RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 FAM90A12PA8MX19 464 aa9.78□□□□□ -0.84
USP53-201ENST00000274030 FAM90A5PA8MXJ8 464 aa9.78□□□□□ -0.84
USP53-201ENST00000274030 FAM90A23PA8MXZ1 464 aa9.78□□□□□ -0.84
USP53-201ENST00000274030 SMAD7O15105 426 aaKnown RBP9.78□□□□□ -0.84
USP53-201ENST00000274030 FAM90A15PP0C7V4 464 aa9.78□□□□□ -0.84
USP53-201ENST00000274030 FAM90A13PP0C7W8 464 aa9.78□□□□□ -0.84
USP53-201ENST00000274030 FAM90A14PP0C7W9 464 aa9.78□□□□□ -0.84
USP53-201ENST00000274030 FAM90A24PP0C7X0 464 aa9.78□□□□□ -0.84
USP53-201ENST00000274030 FAM74A4Q5TZK3 123 aa9.78□□□□□ -0.84
USP53-201ENST00000274030 UNQ9370/PRO34162Q6UXP9 181 aa9.78□□□□□ -0.84
USP53-201ENST00000274030 PHLDA3Q9Y5J5 127 aa9.78□□□□□ -0.84
USP53-201ENST00000274030 QSER1Q2KHR3 1735 aa9.78□□□□□ -0.84
USP53-201ENST00000274030 IGHV3-66A0A0C4DH42 116 aa9.77□□□□□ -0.84
USP53-201ENST00000274030 A0A1W2PS18 150 aa9.77□□□□□ -0.84
USP53-201ENST00000274030 SHISA3A0PJX4 238 aa9.77□□□□□ -0.84
USP53-201ENST00000274030 RRHO14718 337 aa9.77□□□□□ -0.84
USP53-201ENST00000274030 SSBP3Q9BWW4 388 aaPredicted RBP9.77□□□□□ -0.84
USP53-201ENST00000274030 RGPD4Q7Z3J3 1758 aa9.77□□□□□ -0.85
USP53-201ENST00000274030 DLEC1Q9Y238 1755 aa9.77□□□□□ -0.85
USP53-201ENST00000274030 TGFBR3LH3BV60 316 aa9.77□□□□□ -0.85
USP53-201ENST00000274030 CA2P00918 260 aa9.77□□□□□ -0.85
USP53-201ENST00000274030 OR9G1Q8NH87 305 aa9.77□□□□□ -0.85
USP53-201ENST00000274030 ZCCHC14Q8WYQ9 949 aaKnown RBP9.77□□□□□ -0.85
USP53-201ENST00000274030 PIMREGQ9BSJ6 248 aa9.77□□□□□ -0.85
USP53-201ENST00000274030 LY75O60449 1722 aa9.77□□□□□ -0.85
USP53-201ENST00000274030 ERVH48-1M5A8F1 160 aa9.77□□□□□ -0.85
USP53-201ENST00000274030 PRB3Q04118 309 aaPredicted RBP9.77□□□□□ -0.85
USP53-201ENST00000274030 MBNL2Q5VZF2 373 aaKnown RBP9.77□□□□□ -0.85
USP53-201ENST00000274030 ASPHD2Q6ICH7 369 aa9.77□□□□□ -0.85
USP53-201ENST00000274030 OR4C13Q8NGP0 309 aa9.77□□□□□ -0.85
USP53-201ENST00000274030 IGHV3OR16-8A0A075B7F1 116 aa9.77□□□□□ -0.85
USP53-201ENST00000274030 PROB1E7EW31 1015 aa9.77□□□□□ -0.85
USP53-201ENST00000274030 NDUFA2O43678 99 aa9.77□□□□□ -0.85
USP53-201ENST00000274030 C8orf88P0DMB2 117 aa9.77□□□□□ -0.85
USP53-201ENST00000274030 CX3CL1P78423 397 aa9.77□□□□□ -0.85
USP53-201ENST00000274030 SCARF2Q96GP6 870 aaPredicted RBP9.77□□□□□ -0.85
USP53-201ENST00000274030 OR51M1Q9H341 326 aa9.77□□□□□ -0.85
USP53-201ENST00000274030 CHCHD2Q9Y6H1 151 aaPredicted RBP9.77□□□□□ -0.85
USP53-201ENST00000274030 TMEM14DPA8MWL7 114 aa9.77□□□□□ -0.85
USP53-201ENST00000274030 PTGDSP41222 190 aa9.77□□□□□ -0.85
USP53-201ENST00000274030 C19orf54Q5BKX5 351 aa9.77□□□□□ -0.85
USP53-201ENST00000274030 JPT1Q9UK76 154 aa9.77□□□□□ -0.85
USP53-201ENST00000274030 ABCA1O95477 2261 aa9.77□□□□□ -0.85
USP53-201ENST00000274030 HINT1P49773 126 aaPredicted RBP9.76□□□□□ -0.85
USP53-201ENST00000274030 PKIAP61925 76 aa9.76□□□□□ -0.85
USP53-201ENST00000274030 IGLV3-21P80748 117 aaPredicted RBP9.76□□□□□ -0.85
USP53-201ENST00000274030 FAM181AQ8N9Y4 354 aa9.76□□□□□ -0.85
USP53-201ENST00000274030 ZNF837Q96EG3 531 aaPredicted RBP9.76□□□□□ -0.85
USP53-201ENST00000274030 CLEC7AQ9BXN2 247 aa9.76□□□□□ -0.85
USP53-201ENST00000274030 MRPL18Q9H0U6 180 aaKnown RBP9.76□□□□□ -0.85
USP53-201ENST00000274030 NCOR1O75376 2440 aa9.76□□□□□ -0.85
USP53-201ENST00000274030 RPLP1P05386 114 aaKnown RBP9.76□□□□□ -0.85
USP53-201ENST00000274030 TMEM187Q14656 261 aa9.76□□□□□ -0.85
USP53-201ENST00000274030 FAM53AQ6NSI3 398 aaPredicted RBP9.76□□□□□ -0.85
USP53-201ENST00000274030 GOLT1AQ6ZVE7 132 aa9.76□□□□□ -0.85
USP53-201ENST00000274030 OR51G1Q8NGK1 321 aa9.76□□□□□ -0.85
USP53-201ENST00000274030 OR5P3Q8WZ94 311 aa9.76□□□□□ -0.85
USP53-201ENST00000274030 AQP10Q96PS8 301 aa9.76□□□□□ -0.85
USP53-201ENST00000274030 OTOFQ9HC10 1997 aa9.76□□□□□ -0.85
USP53-201ENST00000274030 FAM181BA6NEQ2 426 aa9.76□□□□□ -0.85
USP53-201ENST00000274030 UBE2L6O14933 153 aa9.76□□□□□ -0.85
USP53-201ENST00000274030 ANOS1P23352 680 aa9.76□□□□□ -0.85
USP53-201ENST00000274030 LHFPL5Q8TAF8 219 aa9.76□□□□□ -0.85
USP53-201ENST00000274030 TMEM54Q969K7 222 aa9.76□□□□□ -0.85
USP53-201ENST00000274030 SFXN3Q9BWM7 321 aa9.76□□□□□ -0.85
USP53-201ENST00000274030 LOC107984156A0A0G2JMH3 177 aa9.76□□□□□ -0.85
USP53-201ENST00000274030 NUDT3O95989 172 aa9.76□□□□□ -0.85
USP53-201ENST00000274030 PCSK4Q6UW60 755 aa9.76□□□□□ -0.85
USP53-201ENST00000274030 Q6ZT83 130 aa9.76□□□□□ -0.85
USP53-201ENST00000274030 ARL17AQ8IVW1 177 aa9.76□□□□□ -0.85
USP53-201ENST00000274030 DCTN5Q9BTE1 182 aa9.76□□□□□ -0.85
USP53-201ENST00000274030 IL4P05112 153 aa9.75□□□□□ -0.85
USP53-201ENST00000274030 PRSS2P07478 247 aa9.75□□□□□ -0.85
USP53-201ENST00000274030 RNASE1P07998 156 aaKnown RBP9.75□□□□□ -0.85
USP53-201ENST00000274030 HOXB1P14653 301 aaPredicted RBP9.75□□□□□ -0.85
USP53-201ENST00000274030 STPG3Q8N7X2 389 aa9.75□□□□□ -0.85
USP53-201ENST00000274030 LSM10Q969L4 123 aaKnown RBP9.75□□□□□ -0.85
USP53-201ENST00000274030 NABP2Q9BQ15 211 aa9.75□□□□□ -0.85
USP53-201ENST00000274030 RALYQ9UKM9 306 aaKnown RBP9.75□□□□□ -0.85
USP53-201ENST00000274030 RIF1Q5UIP0 2472 aaKnown RBP9.75□□□□□ -0.85
USP53-201ENST00000274030 HEATR5BQ9P2D3 2071 aa9.75□□□□□ -0.85
USP53-201ENST00000274030 GRIFINA4D1Z8 144 aa9.75□□□□□ -0.85
USP53-201ENST00000274030 LIPFP07098 398 aa9.75□□□□□ -0.85
USP53-201ENST00000274030 GPX1P07203 203 aa9.75□□□□□ -0.85
USP53-201ENST00000274030 ATP5G2Q06055 141 aa9.75□□□□□ -0.85
USP53-201ENST00000274030 FAM209AQ5JX71 171 aa9.75□□□□□ -0.85
USP53-201ENST00000274030 CENPVQ7Z7K6 275 aaPredicted RBP9.75□□□□□ -0.85
USP53-201ENST00000274030 ZNF98A6NK75 572 aa9.75□□□□□ -0.85
USP53-201ENST00000274030 TCF21O43680 179 aa9.75□□□□□ -0.85
USP53-201ENST00000274030 CECR9P0C854 216 aa9.75□□□□□ -0.85
USP53-201ENST00000274030 FAM106AQ4KMX7 169 aa9.75□□□□□ -0.85
USP53-201ENST00000274030 MARF1Q9Y4F3 1742 aaKnown RBP9.75□□□□□ -0.85
USP53-201ENST00000274030 AGAP20933 346 aa9.75□□□□□ -0.85
USP53-201ENST00000274030 LCN2P80188 198 aa9.75□□□□□ -0.85
USP53-201ENST00000274030 PRSS8Q16651 343 aa9.75□□□□□ -0.85
USP53-201ENST00000274030 ATOH7Q8N100 152 aa9.75□□□□□ -0.85
USP53-201ENST00000274030 GPR61Q9BZJ8 451 aa9.75□□□□□ -0.85
USP53-201ENST00000274030 SMDT1Q9H4I9 107 aa9.75□□□□□ -0.85
USP53-201ENST00000274030 ZNF703Q9H7S9 590 aaPredicted RBP9.75□□□□□ -0.85
USP53-201ENST00000274030 COL11A1P12107 1806 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms