ZNF558-201ENST00000301475 MAJINQ3KP22 176 aa9.1□□□□□ -0.95
ZNF558-201ENST00000301475 MCEMP1Q8IX19 187 aa9.1□□□□□ -0.95
ZNF558-201ENST00000301475 ZNF808Q8N4W9 903 aaPredicted RBP9.1□□□□□ -0.95
ZNF558-201ENST00000301475 APH1AQ96BI3 265 aa9.1□□□□□ -0.95
ZNF558-201ENST00000301475 WNT10AQ9GZT5 417 aa9.1□□□□□ -0.95
ZNF558-201ENST00000301475 SH2D2AQ9NP31 389 aa9.1□□□□□ -0.95
ZNF558-201ENST00000301475 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.1□□□□□ -0.95
ZNF558-201ENST00000301475 DEPPQ9NTK1 212 aa9.1□□□□□ -0.95
ZNF558-201ENST00000301475 TRAPPC2LQ9UL33 140 aa9.1□□□□□ -0.95
ZNF558-201ENST00000301475 R4GN57 208 aa9.1□□□□□ -0.95
ZNF558-201ENST00000301475 CACNA1HO95180 2353 aa9.09□□□□□ -0.95
ZNF558-201ENST00000301475 TRAV9-1A0A075B6T8 112 aa9.09□□□□□ -0.95
ZNF558-201ENST00000301475 A0A1W2PPV4 95 aa9.09□□□□□ -0.95
ZNF558-201ENST00000301475 C17orf98A8MV24 154 aa9.09□□□□□ -0.95
ZNF558-201ENST00000301475 ITGB1BP1O14713 200 aa9.09□□□□□ -0.95
ZNF558-201ENST00000301475 FOXG1P55316 489 aaPredicted RBP9.09□□□□□ -0.95
ZNF558-201ENST00000301475 RPL31P62899 125 aaKnown RBP9.09□□□□□ -0.95
ZNF558-201ENST00000301475 KIAA1644Q3SXP7 199 aa9.09□□□□□ -0.95
ZNF558-201ENST00000301475 ZNF497Q6ZNH5 498 aa9.09□□□□□ -0.95
ZNF558-201ENST00000301475 OR10D3Q8NH80 312 aa9.09□□□□□ -0.95
ZNF558-201ENST00000301475 SFXN3Q9BWM7 321 aa9.09□□□□□ -0.95
ZNF558-201ENST00000301475 CHODLQ9H9P2 273 aa9.09□□□□□ -0.95
ZNF558-201ENST00000301475 KMT2EQ8IZD2 1858 aa9.09□□□□□ -0.95
ZNF558-201ENST00000301475 EP300Q09472 2414 aaPredicted RBP9.09□□□□□ -0.95
ZNF558-201ENST00000301475 SPINK4O60575 86 aa9.09□□□□□ -0.95
ZNF558-201ENST00000301475 ZNF253O75346 499 aa9.09□□□□□ -0.95
ZNF558-201ENST00000301475 TOMM40O96008 361 aa9.09□□□□□ -0.95
ZNF558-201ENST00000301475 HINT1P49773 126 aaPredicted RBP9.09□□□□□ -0.95
ZNF558-201ENST00000301475 LINC00205P59089 165 aa9.09□□□□□ -0.95
ZNF558-201ENST00000301475 MMD2Q8IY49 270 aa9.09□□□□□ -0.95
ZNF558-201ENST00000301475 OR8I2Q8N0Y5 310 aa9.09□□□□□ -0.95
ZNF558-201ENST00000301475 ATOH7Q8N100 152 aa9.09□□□□□ -0.95
ZNF558-201ENST00000301475 KCNS1Q96KK3 526 aa9.09□□□□□ -0.95
ZNF558-201ENST00000301475 OR2D2Q9H210 308 aa9.09□□□□□ -0.95
ZNF558-201ENST00000301475 RARRES3Q9UL19 164 aa9.09□□□□□ -0.95
ZNF558-201ENST00000301475 HCFC1P51610 2035 aa9.08□□□□□ -0.96
ZNF558-201ENST00000301475 TMEM265A0A087WTH1 108 aa9.08□□□□□ -0.96
ZNF558-201ENST00000301475 A0A1W2PS18 150 aa9.08□□□□□ -0.96
ZNF558-201ENST00000301475 GJE1A6NN92 205 aa9.08□□□□□ -0.96
ZNF558-201ENST00000301475 SS18L1O75177 396 aaPredicted RBP9.08□□□□□ -0.96
ZNF558-201ENST00000301475 C3orf79P0CE67 100 aa9.08□□□□□ -0.96
ZNF558-201ENST00000301475 STAG3L2P0CL84 134 aa9.08□□□□□ -0.96
ZNF558-201ENST00000301475 STAG3L3P0CL85 134 aa9.08□□□□□ -0.96
ZNF558-201ENST00000301475 CDKN1BP46527 198 aa9.08□□□□□ -0.96
ZNF558-201ENST00000301475 ZNF83P51522 516 aa9.08□□□□□ -0.96
ZNF558-201ENST00000301475 ZNF718Q3SXZ3 478 aa9.08□□□□□ -0.96
ZNF558-201ENST00000301475 MRPL14Q6P1L8 145 aaKnown RBP9.08□□□□□ -0.96
ZNF558-201ENST00000301475 MOB1BQ7L9L4 216 aa9.08□□□□□ -0.96
ZNF558-201ENST00000301475 NIT1Q86X76 327 aa9.08□□□□□ -0.96
ZNF558-201ENST00000301475 GMPPAQ96IJ6 420 aaPredicted RBP9.08□□□□□ -0.96
ZNF558-201ENST00000301475 RNF212BA8MTL3 300 aa9.08□□□□□ -0.96
ZNF558-201ENST00000301475 K7EP13 123 aa9.08□□□□□ -0.96
ZNF558-201ENST00000301475 MMP23AO75900 390 aa9.08□□□□□ -0.96
ZNF558-201ENST00000301475 OR2H2O95918 312 aa9.08□□□□□ -0.96
ZNF558-201ENST00000301475 RFPL3SP0C7P2 107 aa9.08□□□□□ -0.96
ZNF558-201ENST00000301475 CA6P23280 308 aa9.08□□□□□ -0.96
ZNF558-201ENST00000301475 CD1BP29016 333 aa9.08□□□□□ -0.96
ZNF558-201ENST00000301475 CCL7P80098 99 aa9.08□□□□□ -0.96
ZNF558-201ENST00000301475 ARF1P84077 181 aaKnown RBP9.08□□□□□ -0.96
ZNF558-201ENST00000301475 UBE2V1Q13404 147 aa9.08□□□□□ -0.96
ZNF558-201ENST00000301475 EIF4EBP1Q13541 118 aaPredicted RBP9.08□□□□□ -0.96
ZNF558-201ENST00000301475 ZNF645Q8N7E2 425 aa9.08□□□□□ -0.96
ZNF558-201ENST00000301475 FSCN3Q9NQT6 498 aa9.08□□□□□ -0.96
ZNF558-201ENST00000301475 V9GYV3 84 aa9.08□□□□□ -0.96
ZNF558-201ENST00000301475 RBMXL2O75526 392 aaKnown RBP9.07□□□□□ -0.96
ZNF558-201ENST00000301475 CLDN14O95500 239 aa9.07□□□□□ -0.96
ZNF558-201ENST00000301475 SSR4P51571 173 aa9.07□□□□□ -0.96
ZNF558-201ENST00000301475 TGFBR3Q03167 851 aa9.07□□□□□ -0.96
ZNF558-201ENST00000301475 UHRF2Q96PU4 802 aa9.07□□□□□ -0.96
ZNF558-201ENST00000301475 MBNL3Q9NUK0 354 aaKnown RBP9.07□□□□□ -0.96
ZNF558-201ENST00000301475 NAT8BQ9UHF3 227 aa9.07□□□□□ -0.96
ZNF558-201ENST00000301475 SIT1Q9Y3P8 196 aa9.07□□□□□ -0.96
ZNF558-201ENST00000301475 COX11Q9Y6N1 276 aa9.07□□□□□ -0.96
ZNF558-201ENST00000301475 CEP192Q8TEP8 1941 aa9.07□□□□□ -0.96
ZNF558-201ENST00000301475 IGHV1-45A0A0A0MS14 117 aa9.07□□□□□ -0.96
ZNF558-201ENST00000301475 TSPOP30536 169 aa9.07□□□□□ -0.96
ZNF558-201ENST00000301475 CXCL12P48061 93 aa9.07□□□□□ -0.96
ZNF558-201ENST00000301475 GFRA1P56159 465 aa9.07□□□□□ -0.96
ZNF558-201ENST00000301475 SLC35B1P78383 322 aa9.07□□□□□ -0.96
ZNF558-201ENST00000301475 RPEL1Q2QD12 228 aa9.07□□□□□ -0.96
ZNF558-201ENST00000301475 MIC13Q5XKP0 118 aa9.07□□□□□ -0.96
ZNF558-201ENST00000301475 FAM19A2Q8N3H0 131 aa9.07□□□□□ -0.96
ZNF558-201ENST00000301475 ALKBH7Q9BT30 221 aaPredicted RBP9.07□□□□□ -0.96
ZNF558-201ENST00000301475 TET2Q6N021 2002 aaPredicted RBP9.07□□□□□ -0.96
ZNF558-201ENST00000301475 SAA2-SAA4A0A096LPE2 208 aa9.07□□□□□ -0.96
ZNF558-201ENST00000301475 ZNF324O75467 553 aaPredicted RBP9.07□□□□□ -0.96
ZNF558-201ENST00000301475 GNG3P63215 75 aa9.07□□□□□ -0.96
ZNF558-201ENST00000301475 SPATA31B1PQ5VZV4 182 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms