RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 TNXAQ16473 311 aa12.1□□□□□ -0.47
TMEM47-201ENST00000275954 SH2D2AQ9NP31 389 aa12.1□□□□□ -0.47
TMEM47-201ENST00000275954 RPS2P15880 293 aaKnown RBP12.09□□□□□ -0.47
TMEM47-201ENST00000275954 SERF2P84101 59 aa12.09□□□□□ -0.47
TMEM47-201ENST00000275954 NRN1LQ496H8 165 aa12.09□□□□□ -0.47
TMEM47-201ENST00000275954 TGIF2LYQ8IUE0 185 aa12.09□□□□□ -0.47
TMEM47-201ENST00000275954 TGIF2LXQ8IUE1 241 aa12.09□□□□□ -0.47
TMEM47-201ENST00000275954 WFDC1Q9HC57 220 aa12.09□□□□□ -0.47
TMEM47-201ENST00000275954 NAT8Q9UHE5 227 aa12.09□□□□□ -0.47
TMEM47-201ENST00000275954 IGKV3D-15A0A087WSY6 115 aa12.09□□□□□ -0.47
TMEM47-201ENST00000275954 DNASE2O00115 360 aaPredicted RBP12.09□□□□□ -0.47
TMEM47-201ENST00000275954 OR4A8P0C604 315 aa12.09□□□□□ -0.47
TMEM47-201ENST00000275954 TRAPPC1Q9Y5R8 145 aa12.09□□□□□ -0.47
TMEM47-201ENST00000275954 RAB29O14966 203 aa12.09□□□□□ -0.47
TMEM47-201ENST00000275954 HPRT1P00492 218 aa12.09□□□□□ -0.47
TMEM47-201ENST00000275954 TRGC2P03986 189 aa12.09□□□□□ -0.47
TMEM47-201ENST00000275954 CD55P08174 381 aa12.09□□□□□ -0.47
TMEM47-201ENST00000275954 KLRB1Q12918 225 aa12.09□□□□□ -0.47
TMEM47-201ENST00000275954 ZNF705AQ6ZN79 300 aaPredicted RBP12.09□□□□□ -0.47
TMEM47-201ENST00000275954 FAM216AQ8WUB2 273 aa12.09□□□□□ -0.47
TMEM47-201ENST00000275954 BORCS7Q96B45 105 aa12.09□□□□□ -0.47
TMEM47-201ENST00000275954 GNB4Q9HAV0 340 aa12.09□□□□□ -0.47
TMEM47-201ENST00000275954 CYTL1Q9NRR1 136 aa12.09□□□□□ -0.47
TMEM47-201ENST00000275954 PLSCR2Q9NRY7 297 aa12.09□□□□□ -0.47
TMEM47-201ENST00000275954 PPIAL4EA0A075B759 164 aa12.08□□□□□ -0.48
TMEM47-201ENST00000275954 PPIAL4DF5H284 164 aa12.08□□□□□ -0.48
TMEM47-201ENST00000275954 PPIAL4FP0DN26 164 aa12.08□□□□□ -0.48
TMEM47-201ENST00000275954 MPZP25189 248 aa12.08□□□□□ -0.48
TMEM47-201ENST00000275954 HABP2Q14520 560 aaPredicted RBP12.08□□□□□ -0.48
TMEM47-201ENST00000275954 ACP7Q6ZNF0 438 aa12.08□□□□□ -0.48
TMEM47-201ENST00000275954 MSRB2Q9Y3D2 182 aa12.08□□□□□ -0.48
TMEM47-201ENST00000275954 PPIAL4AQ9Y536 164 aa12.08□□□□□ -0.48
TMEM47-201ENST00000275954 IGHV2OR16-5A0A0B4J2B6 119 aa12.08□□□□□ -0.48
TMEM47-201ENST00000275954 NDUFB4O95168 129 aa12.08□□□□□ -0.48
TMEM47-201ENST00000275954 PLAUP00749 431 aa12.08□□□□□ -0.48
TMEM47-201ENST00000275954 CCL20P78556 96 aa12.08□□□□□ -0.48
TMEM47-201ENST00000275954 PRB3Q04118 309 aaPredicted RBP12.08□□□□□ -0.48
TMEM47-201ENST00000275954 DBX2Q6ZNG2 339 aa12.08□□□□□ -0.48
TMEM47-201ENST00000275954 OR2T10Q8NGZ9 312 aa12.08□□□□□ -0.48
TMEM47-201ENST00000275954 OR5B3Q8NH48 314 aa12.08□□□□□ -0.48
TMEM47-201ENST00000275954 REG4Q9BYZ8 158 aa12.08□□□□□ -0.48
TMEM47-201ENST00000275954 XKRY2A2RUG3 117 aa12.08□□□□□ -0.48
TMEM47-201ENST00000275954 MEF2BQ02080 365 aaPredicted RBP12.08□□□□□ -0.48
TMEM47-201ENST00000275954 FLYWCH2Q96CP2 140 aaKnown RBP12.08□□□□□ -0.48
TMEM47-201ENST00000275954 ADTRPQ96IZ2 230 aa12.08□□□□□ -0.48
TMEM47-201ENST00000275954 SMIM8Q96KF7 97 aa12.08□□□□□ -0.48
TMEM47-201ENST00000275954 BOD1L1Q8NFC6 3051 aa12.08□□□□□ -0.48
TMEM47-201ENST00000275954 ETV2O00321 342 aaPredicted RBP12.07□□□□□ -0.48
TMEM47-201ENST00000275954 PSPNO60542 156 aa12.07□□□□□ -0.48
TMEM47-201ENST00000275954 RAMP3O60896 148 aa12.07□□□□□ -0.48
TMEM47-201ENST00000275954 LINC00205P59089 165 aa12.07□□□□□ -0.48
TMEM47-201ENST00000275954 PNRC1Q12796 327 aaPredicted RBP12.07□□□□□ -0.48
TMEM47-201ENST00000275954 SPNS3Q6ZMD2 512 aa12.07□□□□□ -0.48
TMEM47-201ENST00000275954 FAM216BQ8N7L0 139 aa12.07□□□□□ -0.48
TMEM47-201ENST00000275954 RCC1LQ96I51 464 aaKnown RBP12.07□□□□□ -0.48
TMEM47-201ENST00000275954 TMEM140Q9NV12 185 aa12.07□□□□□ -0.48
TMEM47-201ENST00000275954 TRBV6-7A0A0A0MS04 114 aa12.07□□□□□ -0.48
TMEM47-201ENST00000275954 PTBP3O95758 552 aaKnown RBP12.07□□□□□ -0.48
TMEM47-201ENST00000275954 HSPB1P04792 205 aaKnown RBP12.07□□□□□ -0.48
TMEM47-201ENST00000275954 FAM157CP0CG43 387 aa12.07□□□□□ -0.48
TMEM47-201ENST00000275954 SELLP14151 372 aa12.07□□□□□ -0.48
TMEM47-201ENST00000275954 UBE2L3P68036 154 aaKnown RBP12.07□□□□□ -0.48
TMEM47-201ENST00000275954 ACSF3Q4G176 576 aaPredicted RBP12.07□□□□□ -0.48
TMEM47-201ENST00000275954 YLPM1P49750 1951 aaKnown RBP12.07□□□□□ -0.48
TMEM47-201ENST00000275954 TM4SF5O14894 197 aa12.07□□□□□ -0.48
TMEM47-201ENST00000275954 GNB2P62879 340 aa12.07□□□□□ -0.48
TMEM47-201ENST00000275954 SLC35B1P78383 322 aa12.07□□□□□ -0.48
TMEM47-201ENST00000275954 LRP11Q86VZ4 500 aa12.07□□□□□ -0.48
TMEM47-201ENST00000275954 SLC24A4Q8NFF2 622 aa12.07□□□□□ -0.48
TMEM47-201ENST00000275954 BTF3L4Q96K17 158 aa12.07□□□□□ -0.48
TMEM47-201ENST00000275954 FUT9Q9Y231 359 aa12.07□□□□□ -0.48
TMEM47-201ENST00000275954 PXMP4Q9Y6I8 212 aa12.07□□□□□ -0.48
TMEM47-201ENST00000275954 FABP1P07148 127 aa12.06□□□□□ -0.48
TMEM47-201ENST00000275954 FAM3BP58499 235 aaPredicted RBP12.06□□□□□ -0.48
TMEM47-201ENST00000275954 BPIFB3P59826 476 aa12.06□□□□□ -0.48
TMEM47-201ENST00000275954 TEPPQ6URK8 271 aa12.06□□□□□ -0.48
TMEM47-201ENST00000275954 PIP4P1Q86T03 277 aa12.06□□□□□ -0.48
TMEM47-201ENST00000275954 HIST1H2BAQ96A08 127 aa12.06□□□□□ -0.48
TMEM47-201ENST00000275954 C18orf12Q96KH6 178 aa12.06□□□□□ -0.48
TMEM47-201ENST00000275954 GINS3Q9BRX5 216 aa12.06□□□□□ -0.48
TMEM47-201ENST00000275954 QTRT1Q9BXR0 403 aaKnown RBP12.06□□□□□ -0.48
TMEM47-201ENST00000275954 OR51B2Q9Y5P1 312 aa12.06□□□□□ -0.48
TMEM47-201ENST00000275954 LOC105371267A0A1B0GV96 52 aa12.06□□□□□ -0.48
TMEM47-201ENST00000275954 PGA5P0DJD9 388 aa12.06□□□□□ -0.48
TMEM47-201ENST00000275954 SUMO1P63165 101 aaKnown RBP12.06□□□□□ -0.48
TMEM47-201ENST00000275954 HCP5Q6MZN7 132 aa12.06□□□□□ -0.48
TMEM47-201ENST00000275954 GLRX5Q86SX6 157 aa12.06□□□□□ -0.48
TMEM47-201ENST00000275954 MS4A5Q9H3V2 200 aa12.06□□□□□ -0.48
TMEM47-201ENST00000275954 LIME1Q9H400 295 aa12.06□□□□□ -0.48
TMEM47-201ENST00000275954 NAT8BQ9UHF3 227 aa12.06□□□□□ -0.48
TMEM47-201ENST00000275954 TGIF2-C20orf24A0A0A6YYL0 155 aa12.06□□□□□ -0.48
TMEM47-201ENST00000275954 GNG4P50150 75 aa12.06□□□□□ -0.48
TMEM47-201ENST00000275954 C20orf204Q6ZNR8 217 aa12.06□□□□□ -0.48
TMEM47-201ENST00000275954 TMEM18Q96B42 140 aa12.06□□□□□ -0.48
TMEM47-201ENST00000275954 DMRTA2Q96SC8 542 aa12.06□□□□□ -0.48
TMEM47-201ENST00000275954 CLCF1Q9UBD9 225 aa12.06□□□□□ -0.48
TMEM47-201ENST00000275954 SLC45A2Q9UMX9 530 aa12.06□□□□□ -0.48
TMEM47-201ENST00000275954 INSIG2Q9Y5U4 225 aa12.06□□□□□ -0.48
TMEM47-201ENST00000275954 KIAA1324LA8MWY0 1029 aaPredicted RBP12.06□□□□□ -0.48
TMEM47-201ENST00000275954 K7N7A8 449 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms