RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 LY6EQ16553 131 aa17.42■□□□□ 0.38
PDLIM3-203ENST00000284771 TMEM268Q5VZI3 342 aa17.42■□□□□ 0.38
PDLIM3-203ENST00000284771 LYZL2Q7Z4W2 148 aa17.42■□□□□ 0.38
PDLIM3-203ENST00000284771 HARBI1Q96MB7 349 aa17.42■□□□□ 0.38
PDLIM3-203ENST00000284771 DBX1A6NMT0 343 aa17.41■□□□□ 0.38
PDLIM3-203ENST00000284771 IGKV1-5P01602 117 aa17.41■□□□□ 0.38
PDLIM3-203ENST00000284771 C11orf88Q6PI97 169 aa17.41■□□□□ 0.38
PDLIM3-203ENST00000284771 SSX9Q7RTT3 188 aa17.41■□□□□ 0.38
PDLIM3-203ENST00000284771 TMEM219Q86XT9 240 aa17.41■□□□□ 0.38
PDLIM3-203ENST00000284771 SLC35G3Q8N808 338 aa17.41■□□□□ 0.38
PDLIM3-203ENST00000284771 RBPMSQ93062 196 aaKnown RBP17.41■□□□□ 0.38
PDLIM3-203ENST00000284771 R3HDM4Q96D70 268 aa17.41■□□□□ 0.38
PDLIM3-203ENST00000284771 RHOVQ96L33 236 aa17.41■□□□□ 0.38
PDLIM3-203ENST00000284771 GPN1Q9HCN4 374 aaPredicted RBP17.41■□□□□ 0.38
PDLIM3-203ENST00000284771 TCF19Q9Y242 345 aa17.41■□□□□ 0.38
PDLIM3-203ENST00000284771 A0A0G2JRQ6 117 aa17.4■□□□□ 0.38
PDLIM3-203ENST00000284771 MARCH11A6NNE9 402 aa17.4■□□□□ 0.38
PDLIM3-203ENST00000284771 CREBL2O60519 120 aaPredicted RBP17.4■□□□□ 0.38
PDLIM3-203ENST00000284771 TMEM11P17152 192 aa17.4■□□□□ 0.38
PDLIM3-203ENST00000284771 ZNF695Q8IW36 515 aa17.4■□□□□ 0.38
PDLIM3-203ENST00000284771 LGI3Q8N145 548 aa17.4■□□□□ 0.38
PDLIM3-203ENST00000284771 C12orf45Q8N5I9 185 aaPredicted RBP17.4■□□□□ 0.38
PDLIM3-203ENST00000284771 RNF5Q99942 180 aa17.4■□□□□ 0.38
PDLIM3-203ENST00000284771 A0A1B0GVG6 124 aa17.39■□□□□ 0.37
PDLIM3-203ENST00000284771 A6NDX4 124 aa17.39■□□□□ 0.37
PDLIM3-203ENST00000284771 ADAP1O75689 374 aa17.39■□□□□ 0.37
PDLIM3-203ENST00000284771 NQO2P16083 231 aa17.39■□□□□ 0.37
PDLIM3-203ENST00000284771 LGALS7P47929 136 aa17.39■□□□□ 0.37
PDLIM3-203ENST00000284771 IZUMO4Q1ZYL8 232 aa17.39■□□□□ 0.37
PDLIM3-203ENST00000284771 C2orf68Q2NKX9 166 aa17.39■□□□□ 0.37
PDLIM3-203ENST00000284771 PHB2Q99623 299 aa17.39■□□□□ 0.37
PDLIM3-203ENST00000284771 OR51J1Q9H342 316 aa17.39■□□□□ 0.37
PDLIM3-203ENST00000284771 TNFRSF19Q9NS68 423 aa17.39■□□□□ 0.37
PDLIM3-203ENST00000284771 COMMD9Q9P000 198 aa17.39■□□□□ 0.37
PDLIM3-203ENST00000284771 A0A0B4J2A0 478 aa17.39■□□□□ 0.37
PDLIM3-203ENST00000284771 P0C879 139 aa17.39■□□□□ 0.37
PDLIM3-203ENST00000284771 SAA1P0DJI8 122 aaPredicted RBP17.39■□□□□ 0.37
PDLIM3-203ENST00000284771 PSG5Q15238 335 aa17.39■□□□□ 0.37
PDLIM3-203ENST00000284771 POU2AF1Q16633 256 aa17.39■□□□□ 0.37
PDLIM3-203ENST00000284771 UXS1Q8NBZ7 420 aa17.39■□□□□ 0.37
PDLIM3-203ENST00000284771 NPBQ8NG41 125 aa17.39■□□□□ 0.37
PDLIM3-203ENST00000284771 COQ8AQ8NI60 647 aa17.39■□□□□ 0.37
PDLIM3-203ENST00000284771 SSMEM1Q8WWF3 244 aa17.39■□□□□ 0.37
PDLIM3-203ENST00000284771 IL22RA2Q969J5 263 aa17.39■□□□□ 0.37
PDLIM3-203ENST00000284771 DUX5Q96PT3 197 aa17.39■□□□□ 0.37
PDLIM3-203ENST00000284771 ESM1Q9NQ30 184 aa17.39■□□□□ 0.37
PDLIM3-203ENST00000284771 SHPKQ9UHJ6 478 aa17.39■□□□□ 0.37
PDLIM3-203ENST00000284771 NIPBLQ6KC79 2804 aaeCLIP17.38■□□□□ 0.37
PDLIM3-203ENST00000284771 HRASP01112 189 aa17.38■□□□□ 0.37
PDLIM3-203ENST00000284771 CRYGBP07316 175 aa17.38■□□□□ 0.37
PDLIM3-203ENST00000284771 IL6RP08887 468 aaPredicted RBP17.38■□□□□ 0.37
PDLIM3-203ENST00000284771 FAM157CP0CG43 387 aa17.38■□□□□ 0.37
PDLIM3-203ENST00000284771 MMDQ15546 238 aa17.38■□□□□ 0.37
PDLIM3-203ENST00000284771 MRGPRG-AS1Q2M3A8 158 aa17.38■□□□□ 0.37
PDLIM3-203ENST00000284771 Q6ZRM9 215 aa17.38■□□□□ 0.37
PDLIM3-203ENST00000284771 RBM14Q96PK6 669 aaKnown RBP17.38■□□□□ 0.37
PDLIM3-203ENST00000284771 TPSG1Q9NRR2 321 aa17.38■□□□□ 0.37
PDLIM3-203ENST00000284771 TRAV3A0A0B4J244 114 aa17.37■□□□□ 0.37
PDLIM3-203ENST00000284771 MPTX1A8MV57 137 aa17.37■□□□□ 0.37
PDLIM3-203ENST00000284771 SLC25A17O43808 307 aa17.37■□□□□ 0.37
PDLIM3-203ENST00000284771 CHST1O43916 411 aa17.37■□□□□ 0.37
PDLIM3-203ENST00000284771 NDUFA3O95167 84 aa17.37■□□□□ 0.37
PDLIM3-203ENST00000284771 HOXB5P09067 269 aa17.37■□□□□ 0.37
PDLIM3-203ENST00000284771 SRPXP78539 464 aa17.37■□□□□ 0.37
PDLIM3-203ENST00000284771 OR4A47Q6IF82 309 aa17.37■□□□□ 0.37
PDLIM3-203ENST00000284771 PUSL1Q8N0Z8 303 aaKnown RBP17.37■□□□□ 0.37
PDLIM3-203ENST00000284771 NBR2O15453 112 aa17.36■□□□□ 0.37
PDLIM3-203ENST00000284771 AMY1AP04745 511 aa17.36■□□□□ 0.37
PDLIM3-203ENST00000284771 NMSQ5H8A3 153 aa17.36■□□□□ 0.37
PDLIM3-203ENST00000284771 FAM71E2Q8N5Q1 922 aa17.36■□□□□ 0.37
PDLIM3-203ENST00000284771 Q8N9W7 124 aa17.36■□□□□ 0.37
PDLIM3-203ENST00000284771 DMBX1Q8NFW5 382 aa17.36■□□□□ 0.37
PDLIM3-203ENST00000284771 OR5R1Q8NH85 324 aa17.36■□□□□ 0.37
PDLIM3-203ENST00000284771 SLC25A33Q9BSK2 321 aa17.36■□□□□ 0.37
PDLIM3-203ENST00000284771 CHIAQ9BZP6 476 aa17.36■□□□□ 0.37
PDLIM3-203ENST00000284771 FBXL15Q9H469 300 aa17.36■□□□□ 0.37
PDLIM3-203ENST00000284771 TMEM140Q9NV12 185 aa17.36■□□□□ 0.37
PDLIM3-203ENST00000284771 NF1P21359 2839 aa17.36■□□□□ 0.37
PDLIM3-203ENST00000284771 NCBP2LA6PVI3 153 aaKnown RBP17.36■□□□□ 0.37
PDLIM3-203ENST00000284771 OR9G9P0C7N8 305 aa17.36■□□□□ 0.37
PDLIM3-203ENST00000284771 VDAC1P21796 283 aa17.36■□□□□ 0.37
PDLIM3-203ENST00000284771 UBE2KP61086 200 aa17.36■□□□□ 0.37
PDLIM3-203ENST00000284771 SCGB2A2Q13296 93 aa17.36■□□□□ 0.37
PDLIM3-203ENST00000284771 GPR146Q96CH1 333 aa17.36■□□□□ 0.37
PDLIM3-203ENST00000284771 TSNAXQ99598 290 aaKnown RBP17.36■□□□□ 0.37
PDLIM3-203ENST00000284771 VPREB3Q9UKI3 123 aa17.36■□□□□ 0.37
PDLIM3-203ENST00000284771 FCN1O00602 326 aa17.35■□□□□ 0.37
PDLIM3-203ENST00000284771 CCSO14618 274 aa17.35■□□□□ 0.37
PDLIM3-203ENST00000284771 RRHO14718 337 aa17.35■□□□□ 0.37
PDLIM3-203ENST00000284771 OR2F2O95006 317 aa17.35■□□□□ 0.37
PDLIM3-203ENST00000284771 AKR1C2P52895 323 aa17.35■□□□□ 0.37
PDLIM3-203ENST00000284771 PJVKQ0ZLH3 352 aa17.35■□□□□ 0.37
PDLIM3-203ENST00000284771 GGNBP1Q5YKI7 109 aa17.35■□□□□ 0.37
PDLIM3-203ENST00000284771 RBMS3Q6XE24 437 aaKnown RBP17.35■□□□□ 0.37
PDLIM3-203ENST00000284771 METTL1Q9UBP6 276 aaKnown RBP17.35■□□□□ 0.37
PDLIM3-203ENST00000284771 NSG2Q9Y328 171 aa17.35■□□□□ 0.37
PDLIM3-203ENST00000284771 SIGLEC9Q9Y336 463 aa17.35■□□□□ 0.37
PDLIM3-203ENST00000284771 MMP24Q9Y5R2 645 aa17.35■□□□□ 0.37
PDLIM3-203ENST00000284771 POMT1Q9Y6A1 747 aa17.35■□□□□ 0.37
PDLIM3-203ENST00000284771 SSNA1O43805 119 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms