RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 A0A1W2PR77 199 aa10.13□□□□□ -0.79
SHPRH-201ENST00000275233 IL4P05112 153 aa10.13□□□□□ -0.79
SHPRH-201ENST00000275233 CSRP2Q16527 193 aa10.13□□□□□ -0.79
SHPRH-201ENST00000275233 HSPB9Q9BQS6 159 aa10.13□□□□□ -0.79
SHPRH-201ENST00000275233 YAE1D1Q9NRH1 226 aa10.13□□□□□ -0.79
SHPRH-201ENST00000275233 TUBGCP6Q96RT7 1819 aa10.13□□□□□ -0.79
SHPRH-201ENST00000275233 FOXH1O75593 365 aa10.12□□□□□ -0.79
SHPRH-201ENST00000275233 PSG9Q00887 426 aa10.12□□□□□ -0.79
SHPRH-201ENST00000275233 COX19Q49B96 90 aa10.12□□□□□ -0.79
SHPRH-201ENST00000275233 AQP3Q92482 292 aa10.12□□□□□ -0.79
SHPRH-201ENST00000275233 ATG101Q9BSB4 218 aa10.12□□□□□ -0.79
SHPRH-201ENST00000275233 F11RQ9Y624 299 aaKnown RBP10.12□□□□□ -0.79
SHPRH-201ENST00000275233 MUC21A0A0G2JKD1 596 aa10.12□□□□□ -0.79
SHPRH-201ENST00000275233 MUC21A0A140T8X8 626 aa10.12□□□□□ -0.79
SHPRH-201ENST00000275233 IGKV1D-33P01593 117 aa10.12□□□□□ -0.79
SHPRH-201ENST00000275233 IGKV1-33P01594 117 aa10.12□□□□□ -0.79
SHPRH-201ENST00000275233 SMIM10L1P0DMW3 83 aa10.12□□□□□ -0.79
SHPRH-201ENST00000275233 SMAGPQ0VAQ4 97 aa10.12□□□□□ -0.79
SHPRH-201ENST00000275233 MUC21Q5SSG8 566 aa10.12□□□□□ -0.79
SHPRH-201ENST00000275233 GOLT1AQ6ZVE7 132 aa10.12□□□□□ -0.79
SHPRH-201ENST00000275233 SMIM10Q96HG1 83 aa10.12□□□□□ -0.79
SHPRH-201ENST00000275233 H0YL77 283 aa10.12□□□□□ -0.79
SHPRH-201ENST00000275233 HSPE1P61604 102 aaKnown RBP10.12□□□□□ -0.79
SHPRH-201ENST00000275233 LSM10Q969L4 123 aaKnown RBP10.12□□□□□ -0.79
SHPRH-201ENST00000275233 ASXL3Q9C0F0 2248 aa10.12□□□□□ -0.79
SHPRH-201ENST00000275233 IFNL4K9M1U5 179 aa10.12□□□□□ -0.79
SHPRH-201ENST00000275233 SERF2P84101 59 aa10.12□□□□□ -0.79
SHPRH-201ENST00000275233 KIAA1644Q3SXP7 199 aa10.12□□□□□ -0.79
SHPRH-201ENST00000275233 GCSAMLQ5JQS6 135 aa10.12□□□□□ -0.79
SHPRH-201ENST00000275233 ELOVL5Q9NYP7 299 aa10.12□□□□□ -0.79
SHPRH-201ENST00000275233 TPRP12270 2363 aaKnown RBP10.12□□□□□ -0.79
SHPRH-201ENST00000275233 A0A0B4J293 547 aa10.12□□□□□ -0.79
SHPRH-201ENST00000275233 LY6DQ14210 128 aa10.12□□□□□ -0.79
SHPRH-201ENST00000275233 SCARF2Q96GP6 870 aaPredicted RBP10.12□□□□□ -0.79
SHPRH-201ENST00000275233 WFIKKN1Q96NZ8 548 aa10.12□□□□□ -0.79
SHPRH-201ENST00000275233 FBXL15Q9H469 300 aa10.12□□□□□ -0.79
SHPRH-201ENST00000275233 GPR132Q9UNW8 380 aa10.12□□□□□ -0.79
SHPRH-201ENST00000275233 MPDU1O75352 247 aa10.12□□□□□ -0.79
SHPRH-201ENST00000275233 PRSS2P07478 247 aa10.12□□□□□ -0.79
SHPRH-201ENST00000275233 SNRPD3P62318 126 aaKnown RBP10.12□□□□□ -0.79
SHPRH-201ENST00000275233 FAM181AQ8N9Y4 354 aa10.12□□□□□ -0.79
SHPRH-201ENST00000275233 GPR61Q9BZJ8 451 aa10.12□□□□□ -0.79
SHPRH-201ENST00000275233 TMEM106BQ9NUM4 274 aa10.12□□□□□ -0.79
SHPRH-201ENST00000275233 JPT1Q9UK76 154 aa10.12□□□□□ -0.79
SHPRH-201ENST00000275233 TEX29Q8N6K0 151 aa10.11□□□□□ -0.79
SHPRH-201ENST00000275233 OR5P3Q8WZ94 311 aa10.11□□□□□ -0.79
SHPRH-201ENST00000275233 DOCK3Q8IZD9 2030 aa10.11□□□□□ -0.79
SHPRH-201ENST00000275233 CELA3BP08861 270 aa10.11□□□□□ -0.79
SHPRH-201ENST00000275233 MEIG1Q5JSS6 88 aa10.11□□□□□ -0.79
SHPRH-201ENST00000275233 Q6ZT83 130 aa10.11□□□□□ -0.79
SHPRH-201ENST00000275233 FAM168AQ92567 244 aa10.11□□□□□ -0.79
SHPRH-201ENST00000275233 MARVELD3Q96A59 401 aa10.11□□□□□ -0.79
SHPRH-201ENST00000275233 MEGF10Q96KG7 1140 aa10.11□□□□□ -0.79
SHPRH-201ENST00000275233 TP53RKQ96S44 253 aa10.11□□□□□ -0.79
SHPRH-201ENST00000275233 C7orf71A4D174 169 aa10.11□□□□□ -0.79
SHPRH-201ENST00000275233 NPFFO15130 113 aa10.11□□□□□ -0.79
SHPRH-201ENST00000275233 CECR9P0C854 216 aa10.11□□□□□ -0.79
SHPRH-201ENST00000275233 LINC00305Q7Z4B0 112 aa10.11□□□□□ -0.79
SHPRH-201ENST00000275233 DRAM1Q8N682 238 aa10.11□□□□□ -0.79
SHPRH-201ENST00000275233 RAB24Q969Q5 203 aa10.11□□□□□ -0.79
SHPRH-201ENST00000275233 SPTBP11277 2137 aa10.11□□□□□ -0.79
SHPRH-201ENST00000275233 TRGC2P03986 189 aa10.11□□□□□ -0.79
SHPRH-201ENST00000275233 SELENOTP62341 195 aa10.11□□□□□ -0.79
SHPRH-201ENST00000275233 MAP1LC3AQ9H492 121 aa10.11□□□□□ -0.79
SHPRH-201ENST00000275233 ZNF703Q9H7S9 590 aaPredicted RBP10.11□□□□□ -0.79
SHPRH-201ENST00000275233 SCN4AP35499 1836 aa10.11□□□□□ -0.79
SHPRH-201ENST00000275233 EGR1P18146 543 aa10.11□□□□□ -0.79
SHPRH-201ENST00000275233 EGR4Q05215 589 aa10.11□□□□□ -0.79
SHPRH-201ENST00000275233 TGIF2-C20orf24A0A0A6YYL0 155 aa10.1□□□□□ -0.79
SHPRH-201ENST00000275233 ZNF729A6NN14 1252 aaPredicted RBP10.1□□□□□ -0.79
SHPRH-201ENST00000275233 SLC25A38Q96DW6 304 aa10.1□□□□□ -0.79
SHPRH-201ENST00000275233 Q96M66 194 aa10.1□□□□□ -0.79
SHPRH-201ENST00000275233 C5orf66Q9H5L9 145 aa10.1□□□□□ -0.79
SHPRH-201ENST00000275233 TCF19Q9Y242 345 aa10.1□□□□□ -0.79
SHPRH-201ENST00000275233 TRAV30A0A087WSZ9 112 aa10.1□□□□□ -0.79
SHPRH-201ENST00000275233 ZNF345Q14585 488 aa10.1□□□□□ -0.79
SHPRH-201ENST00000275233 FAM216BQ8N7L0 139 aa10.1□□□□□ -0.79
SHPRH-201ENST00000275233 TMEM186Q96B77 213 aa10.1□□□□□ -0.79
SHPRH-201ENST00000275233 MRPL18Q9H0U6 180 aaKnown RBP10.1□□□□□ -0.79
SHPRH-201ENST00000275233 SELENOKQ9Y6D0 94 aa10.1□□□□□ -0.79
SHPRH-201ENST00000275233 PLXNA1Q9UIW2 1896 aa10.1□□□□□ -0.79
SHPRH-201ENST00000275233 TNS1Q9HBL0 1735 aaKnown RBP10.1□□□□□ -0.79
SHPRH-201ENST00000275233 PIN1P1O15428 100 aa10.1□□□□□ -0.79
SHPRH-201ENST00000275233 CD69Q07108 199 aa10.1□□□□□ -0.79
SHPRH-201ENST00000275233 OR51G1Q8NGK1 321 aa10.1□□□□□ -0.79
SHPRH-201ENST00000275233 FOXA2Q9Y261 457 aaPredicted RBP10.1□□□□□ -0.79
SHPRH-201ENST00000275233 TGFAP01135 160 aa10.1□□□□□ -0.79
SHPRH-201ENST00000275233 SCGB1A1P11684 91 aa10.1□□□□□ -0.79
SHPRH-201ENST00000275233 LGALS3P17931 250 aaKnown RBP10.1□□□□□ -0.79
SHPRH-201ENST00000275233 PTGDSP41222 190 aa10.1□□□□□ -0.79
SHPRH-201ENST00000275233 SPATA45Q537H7 98 aa10.1□□□□□ -0.79
SHPRH-201ENST00000275233 ASPHD2Q6ICH7 369 aa10.1□□□□□ -0.79
SHPRH-201ENST00000275233 FAM159AQ6UWV7 190 aa10.1□□□□□ -0.79
SHPRH-201ENST00000275233 TMEM105Q8N8V8 129 aa10.1□□□□□ -0.79
SHPRH-201ENST00000275233 TUBD1Q9UJT1 453 aa10.1□□□□□ -0.79
SHPRH-201ENST00000275233 CHCHD2Q9Y6H1 151 aaPredicted RBP10.1□□□□□ -0.79
SHPRH-201ENST00000275233 RRHO14718 337 aa10.1□□□□□ -0.79
SHPRH-201ENST00000275233 TFF1P04155 84 aa10.1□□□□□ -0.79
SHPRH-201ENST00000275233 PROB1E7EW31 1015 aa10.09□□□□□ -0.79
SHPRH-201ENST00000275233 IGHV3-11P01762 117 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms