RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 SGPP2Q8IWX5 399 aa7.57□□□□□ -1.2
CTDSPL-201ENST00000273179 CYB561D1Q8N8Q1 229 aa7.57□□□□□ -1.2
CTDSPL-201ENST00000273179 H3BS24 57 aa7.57□□□□□ -1.2
CTDSPL-201ENST00000273179 WASP42768 502 aa7.57□□□□□ -1.2
CTDSPL-201ENST00000273179 HERVK_113P63121 156 aa7.57□□□□□ -1.2
CTDSPL-201ENST00000273179 RPTNQ6XPR3 784 aa7.57□□□□□ -1.2
CTDSPL-201ENST00000273179 C10orf111Q8N326 155 aa7.57□□□□□ -1.2
CTDSPL-201ENST00000273179 C16orf52Q8NHV5 167 aa7.57□□□□□ -1.2
CTDSPL-201ENST00000273179 ZNF681Q96N22 645 aa7.57□□□□□ -1.2
CTDSPL-201ENST00000273179 CHD7Q9P2D1 2997 aa7.57□□□□□ -1.2
CTDSPL-201ENST00000273179 NUMA1Q14980 2115 aa7.57□□□□□ -1.2
CTDSPL-201ENST00000273179 ZSWIM8A7E2V4 1837 aa7.57□□□□□ -1.2
CTDSPL-201ENST00000273179 A0A0D9SEW6 157 aa7.57□□□□□ -1.2
CTDSPL-201ENST00000273179 ARRDC5A6NEK1 342 aa7.57□□□□□ -1.2
CTDSPL-201ENST00000273179 OR1I1O60431 355 aa7.57□□□□□ -1.2
CTDSPL-201ENST00000273179 NGFP01138 241 aa7.57□□□□□ -1.2
CTDSPL-201ENST00000273179 H2BFMP0C1H6 154 aa7.57□□□□□ -1.2
CTDSPL-201ENST00000273179 FAM157BP0CG42 384 aa7.57□□□□□ -1.2
CTDSPL-201ENST00000273179 ZNF85Q03923 595 aa7.57□□□□□ -1.2
CTDSPL-201ENST00000273179 MRGPREQ86SM8 312 aa7.57□□□□□ -1.2
CTDSPL-201ENST00000273179 BORCS8Q96FH0 119 aa7.57□□□□□ -1.2
CTDSPL-201ENST00000273179 MYO15AQ9UKN7 3530 aa7.57□□□□□ -1.2
CTDSPL-201ENST00000273179 FCGR2CP31995 323 aa7.56□□□□□ -1.2
CTDSPL-201ENST00000273179 IBA57Q5T440 356 aaKnown RBP7.56□□□□□ -1.2
CTDSPL-201ENST00000273179 GTSCR1Q86UQ5 136 aa7.56□□□□□ -1.2
CTDSPL-201ENST00000273179 C8orf31Q8N9H6 132 aa7.56□□□□□ -1.2
CTDSPL-201ENST00000273179 PLEKHF2Q9H8W4 249 aa7.56□□□□□ -1.2
CTDSPL-201ENST00000273179 SDR39U1Q9NRG7 319 aaPredicted RBP7.56□□□□□ -1.2
CTDSPL-201ENST00000273179 HCSTQ9UBK5 93 aa7.56□□□□□ -1.2
CTDSPL-201ENST00000273179 DNAJC15Q9Y5T4 150 aa7.56□□□□□ -1.2
CTDSPL-201ENST00000273179 MLNRO43193 412 aa7.56□□□□□ -1.2
CTDSPL-201ENST00000273179 HERVK_113P61574 105 aa7.56□□□□□ -1.2
CTDSPL-201ENST00000273179 GGTLC2Q14390 218 aa7.56□□□□□ -1.2
CTDSPL-201ENST00000273179 TMEM256Q8N2U0 113 aa7.56□□□□□ -1.2
CTDSPL-201ENST00000273179 WFDC11Q8NEX6 87 aa7.56□□□□□ -1.2
CTDSPL-201ENST00000273179 OR4F5Q8NH21 305 aa7.56□□□□□ -1.2
CTDSPL-201ENST00000273179 PRELID3AQ96N28 172 aa7.56□□□□□ -1.2
CTDSPL-201ENST00000273179 OR4F4Q96R69 305 aa7.56□□□□□ -1.2
CTDSPL-201ENST00000273179 FAM236AA0A1B0GUQ0 79 aa7.56□□□□□ -1.2
CTDSPL-201ENST00000273179 FAM236BA0A1B0GV22 79 aa7.56□□□□□ -1.2
CTDSPL-201ENST00000273179 NUS1Q96E22 293 aa7.56□□□□□ -1.2
CTDSPL-201ENST00000273179 OARD1Q9Y530 152 aa7.56□□□□□ -1.2
CTDSPL-201ENST00000273179 YTHDF2Q9Y5A9 579 aaKnown RBP7.56□□□□□ -1.2
CTDSPL-201ENST00000273179 NUP205Q92621 2012 aa7.56□□□□□ -1.2
CTDSPL-201ENST00000273179 TCRBV5S2A0A599 114 aa7.56□□□□□ -1.2
CTDSPL-201ENST00000273179 FAM157CP0CG43 387 aa7.56□□□□□ -1.2
CTDSPL-201ENST00000273179 UBE2G1P62253 170 aa7.56□□□□□ -1.2
CTDSPL-201ENST00000273179 CLLU1OSQ5K130 101 aa7.56□□□□□ -1.2
CTDSPL-201ENST00000273179 FRG2Q64ET8 278 aa7.56□□□□□ -1.2
CTDSPL-201ENST00000273179 OR51H1Q8NH63 302 aa7.56□□□□□ -1.2
CTDSPL-201ENST00000273179 FRG2BQ96QU4 278 aa7.56□□□□□ -1.2
CTDSPL-201ENST00000273179 PRORYQ9H606 182 aa7.56□□□□□ -1.2
CTDSPL-201ENST00000273179 PHPT1Q9NRX4 125 aaPredicted RBP7.56□□□□□ -1.2
CTDSPL-201ENST00000273179 TMEM100Q9NV29 134 aa7.56□□□□□ -1.2
CTDSPL-201ENST00000273179 PRUNE2Q8WUY3 3088 aa7.55□□□□□ -1.2
CTDSPL-201ENST00000273179 ARID1AO14497 2285 aa7.55□□□□□ -1.2
CTDSPL-201ENST00000273179 FCGR3AP08637 254 aa7.55□□□□□ -1.2
CTDSPL-201ENST00000273179 TSPO2Q5TGU0 170 aa7.55□□□□□ -1.2
CTDSPL-201ENST00000273179 SH2D6Q7Z4S9 175 aa7.55□□□□□ -1.2
CTDSPL-201ENST00000273179 THAP10Q9P2Z0 257 aaPredicted RBP7.55□□□□□ -1.2
CTDSPL-201ENST00000273179 PRSS50Q9UI38 385 aa7.55□□□□□ -1.2
CTDSPL-201ENST00000273179 MED19A0JLT2 244 aaPredicted RBP7.55□□□□□ -1.2
CTDSPL-201ENST00000273179 NAPSAO96009 420 aa7.55□□□□□ -1.2
CTDSPL-201ENST00000273179 GZMMP51124 257 aa7.55□□□□□ -1.2
CTDSPL-201ENST00000273179 FOXG1P55316 489 aaPredicted RBP7.55□□□□□ -1.2
CTDSPL-201ENST00000273179 KIR3DS1Q14943 382 aa7.55□□□□□ -1.2
CTDSPL-201ENST00000273179 MORN3Q6PF18 240 aaPredicted RBP7.55□□□□□ -1.2
CTDSPL-201ENST00000273179 TMEFF2Q9UIK5 374 aaPredicted RBP7.55□□□□□ -1.2
CTDSPL-201ENST00000273179 IGLV3-10A0A075B6K4 115 aa7.55□□□□□ -1.2
CTDSPL-201ENST00000273179 FAM181BA6NEQ2 426 aa7.55□□□□□ -1.2
CTDSPL-201ENST00000273179 SERF1AO75920 110 aa7.55□□□□□ -1.2
CTDSPL-201ENST00000273179 IGLV3-25P01717 112 aa7.55□□□□□ -1.2
CTDSPL-201ENST00000273179 C8orf88P0DMB2 117 aa7.55□□□□□ -1.2
CTDSPL-201ENST00000273179 EDNRAP25101 427 aa7.55□□□□□ -1.2
CTDSPL-201ENST00000273179 TMEM64Q6YI46 380 aa7.55□□□□□ -1.2
CTDSPL-201ENST00000273179 FOXC2Q99958 501 aa7.55□□□□□ -1.2
CTDSPL-201ENST00000273179 CDH20Q9HBT6 801 aa7.55□□□□□ -1.2
CTDSPL-201ENST00000273179 PRTFDC1Q9NRG1 225 aa7.55□□□□□ -1.2
CTDSPL-201ENST00000273179 A0A1W2PPM0 123 aa7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 H3BP45 60 aa7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 SCGB1C2P0DMR2 95 aa7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 PRSS3P35030 304 aa7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 HGFACQ04756 655 aa7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 COA6Q5JTJ3 125 aaKnown RBP7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 C22orf39Q6P5X5 142 aa7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 ATP5L2Q7Z4Y8 100 aa7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 JPT2Q9H910 190 aa7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 RNF186Q9NXI6 227 aa7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 GGTLC3B5MD39 225 aa7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 CSN3P07498 182 aa7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 OR9G9P0C7N8 305 aa7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 TFPIP10646 304 aa7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 CLDN6P56747 220 aa7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 RPS27LQ71UM5 84 aaKnown RBP7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 TMPRSS12Q86WS5 348 aa7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 PLAC1Q9HBJ0 212 aa7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 SPTBN5Q9NRC6 3674 aaKnown RBP7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 AQP1P29972 269 aa7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 LEPP41159 167 aa7.54□□□□□ -1.2
CTDSPL-201ENST00000273179 HSPE1P61604 102 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms