RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 POU2AF1Q16633 256 aa13.73□□□□□ -0.21
SKP2-201ENST00000274254 LIAT1Q6ZQX7 453 aa13.73□□□□□ -0.21
SKP2-201ENST00000274254 OR52B4Q8NGK2 314 aa13.73□□□□□ -0.21
SKP2-201ENST00000274254 LHFPL5Q8TAF8 219 aa13.73□□□□□ -0.21
SKP2-201ENST00000274254 TSNAXQ99598 290 aaKnown RBP13.73□□□□□ -0.21
SKP2-201ENST00000274254 SLC25A33Q9BSK2 321 aa13.73□□□□□ -0.21
SKP2-201ENST00000274254 CHIAQ9BZP6 476 aa13.73□□□□□ -0.21
SKP2-201ENST00000274254 PRR13Q9NZ81 148 aa13.73□□□□□ -0.21
SKP2-201ENST00000274254 NIPBLQ6KC79 2804 aaeCLIP13.72□□□□□ -0.21
SKP2-201ENST00000274254 A0A0A6YYJ9 748 aa13.72□□□□□ -0.21
SKP2-201ENST00000274254 PRAF2O60831 178 aa13.72□□□□□ -0.21
SKP2-201ENST00000274254 NDUFA3O95167 84 aa13.72□□□□□ -0.21
SKP2-201ENST00000274254 SPDEFO95238 335 aa13.72□□□□□ -0.21
SKP2-201ENST00000274254 DUS4LO95620 317 aaKnown RBP13.72□□□□□ -0.21
SKP2-201ENST00000274254 HRASP01112 189 aa13.72□□□□□ -0.21
SKP2-201ENST00000274254 NQO2P16083 231 aa13.72□□□□□ -0.21
SKP2-201ENST00000274254 MMDQ15546 238 aa13.72□□□□□ -0.21
SKP2-201ENST00000274254 ANKRD55Q3KP44 614 aa13.72□□□□□ -0.21
SKP2-201ENST00000274254 C16orf82Q7Z2V1 217 aa13.72□□□□□ -0.21
SKP2-201ENST00000274254 CASTOR1Q8WTX7 329 aa13.72□□□□□ -0.21
SKP2-201ENST00000274254 IL22RA2Q969J5 263 aa13.72□□□□□ -0.21
SKP2-201ENST00000274254 RHOVQ96L33 236 aa13.72□□□□□ -0.21
SKP2-201ENST00000274254 DUX5Q96PT3 197 aa13.72□□□□□ -0.21
SKP2-201ENST00000274254 SEC22CQ9BRL7 303 aa13.72□□□□□ -0.21
SKP2-201ENST00000274254 TNFRSF19Q9NS68 423 aa13.72□□□□□ -0.21
SKP2-201ENST00000274254 TNCP24821 2201 aa13.72□□□□□ -0.21
SKP2-201ENST00000274254 CUBNO60494 3623 aa13.71□□□□□ -0.21
SKP2-201ENST00000274254 A0A0B4J293 547 aa13.71□□□□□ -0.21
SKP2-201ENST00000274254 MARCH11A6NNE9 402 aa13.71□□□□□ -0.21
SKP2-201ENST00000274254 NBR2O15453 112 aa13.71□□□□□ -0.21
SKP2-201ENST00000274254 CHST1O43916 411 aa13.71□□□□□ -0.21
SKP2-201ENST00000274254 DHFRP00374 187 aa13.71□□□□□ -0.21
SKP2-201ENST00000274254 SRPXP78539 464 aa13.71□□□□□ -0.21
SKP2-201ENST00000274254 PSG5Q15238 335 aa13.71□□□□□ -0.21
SKP2-201ENST00000274254 SELENOHQ8IZQ5 122 aaKnown RBP13.71□□□□□ -0.21
SKP2-201ENST00000274254 VKORC1L1Q8N0U8 176 aa13.71□□□□□ -0.21
SKP2-201ENST00000274254 FAM71E2Q8N5Q1 922 aa13.71□□□□□ -0.21
SKP2-201ENST00000274254 LRTM2Q8N967 370 aa13.71□□□□□ -0.21
SKP2-201ENST00000274254 ZNF431Q8TF32 576 aaPredicted RBP13.71□□□□□ -0.21
SKP2-201ENST00000274254 MITD1Q8WV92 249 aa13.71□□□□□ -0.21
SKP2-201ENST00000274254 RBPMSQ93062 196 aaKnown RBP13.71□□□□□ -0.21
SKP2-201ENST00000274254 R3HDM4Q96D70 268 aa13.71□□□□□ -0.21
SKP2-201ENST00000274254 SEC22AQ96IW7 307 aa13.71□□□□□ -0.21
SKP2-201ENST00000274254 AIFM2Q9BRQ8 373 aa13.71□□□□□ -0.21
SKP2-201ENST00000274254 C1RLQ9NZP8 487 aa13.71□□□□□ -0.21
SKP2-201ENST00000274254 MOB4Q9Y3A3 225 aa13.71□□□□□ -0.21
SKP2-201ENST00000274254 RRHO14718 337 aa13.7□□□□□ -0.22
SKP2-201ENST00000274254 CRYGBP07316 175 aa13.7□□□□□ -0.22
SKP2-201ENST00000274254 UBE2KP61086 200 aa13.7□□□□□ -0.22
SKP2-201ENST00000274254 TATDN3Q17R31 274 aa13.7□□□□□ -0.22
SKP2-201ENST00000274254 TMEM268Q5VZI3 342 aa13.7□□□□□ -0.22
SKP2-201ENST00000274254 CADM3Q8N126 398 aa13.7□□□□□ -0.22
SKP2-201ENST00000274254 LGI3Q8N145 548 aa13.7□□□□□ -0.22
SKP2-201ENST00000274254 Q8N9W7 124 aa13.7□□□□□ -0.22
SKP2-201ENST00000274254 JMJD8Q96S16 334 aa13.7□□□□□ -0.22
SKP2-201ENST00000274254 JMJD1CQ15652 2540 aa13.7□□□□□ -0.22
SKP2-201ENST00000274254 NCBP2LA6PVI3 153 aaKnown RBP13.69□□□□□ -0.22
SKP2-201ENST00000274254 PLXNB1O43157 2135 aa13.69□□□□□ -0.22
SKP2-201ENST00000274254 FGF16O43320 207 aa13.69□□□□□ -0.22
SKP2-201ENST00000274254 SLC25A17O43808 307 aa13.69□□□□□ -0.22
SKP2-201ENST00000274254 KRASP01116 189 aa13.69□□□□□ -0.22
SKP2-201ENST00000274254 IGKV1-5P01602 117 aa13.69□□□□□ -0.22
SKP2-201ENST00000274254 AMY1AP04745 511 aa13.69□□□□□ -0.22
SKP2-201ENST00000274254 SAA1P0DJI8 122 aaPredicted RBP13.69□□□□□ -0.22
SKP2-201ENST00000274254 G6PCP35575 357 aa13.69□□□□□ -0.22
SKP2-201ENST00000274254 C5orf64Q2M2E5 130 aa13.69□□□□□ -0.22
SKP2-201ENST00000274254 ZNF695Q8IW36 515 aa13.69□□□□□ -0.22
SKP2-201ENST00000274254 PUSL1Q8N0Z8 303 aaKnown RBP13.69□□□□□ -0.22
SKP2-201ENST00000274254 C5orf56Q8N8D9 126 aa13.69□□□□□ -0.22
SKP2-201ENST00000274254 TEX45Q8NA69 505 aa13.69□□□□□ -0.22
SKP2-201ENST00000274254 GPN1Q9HCN4 374 aaPredicted RBP13.69□□□□□ -0.22
SKP2-201ENST00000274254 KIAA1456Q9P272 454 aa13.69□□□□□ -0.22
SKP2-201ENST00000274254 A0A0B4J2A0 478 aa13.69□□□□□ -0.22
SKP2-201ENST00000274254 PIGBOS1A0A0B4J2F0 54 aa13.69□□□□□ -0.22
SKP2-201ENST00000274254 C7orf66A4D0T2 115 aa13.69□□□□□ -0.22
SKP2-201ENST00000274254 SNRPGP15A8MWD9 76 aa13.69□□□□□ -0.22
SKP2-201ENST00000274254 M0QZK8 103 aa13.69□□□□□ -0.22
SKP2-201ENST00000274254 TCF21O43680 179 aa13.69□□□□□ -0.22
SKP2-201ENST00000274254 GPR137BO60478 399 aa13.69□□□□□ -0.22
SKP2-201ENST00000274254 RNASE1P07998 156 aaKnown RBP13.69□□□□□ -0.22
SKP2-201ENST00000274254 IL6RP08887 468 aaPredicted RBP13.69□□□□□ -0.22
SKP2-201ENST00000274254 P0C879 139 aa13.69□□□□□ -0.22
SKP2-201ENST00000274254 ERVK-16P61578 105 aa13.69□□□□□ -0.22
SKP2-201ENST00000274254 UBA52P62987 128 aaKnown RBP13.69□□□□□ -0.22
SKP2-201ENST00000274254 VMA21Q3ZAQ7 101 aa13.69□□□□□ -0.22
SKP2-201ENST00000274254 OR4A47Q6IF82 309 aa13.69□□□□□ -0.22
SKP2-201ENST00000274254 SSX9Q7RTT3 188 aa13.69□□□□□ -0.22
SKP2-201ENST00000274254 SLC35G3Q8N808 338 aa13.69□□□□□ -0.22
SKP2-201ENST00000274254 DMBX1Q8NFW5 382 aa13.69□□□□□ -0.22
SKP2-201ENST00000274254 COQ8AQ8NI60 647 aa13.69□□□□□ -0.22
SKP2-201ENST00000274254 FBXL15Q9H469 300 aa13.69□□□□□ -0.22
SKP2-201ENST00000274254 RAB18Q9NP72 206 aa13.69□□□□□ -0.22
SKP2-201ENST00000274254 BET1LQ9NYM9 111 aa13.69□□□□□ -0.22
SKP2-201ENST00000274254 METTL1Q9UBP6 276 aaKnown RBP13.69□□□□□ -0.22
SKP2-201ENST00000274254 SHPKQ9UHJ6 478 aa13.69□□□□□ -0.22
SKP2-201ENST00000274254 SIGLEC9Q9Y336 463 aa13.69□□□□□ -0.22
SKP2-201ENST00000274254 DUXBA0A1W2PPF3 345 aa13.68□□□□□ -0.22
SKP2-201ENST00000274254 CREBL2O60519 120 aaPredicted RBP13.68□□□□□ -0.22
SKP2-201ENST00000274254 ATG12O94817 140 aa13.68□□□□□ -0.22
SKP2-201ENST00000274254 OR2A4O95047 310 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms