RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 FAM90A13PP0C7W8 464 aa13.09□□□□□ -0.31
UBAP1-201ENST00000297661 FAM90A14PP0C7W9 464 aa13.09□□□□□ -0.31
UBAP1-201ENST00000297661 FAM90A24PP0C7X0 464 aa13.09□□□□□ -0.31
UBAP1-201ENST00000297661 PAFAH1B2P68402 229 aa13.09□□□□□ -0.31
UBAP1-201ENST00000297661 OR10V1Q8NGI7 309 aa13.09□□□□□ -0.31
UBAP1-201ENST00000297661 CACNG5Q9UF02 275 aa13.09□□□□□ -0.31
UBAP1-201ENST00000297661 KCNS2Q9ULS6 477 aa13.09□□□□□ -0.31
UBAP1-201ENST00000297661 OR2W1Q9Y3N9 320 aa13.09□□□□□ -0.31
UBAP1-201ENST00000297661 CCL25O15444 150 aa13.08□□□□□ -0.32
UBAP1-201ENST00000297661 PTTG1IPP53801 180 aa13.08□□□□□ -0.32
UBAP1-201ENST00000297661 LEMD1Q68G75 181 aa13.08□□□□□ -0.32
UBAP1-201ENST00000297661 ACSM6Q6P461 480 aa13.08□□□□□ -0.32
UBAP1-201ENST00000297661 Q6ZS49 121 aa13.08□□□□□ -0.32
UBAP1-201ENST00000297661 MDP1Q86V88 176 aa13.08□□□□□ -0.32
UBAP1-201ENST00000297661 NEIL1Q96FI4 390 aaPredicted RBP13.08□□□□□ -0.32
UBAP1-201ENST00000297661 DEGS1O15121 323 aa13.08□□□□□ -0.32
UBAP1-201ENST00000297661 PAGE4O60829 102 aa13.08□□□□□ -0.32
UBAP1-201ENST00000297661 NDUFB8O95169 186 aa13.08□□□□□ -0.32
UBAP1-201ENST00000297661 CEBPDP49716 269 aaPredicted RBP13.08□□□□□ -0.32
UBAP1-201ENST00000297661 LINC00310P59036 64 aa13.08□□□□□ -0.32
UBAP1-201ENST00000297661 SELENOTP62341 195 aa13.08□□□□□ -0.32
UBAP1-201ENST00000297661 ALKBH6Q3KRA9 238 aa13.08□□□□□ -0.32
UBAP1-201ENST00000297661 NRN1LQ496H8 165 aa13.08□□□□□ -0.32
UBAP1-201ENST00000297661 SAXO1Q8IYX7 474 aa13.08□□□□□ -0.32
UBAP1-201ENST00000297661 STPG4Q8N801 248 aa13.08□□□□□ -0.32
UBAP1-201ENST00000297661 RYDENQ9NUL5 291 aaKnown RBP13.08□□□□□ -0.32
UBAP1-201ENST00000297661 ITGB1BP1O14713 200 aa13.07□□□□□ -0.32
UBAP1-201ENST00000297661 IGKV1-39P01597 117 aa13.07□□□□□ -0.32
UBAP1-201ENST00000297661 TFF1P04155 84 aa13.07□□□□□ -0.32
UBAP1-201ENST00000297661 IGKV1D-39P04432 117 aa13.07□□□□□ -0.32
UBAP1-201ENST00000297661 NPPCP23582 126 aa13.07□□□□□ -0.32
UBAP1-201ENST00000297661 MEOX1P50221 254 aa13.07□□□□□ -0.32
UBAP1-201ENST00000297661 SPANXN5Q5MJ07 72 aa13.07□□□□□ -0.32
UBAP1-201ENST00000297661 LINC01551Q86U37 167 aa13.07□□□□□ -0.32
UBAP1-201ENST00000297661 BTF3L4Q96K17 158 aa13.07□□□□□ -0.32
UBAP1-201ENST00000297661 ZDHHC11Q9H8X9 412 aa13.07□□□□□ -0.32
UBAP1-201ENST00000297661 CTXND1A0A1B0GTU2 59 aa13.07□□□□□ -0.32
UBAP1-201ENST00000297661 MLNRO43193 412 aa13.07□□□□□ -0.32
UBAP1-201ENST00000297661 WDR1O75083 606 aa13.07□□□□□ -0.32
UBAP1-201ENST00000297661 SS18L1O75177 396 aaPredicted RBP13.07□□□□□ -0.32
UBAP1-201ENST00000297661 SERF1AO75920 110 aa13.07□□□□□ -0.32
UBAP1-201ENST00000297661 C1QTNF9P0C862 333 aa13.07□□□□□ -0.32
UBAP1-201ENST00000297661 GNG3P63215 75 aa13.07□□□□□ -0.32
UBAP1-201ENST00000297661 TMEM164Q5U3C3 297 aa13.07□□□□□ -0.32
UBAP1-201ENST00000297661 WDR86Q86TI4 376 aa13.07□□□□□ -0.32
UBAP1-201ENST00000297661 SGMS2Q8NHU3 365 aa13.07□□□□□ -0.32
UBAP1-201ENST00000297661 ELOVL5Q9NYP7 299 aa13.07□□□□□ -0.32
UBAP1-201ENST00000297661 IGLV2-14P01704 120 aa13.06□□□□□ -0.32
UBAP1-201ENST00000297661 WNT2P09544 360 aa13.06□□□□□ -0.32
UBAP1-201ENST00000297661 SLC25A6P12236 298 aa13.06□□□□□ -0.32
UBAP1-201ENST00000297661 ARR3P36575 388 aa13.06□□□□□ -0.32
UBAP1-201ENST00000297661 COMPP49747 757 aaPredicted RBP13.06□□□□□ -0.32
UBAP1-201ENST00000297661 FOXL1Q12952 345 aa13.06□□□□□ -0.32
UBAP1-201ENST00000297661 OR5AU1Q8NGC0 362 aa13.06□□□□□ -0.32
UBAP1-201ENST00000297661 TNRC6AQ8NDV7 1962 aaKnown RBP13.06□□□□□ -0.32
UBAP1-201ENST00000297661 PIEZO2Q9H5I5 2752 aa13.06□□□□□ -0.32
UBAP1-201ENST00000297661 EGR1P18146 543 aa13.06□□□□□ -0.32
UBAP1-201ENST00000297661 CXorf67Q86X51 503 aaPredicted RBP13.06□□□□□ -0.32
UBAP1-201ENST00000297661 SPRY4Q9C004 299 aa13.06□□□□□ -0.32
UBAP1-201ENST00000297661 WIPI2Q9Y4P8 454 aa13.06□□□□□ -0.32
UBAP1-201ENST00000297661 OR5G3P0C626 314 aa13.05□□□□□ -0.32
UBAP1-201ENST00000297661 SLC38A11Q08AI6 406 aa13.05□□□□□ -0.32
UBAP1-201ENST00000297661 MSMO1Q15800 293 aa13.05□□□□□ -0.32
UBAP1-201ENST00000297661 ZNF709Q8N972 641 aa13.05□□□□□ -0.32
UBAP1-201ENST00000297661 TRAPPC2LQ9UL33 140 aa13.05□□□□□ -0.32
UBAP1-201ENST00000297661 SMG1Q96Q15 3661 aaKnown RBP13.05□□□□□ -0.32
UBAP1-201ENST00000297661 NKX6-3A6NJ46 265 aa13.05□□□□□ -0.32
UBAP1-201ENST00000297661 CDIPTO14735 213 aa13.05□□□□□ -0.32
UBAP1-201ENST00000297661 CTXN2P0C2S0 81 aa13.05□□□□□ -0.32
UBAP1-201ENST00000297661 CD99P14209 185 aa13.05□□□□□ -0.32
UBAP1-201ENST00000297661 RPS16P62249 146 aaKnown RBP13.05□□□□□ -0.32
UBAP1-201ENST00000297661 RNFT1Q5M7Z0 435 aa13.05□□□□□ -0.32
UBAP1-201ENST00000297661 OR8G2PQ6IF36 304 aa13.05□□□□□ -0.32
UBAP1-201ENST00000297661 GCNT2Q8N0V5 402 aa13.05□□□□□ -0.32
UBAP1-201ENST00000297661 OR10G9Q8NGN4 311 aa13.05□□□□□ -0.32
UBAP1-201ENST00000297661 OR10G7Q8NGN6 311 aa13.05□□□□□ -0.32
UBAP1-201ENST00000297661 PARD6GQ9BYG4 376 aaPredicted RBP13.05□□□□□ -0.32
UBAP1-201ENST00000297661 C11orf94C9JXX5 98 aa13.04□□□□□ -0.32
UBAP1-201ENST00000297661 AQP7O14520 342 aa13.04□□□□□ -0.32
UBAP1-201ENST00000297661 OR2H2O95918 312 aa13.04□□□□□ -0.32
UBAP1-201ENST00000297661 IGKV1-5P01602 117 aa13.04□□□□□ -0.32
UBAP1-201ENST00000297661 GRPP07492 148 aa13.04□□□□□ -0.32
UBAP1-201ENST00000297661 CDKN1BP46527 198 aa13.04□□□□□ -0.32
UBAP1-201ENST00000297661 YPEL3P61236 119 aaPredicted RBP13.04□□□□□ -0.32
UBAP1-201ENST00000297661 ETFRF1Q6IPR1 90 aa13.04□□□□□ -0.32
UBAP1-201ENST00000297661 USF3Q68DE3 2245 aa13.04□□□□□ -0.32
UBAP1-201ENST00000297661 CEACAM8P31997 349 aaPredicted RBP13.04□□□□□ -0.32
UBAP1-201ENST00000297661 KLF3P57682 345 aaPredicted RBP13.04□□□□□ -0.32
UBAP1-201ENST00000297661 PMP22Q01453 160 aa13.04□□□□□ -0.32
UBAP1-201ENST00000297661 Q6P435 159 aa13.04□□□□□ -0.32
UBAP1-201ENST00000297661 OR4B1Q8NGF8 309 aa13.04□□□□□ -0.32
UBAP1-201ENST00000297661 SAMD10Q9BYL1 202 aa13.04□□□□□ -0.32
UBAP1-201ENST00000297661 TIMM9Q9Y5J7 89 aa13.04□□□□□ -0.32
UBAP1-201ENST00000297661 SVILO95425 2214 aa13.04□□□□□ -0.32
UBAP1-201ENST00000297661 PGPEP1LA6NFU8 196 aa13.04□□□□□ -0.32
UBAP1-201ENST00000297661 ESDP10768 282 aa13.04□□□□□ -0.32
UBAP1-201ENST00000297661 CRISP2P16562 243 aa13.04□□□□□ -0.32
UBAP1-201ENST00000297661 CBLN1P23435 193 aa13.04□□□□□ -0.32
UBAP1-201ENST00000297661 S100GP29377 79 aa13.04□□□□□ -0.32
UBAP1-201ENST00000297661 SRSF7Q16629 238 aaKnown RBP eCLIP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms