RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 BVES-AS1Q5T3Y7 98 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 VWA1Q6PCB0 445 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 CCDC71LQ8N9Z2 235 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 FER1L6-AS1Q8NA97 138 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 OR51H1Q8NH63 302 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 OR1L1Q8NH94 360 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 OR2AE1Q8NHA4 323 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 PRR7Q8TB68 274 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 CITED2Q99967 270 aaPredicted RBP7.39□□□□□ -1.23
VAPB-201ENST00000265619 PSENENQ9NZ42 101 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 MED12LQ86YW9 2145 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 G3V4G9 280 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 VENTXO95231 258 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 VDAC1P21796 283 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 CCL1P22362 96 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 CA7P43166 264 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 TCTEX1D1Q8N7M0 179 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 OR10G9Q8NGN4 311 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 OR10G7Q8NGN6 311 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 TSKUQ8WUA8 353 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 TMEM186Q96B77 213 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 KCNS1Q96KK3 526 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 DUSP23Q9BVJ7 150 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 PPIAL4EA0A075B759 164 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 PPIAL4CA0A0B4J2A2 164 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 PPIAL4DF5H284 164 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 H3BML4 177 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 MT-ATP6P00846 226 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 CELA2AP08217 269 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 PPIAL4FP0DN26 164 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 PSG2P11465 335 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 TIMP3P35625 211 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 RSPO1Q2MKA7 263 aaPredicted RBP7.39□□□□□ -1.23
VAPB-201ENST00000265619 DOK3Q7L591 496 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 ATP23Q9Y6H3 246 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 LOC102725191A0A1B0GVB3 256 aa7.38□□□□□ -1.23
VAPB-201ENST00000265619 SLC22A20A6NK97 555 aa7.38□□□□□ -1.23
VAPB-201ENST00000265619 ZNF324O75467 553 aaPredicted RBP7.38□□□□□ -1.23
VAPB-201ENST00000265619 AGFG2O95081 481 aa7.38□□□□□ -1.23
VAPB-201ENST00000265619 GP1BBP13224 206 aa7.38□□□□□ -1.23
VAPB-201ENST00000265619 SSTR5P35346 364 aa7.38□□□□□ -1.23
VAPB-201ENST00000265619 GABRA2P47869 451 aa7.38□□□□□ -1.23
VAPB-201ENST00000265619 SERF2P84101 59 aa7.38□□□□□ -1.23
VAPB-201ENST00000265619 RBPJQ06330 500 aa7.38□□□□□ -1.23
VAPB-201ENST00000265619 PLCXD3Q63HM9 321 aa7.38□□□□□ -1.23
VAPB-201ENST00000265619 APOBEC3DQ96AK3 386 aaPredicted RBP7.38□□□□□ -1.23
VAPB-201ENST00000265619 HS3ST6Q96QI5 342 aa7.38□□□□□ -1.23
VAPB-201ENST00000265619 SPIN2AQ99865 258 aa7.38□□□□□ -1.23
VAPB-201ENST00000265619 SPIN2BQ9BPZ2 258 aa7.38□□□□□ -1.23
VAPB-201ENST00000265619 MCRIP2Q9BUT9 160 aaKnown RBP7.38□□□□□ -1.23
VAPB-201ENST00000265619 CACNG5Q9UF02 275 aa7.38□□□□□ -1.23
VAPB-201ENST00000265619 TRAV38-1A0A0B4J264 116 aa7.38□□□□□ -1.23
VAPB-201ENST00000265619 IGKV1-6A0A0C4DH72 117 aa7.38□□□□□ -1.23
VAPB-201ENST00000265619 SCO2A0A1W2PP80 73 aa7.38□□□□□ -1.23
VAPB-201ENST00000265619 hDV102S1A0JD36 115 aa7.38□□□□□ -1.23
VAPB-201ENST00000265619 HSPB6O14558 160 aa7.38□□□□□ -1.23
VAPB-201ENST00000265619 TLX3O43711 291 aaPredicted RBP7.38□□□□□ -1.23
VAPB-201ENST00000265619 SPINK2P20155 84 aa7.38□□□□□ -1.23
VAPB-201ENST00000265619 UCP1P25874 307 aa7.38□□□□□ -1.23
VAPB-201ENST00000265619 TRIP6Q15654 476 aaKnown RBP7.38□□□□□ -1.23
VAPB-201ENST00000265619 STUMQ69YW2 141 aa7.38□□□□□ -1.23
VAPB-201ENST00000265619 C6orf15Q6UXA7 325 aaPredicted RBP7.38□□□□□ -1.23
VAPB-201ENST00000265619 OR8I2Q8N0Y5 310 aa7.38□□□□□ -1.23
VAPB-201ENST00000265619 PTRH2Q9Y3E5 179 aaKnown RBP7.38□□□□□ -1.23
VAPB-201ENST00000265619 SPTBN4Q9H254 2564 aa7.38□□□□□ -1.23
VAPB-201ENST00000265619 DOCK7Q96N67 2140 aa7.38□□□□□ -1.23
VAPB-201ENST00000265619 A4D1N5 150 aa7.38□□□□□ -1.23
VAPB-201ENST00000265619 RNF212BA8MTL3 300 aa7.38□□□□□ -1.23
VAPB-201ENST00000265619 IGLC1P0CG04 106 aa7.38□□□□□ -1.23
VAPB-201ENST00000265619 CD1BP29016 333 aa7.38□□□□□ -1.23
VAPB-201ENST00000265619 SRIP30626 198 aa7.38□□□□□ -1.23
VAPB-201ENST00000265619 LGALS4P56470 323 aa7.38□□□□□ -1.23
VAPB-201ENST00000265619 PAX2Q02962 417 aa7.38□□□□□ -1.23
VAPB-201ENST00000265619 C5orf17Q8NAS9 161 aa7.38□□□□□ -1.23
VAPB-201ENST00000265619 OR2M7Q8NG81 312 aa7.38□□□□□ -1.23
VAPB-201ENST00000265619 OR4S2Q8NH73 311 aa7.38□□□□□ -1.23
VAPB-201ENST00000265619 FNDC4Q9H6D8 234 aaPredicted RBP7.38□□□□□ -1.23
VAPB-201ENST00000265619 PPP1R3CQ9UQK1 317 aa7.38□□□□□ -1.23
VAPB-201ENST00000265619 SH2D7A6NKC9 451 aaPredicted RBP7.37□□□□□ -1.23
VAPB-201ENST00000265619 GJE1A6NN92 205 aa7.37□□□□□ -1.23
VAPB-201ENST00000265619 H0YJW9 148 aa7.37□□□□□ -1.23
VAPB-201ENST00000265619 ZNHIT1O43257 154 aa7.37□□□□□ -1.23
VAPB-201ENST00000265619 OR7C2O60412 319 aa7.37□□□□□ -1.23
VAPB-201ENST00000265619 CER1O95813 267 aa7.37□□□□□ -1.23
VAPB-201ENST00000265619 TCL1AP56279 114 aa7.37□□□□□ -1.23
VAPB-201ENST00000265619 DHRS13Q6UX07 377 aa7.37□□□□□ -1.23
VAPB-201ENST00000265619 DEFB125Q8N687 156 aa7.37□□□□□ -1.23
VAPB-201ENST00000265619 OR2Y1Q8NGV0 311 aa7.37□□□□□ -1.23
VAPB-201ENST00000265619 CT55Q8WUE5 264 aa7.37□□□□□ -1.23
VAPB-201ENST00000265619 NANOS1Q8WY41 292 aaKnown RBP7.37□□□□□ -1.23
VAPB-201ENST00000265619 JMJD8Q96S16 334 aa7.37□□□□□ -1.23
VAPB-201ENST00000265619 GTSF1LQ9H1H1 148 aa7.37□□□□□ -1.23
VAPB-201ENST00000265619 A0A087X0K7 114 aa7.37□□□□□ -1.23
VAPB-201ENST00000265619 CTXND1A0A1B0GTU2 59 aa7.37□□□□□ -1.23
VAPB-201ENST00000265619 MDFIC2A0A1B0GVS7 189 aa7.37□□□□□ -1.23
VAPB-201ENST00000265619 C19orf67A6NJJ6 358 aa7.37□□□□□ -1.23
VAPB-201ENST00000265619 FAM166BA8MTA8 275 aa7.37□□□□□ -1.23
VAPB-201ENST00000265619 S1PR2O95136 353 aa7.37□□□□□ -1.23
VAPB-201ENST00000265619 MC5RP33032 325 aa7.37□□□□□ -1.23
VAPB-201ENST00000265619 MYBPHQ13203 477 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms