RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 AAED1Q7RTV5 226 aa8.65□□□□□ -1.02
UPF3B-201ENST00000276201 ZDHHC23Q8IYP9 409 aa8.65□□□□□ -1.02
UPF3B-201ENST00000276201 TMEM37Q8WXS4 190 aa8.65□□□□□ -1.02
UPF3B-201ENST00000276201 RND1Q92730 232 aa8.65□□□□□ -1.02
UPF3B-201ENST00000276201 RAB1CQ92928 201 aa8.65□□□□□ -1.02
UPF3B-201ENST00000276201 YPEL2Q96QA6 119 aa8.65□□□□□ -1.02
UPF3B-201ENST00000276201 FGF23Q9GZV9 251 aaPredicted RBP8.65□□□□□ -1.02
UPF3B-201ENST00000276201 ARHGAP21Q5T5U3 1957 aa8.65□□□□□ -1.02
UPF3B-201ENST00000276201 COX5AP20674 150 aa8.65□□□□□ -1.02
UPF3B-201ENST00000276201 IL3RAP26951 378 aa8.65□□□□□ -1.02
UPF3B-201ENST00000276201 ACSM6Q6P461 480 aa8.65□□□□□ -1.02
UPF3B-201ENST00000276201 RPUSD4Q96CM3 377 aaKnown RBP8.65□□□□□ -1.02
UPF3B-201ENST00000276201 ELOVL1Q9BW60 279 aa8.65□□□□□ -1.02
UPF3B-201ENST00000276201 LINC00470Q9BZP3 86 aa8.65□□□□□ -1.02
UPF3B-201ENST00000276201 PKIBQ9C010 78 aa8.65□□□□□ -1.02
UPF3B-201ENST00000276201 MTCH1Q9NZJ7 389 aa8.65□□□□□ -1.02
UPF3B-201ENST00000276201 CBY1Q9Y3M2 126 aa8.65□□□□□ -1.02
UPF3B-201ENST00000276201 A0A0G2JNJ9 132 aa8.64□□□□□ -1.03
UPF3B-201ENST00000276201 A0A1W2PPQ1 181 aa8.64□□□□□ -1.03
UPF3B-201ENST00000276201 PMS2P5A8MQ11 134 aa8.64□□□□□ -1.03
UPF3B-201ENST00000276201 RPLP1P05386 114 aaKnown RBP8.64□□□□□ -1.03
UPF3B-201ENST00000276201 IAPPP10997 89 aa8.64□□□□□ -1.03
UPF3B-201ENST00000276201 ELLP55199 621 aaPredicted RBP8.64□□□□□ -1.03
UPF3B-201ENST00000276201 PPP1CBP62140 327 aa8.64□□□□□ -1.03
UPF3B-201ENST00000276201 HIST2H2BCQ6DN03 193 aa8.64□□□□□ -1.03
UPF3B-201ENST00000276201 TCTEX1D1Q8N7M0 179 aa8.64□□□□□ -1.03
UPF3B-201ENST00000276201 OR5P3Q8WZ94 311 aa8.64□□□□□ -1.03
UPF3B-201ENST00000276201 TRIB1Q96RU8 372 aa8.64□□□□□ -1.03
UPF3B-201ENST00000276201 Q9UFV3 132 aa8.64□□□□□ -1.03
UPF3B-201ENST00000276201 OR5B21A6NL26 309 aa8.64□□□□□ -1.03
UPF3B-201ENST00000276201 B4GALT1P15291 398 aa8.64□□□□□ -1.03
UPF3B-201ENST00000276201 TUBG1P23258 451 aa8.64□□□□□ -1.03
UPF3B-201ENST00000276201 CHRNB4P30926 498 aa8.64□□□□□ -1.03
UPF3B-201ENST00000276201 NTF4P34130 210 aa8.64□□□□□ -1.03
UPF3B-201ENST00000276201 GGNQ86UU5 652 aa8.64□□□□□ -1.03
UPF3B-201ENST00000276201 OR56B2PQ8NGI1 322 aa8.64□□□□□ -1.03
UPF3B-201ENST00000276201 OR4F5Q8NH21 305 aa8.64□□□□□ -1.03
UPF3B-201ENST00000276201 OR4F4Q96R69 305 aa8.64□□□□□ -1.03
UPF3B-201ENST00000276201 MIEN1Q9BRT3 115 aa8.64□□□□□ -1.03
UPF3B-201ENST00000276201 KCNIP2Q9NS61 270 aa8.64□□□□□ -1.03
UPF3B-201ENST00000276201 CLCF1Q9UBD9 225 aa8.64□□□□□ -1.03
UPF3B-201ENST00000276201 UBE2L5PA0A1B0GUS4 154 aa8.63□□□□□ -1.03
UPF3B-201ENST00000276201 MBD3L4A6NDZ8 208 aaPredicted RBP8.63□□□□□ -1.03
UPF3B-201ENST00000276201 MBD3L3A6NE82 208 aaPredicted RBP8.63□□□□□ -1.03
UPF3B-201ENST00000276201 MBD3L5A6NJ08 208 aaPredicted RBP8.63□□□□□ -1.03
UPF3B-201ENST00000276201 HS3ST1O14792 307 aa8.63□□□□□ -1.03
UPF3B-201ENST00000276201 MMP23AO75900 390 aa8.63□□□□□ -1.03
UPF3B-201ENST00000276201 NXPH3O95157 252 aa8.63□□□□□ -1.03
UPF3B-201ENST00000276201 CLDN14O95500 239 aa8.63□□□□□ -1.03
UPF3B-201ENST00000276201 COL8A1P27658 744 aa8.63□□□□□ -1.03
UPF3B-201ENST00000276201 GRNP28799 593 aaKnown RBP8.63□□□□□ -1.03
UPF3B-201ENST00000276201 CEACAM8P31997 349 aaPredicted RBP8.63□□□□□ -1.03
UPF3B-201ENST00000276201 GNB2P62879 340 aa8.63□□□□□ -1.03
UPF3B-201ENST00000276201 TESK1Q15569 626 aa8.63□□□□□ -1.03
UPF3B-201ENST00000276201 CEACAM16Q2WEN9 425 aa8.63□□□□□ -1.03
UPF3B-201ENST00000276201 LINC01551Q86U37 167 aa8.63□□□□□ -1.03
UPF3B-201ENST00000276201 C9orf106Q8NAJ2 232 aa8.63□□□□□ -1.03
UPF3B-201ENST00000276201 NECAP1Q8NC96 275 aa8.63□□□□□ -1.03
UPF3B-201ENST00000276201 OR10G9Q8NGN4 311 aa8.63□□□□□ -1.03
UPF3B-201ENST00000276201 OR10G7Q8NGN6 311 aa8.63□□□□□ -1.03
UPF3B-201ENST00000276201 MBD3L2Q8NHZ7 208 aaPredicted RBP8.63□□□□□ -1.03
UPF3B-201ENST00000276201 FGFBP3Q8TAT2 258 aa8.63□□□□□ -1.03
UPF3B-201ENST00000276201 CIB3Q96Q77 187 aaPredicted RBP8.63□□□□□ -1.03
UPF3B-201ENST00000276201 GPHA2Q96T91 129 aa8.63□□□□□ -1.03
UPF3B-201ENST00000276201 TRAPPC1Q9Y5R8 145 aa8.63□□□□□ -1.03
UPF3B-201ENST00000276201 TRAV24A0A0B4J272 114 aa8.63□□□□□ -1.03
UPF3B-201ENST00000276201 SLC33A1O00400 549 aaPredicted RBP8.63□□□□□ -1.03
UPF3B-201ENST00000276201 TNFSF12O43508 249 aa8.63□□□□□ -1.03
UPF3B-201ENST00000276201 LILRA1O75019 489 aa8.63□□□□□ -1.03
UPF3B-201ENST00000276201 TIMP3P35625 211 aa8.63□□□□□ -1.03
UPF3B-201ENST00000276201 OR3A1P47881 315 aa8.63□□□□□ -1.03
UPF3B-201ENST00000276201 C17orf78Q8N4C9 275 aa8.63□□□□□ -1.03
UPF3B-201ENST00000276201 OR51H1Q8NH63 302 aa8.63□□□□□ -1.03
UPF3B-201ENST00000276201 APOBEC3DQ96AK3 386 aaPredicted RBP8.63□□□□□ -1.03
UPF3B-201ENST00000276201 MS4A10Q96PG2 267 aa8.63□□□□□ -1.03
UPF3B-201ENST00000276201 OR51B6Q9H340 312 aa8.63□□□□□ -1.03
UPF3B-201ENST00000276201 TMEM106BQ9NUM4 274 aa8.63□□□□□ -1.03
UPF3B-201ENST00000276201 GOLT1BQ9Y3E0 138 aa8.63□□□□□ -1.03
UPF3B-201ENST00000276201 MPC1Q9Y5U8 109 aa8.63□□□□□ -1.03
UPF3B-201ENST00000276201 DOCK7Q96N67 2140 aa8.63□□□□□ -1.03
UPF3B-201ENST00000276201 IGKV3D-15A0A087WSY6 115 aa8.62□□□□□ -1.03
UPF3B-201ENST00000276201 C17orf112F2Z3M2 114 aa8.62□□□□□ -1.03
UPF3B-201ENST00000276201 SYNGR4O95473 234 aa8.62□□□□□ -1.03
UPF3B-201ENST00000276201 SCGB1D1O95968 90 aa8.62□□□□□ -1.03
UPF3B-201ENST00000276201 ZNF25P17030 456 aaPredicted RBP8.62□□□□□ -1.03
UPF3B-201ENST00000276201 CARD18P57730 90 aa8.62□□□□□ -1.03
UPF3B-201ENST00000276201 TPPP2P59282 170 aa8.62□□□□□ -1.03
UPF3B-201ENST00000276201 SPANXN5Q5MJ07 72 aa8.62□□□□□ -1.03
UPF3B-201ENST00000276201 C20orf204Q6ZNR8 217 aa8.62□□□□□ -1.03
UPF3B-201ENST00000276201 NEK7Q8TDX7 302 aa8.62□□□□□ -1.03
UPF3B-201ENST00000276201 HS3ST6Q96QI5 342 aa8.62□□□□□ -1.03
UPF3B-201ENST00000276201 TMEM208Q9BTX3 173 aa8.62□□□□□ -1.03
UPF3B-201ENST00000276201 CBLN4Q9NTU7 201 aa8.62□□□□□ -1.03
UPF3B-201ENST00000276201 ELOVL5Q9NYP7 299 aa8.62□□□□□ -1.03
UPF3B-201ENST00000276201 WIPI2Q9Y4P8 454 aa8.62□□□□□ -1.03
UPF3B-201ENST00000276201 FAM90A27PA6NNH2 459 aa8.62□□□□□ -1.03
UPF3B-201ENST00000276201 HPRT1P00492 218 aa8.62□□□□□ -1.03
UPF3B-201ENST00000276201 NPPCP23582 126 aa8.62□□□□□ -1.03
UPF3B-201ENST00000276201 Q6P435 159 aa8.62□□□□□ -1.03
UPF3B-201ENST00000276201 CPEB3Q8NE35 698 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms