RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 SMIM10L1P0DMW3 83 aa10.32□□□□□ -0.76
COL8A1-201ENST00000261037 C1orf100Q5SVJ3 147 aa10.32□□□□□ -0.76
COL8A1-201ENST00000261037 MBNL2Q5VZF2 373 aaKnown RBP10.32□□□□□ -0.76
COL8A1-201ENST00000261037 OR5P3Q8WZ94 311 aa10.32□□□□□ -0.76
COL8A1-201ENST00000261037 SMIM10Q96HG1 83 aa10.32□□□□□ -0.76
COL8A1-201ENST00000261037 CASP8AP2Q9UKL3 1982 aa10.31□□□□□ -0.76
COL8A1-201ENST00000261037 FHITP49789 147 aa10.31□□□□□ -0.76
COL8A1-201ENST00000261037 EGR4Q05215 589 aa10.31□□□□□ -0.76
COL8A1-201ENST00000261037 FAM27E3Q08E93 113 aa10.31□□□□□ -0.76
COL8A1-201ENST00000261037 SMAGPQ0VAQ4 97 aa10.31□□□□□ -0.76
COL8A1-201ENST00000261037 TMEM187Q14656 261 aa10.31□□□□□ -0.76
COL8A1-201ENST00000261037 STPG3Q8N7X2 389 aa10.31□□□□□ -0.76
COL8A1-201ENST00000261037 FADS6Q8N9I5 356 aa10.31□□□□□ -0.76
COL8A1-201ENST00000261037 EEF1AKMT3Q96AZ1 226 aa10.31□□□□□ -0.76
COL8A1-201ENST00000261037 TMEM45BQ96B21 275 aa10.31□□□□□ -0.76
COL8A1-201ENST00000261037 SSBP3Q9BWW4 388 aaPredicted RBP10.31□□□□□ -0.76
COL8A1-201ENST00000261037 DOCK3Q8IZD9 2030 aa10.31□□□□□ -0.76
COL8A1-201ENST00000261037 KLF4O43474 513 aa10.31□□□□□ -0.76
COL8A1-201ENST00000261037 LGALS3P17931 250 aaKnown RBP10.31□□□□□ -0.76
COL8A1-201ENST00000261037 HIST1H1AQ02539 215 aaPredicted RBP10.31□□□□□ -0.76
COL8A1-201ENST00000261037 ASPHD2Q6ICH7 369 aa10.31□□□□□ -0.76
COL8A1-201ENST00000261037 GOLT1AQ6ZVE7 132 aa10.31□□□□□ -0.76
COL8A1-201ENST00000261037 ATOH7Q8N100 152 aa10.31□□□□□ -0.76
COL8A1-201ENST00000261037 OR9G1Q8NH87 305 aa10.31□□□□□ -0.76
COL8A1-201ENST00000261037 PARLQ9H300 379 aa10.31□□□□□ -0.76
COL8A1-201ENST00000261037 IGHMP01871 453 aa10.31□□□□□ -0.76
COL8A1-201ENST00000261037 DRAM1Q8N682 238 aa10.31□□□□□ -0.76
COL8A1-201ENST00000261037 ZCCHC14Q8WYQ9 949 aaKnown RBP10.31□□□□□ -0.76
COL8A1-201ENST00000261037 NPIPB3Q92617 1050 aa10.31□□□□□ -0.76
COL8A1-201ENST00000261037 FAM90A10PA6NDY2 464 aa10.31□□□□□ -0.76
COL8A1-201ENST00000261037 FAM90A18PA6NE21 464 aa10.31□□□□□ -0.76
COL8A1-201ENST00000261037 FAM90A16PA6NEW6 464 aa10.31□□□□□ -0.76
COL8A1-201ENST00000261037 FAM90A20PA6NIJ5 464 aa10.31□□□□□ -0.76
COL8A1-201ENST00000261037 FAM90A8PA6NJQ4 464 aa10.31□□□□□ -0.76
COL8A1-201ENST00000261037 FAM90A7PA6NKC0 464 aa10.31□□□□□ -0.76
COL8A1-201ENST00000261037 FAM90A22PA8MWA6 464 aa10.31□□□□□ -0.76
COL8A1-201ENST00000261037 FAM90A12PA8MX19 464 aa10.31□□□□□ -0.76
COL8A1-201ENST00000261037 FAM90A5PA8MXJ8 464 aa10.31□□□□□ -0.76
COL8A1-201ENST00000261037 FAM90A23PA8MXZ1 464 aa10.31□□□□□ -0.76
COL8A1-201ENST00000261037 FAM90A15PP0C7V4 464 aa10.31□□□□□ -0.76
COL8A1-201ENST00000261037 FAM90A13PP0C7W8 464 aa10.31□□□□□ -0.76
COL8A1-201ENST00000261037 FAM90A14PP0C7W9 464 aa10.31□□□□□ -0.76
COL8A1-201ENST00000261037 FAM90A24PP0C7X0 464 aa10.31□□□□□ -0.76
COL8A1-201ENST00000261037 EGR1P18146 543 aa10.31□□□□□ -0.76
COL8A1-201ENST00000261037 SELENOTP62341 195 aa10.31□□□□□ -0.76
COL8A1-201ENST00000261037 LBHQ53QV2 105 aaPredicted RBP10.31□□□□□ -0.76
COL8A1-201ENST00000261037 GCSAMLQ5JQS6 135 aa10.31□□□□□ -0.76
COL8A1-201ENST00000261037 HIST1H4GQ99525 98 aa10.31□□□□□ -0.76
COL8A1-201ENST00000261037 TMEM262E9PQX1 116 aa10.3□□□□□ -0.76
COL8A1-201ENST00000261037 PPP1R32Q7Z5V6 425 aa10.3□□□□□ -0.76
COL8A1-201ENST00000261037 PUSL1Q8N0Z8 303 aaKnown RBP10.3□□□□□ -0.76
COL8A1-201ENST00000261037 OR1P1Q8NH06 330 aa10.3□□□□□ -0.76
COL8A1-201ENST00000261037 TCF19Q9Y242 345 aa10.3□□□□□ -0.76
COL8A1-201ENST00000261037 MOB4Q9Y3A3 225 aa10.3□□□□□ -0.76
COL8A1-201ENST00000261037 ZFC3H1O60293 1989 aaKnown RBP10.3□□□□□ -0.76
COL8A1-201ENST00000261037 NPIPB11E5RHQ5 1161 aa10.3□□□□□ -0.76
COL8A1-201ENST00000261037 LIPFP07098 398 aa10.3□□□□□ -0.76
COL8A1-201ENST00000261037 C8orf88P0DMB2 117 aa10.3□□□□□ -0.76
COL8A1-201ENST00000261037 SRIP30626 198 aa10.3□□□□□ -0.76
COL8A1-201ENST00000261037 H2BFSP57053 126 aa10.3□□□□□ -0.76
COL8A1-201ENST00000261037 ZNF385CQ66K41 422 aaPredicted RBP10.3□□□□□ -0.76
COL8A1-201ENST00000261037 CDC42EP3Q9UKI2 254 aa10.3□□□□□ -0.76
COL8A1-201ENST00000261037 RALYQ9UKM9 306 aaKnown RBP10.3□□□□□ -0.76
COL8A1-201ENST00000261037 RRHO14718 337 aa10.3□□□□□ -0.76
COL8A1-201ENST00000261037 SYNGR3O43761 229 aa10.3□□□□□ -0.76
COL8A1-201ENST00000261037 IL4P05112 153 aa10.3□□□□□ -0.76
COL8A1-201ENST00000261037 NMBP08949 121 aa10.3□□□□□ -0.76
COL8A1-201ENST00000261037 NAT1P18440 290 aa10.3□□□□□ -0.76
COL8A1-201ENST00000261037 OR4C13Q8NGP0 309 aa10.3□□□□□ -0.76
COL8A1-201ENST00000261037 GRIFINA4D1Z8 144 aa10.3□□□□□ -0.76
COL8A1-201ENST00000261037 NDUFA2O43678 99 aa10.3□□□□□ -0.76
COL8A1-201ENST00000261037 LINC00305Q7Z4B0 112 aa10.3□□□□□ -0.76
COL8A1-201ENST00000261037 SPSB2Q99619 263 aa10.3□□□□□ -0.76
COL8A1-201ENST00000261037 ZNF256Q9Y2P7 627 aaPredicted RBP10.3□□□□□ -0.76
COL8A1-201ENST00000261037 ZNF729A6NN14 1252 aaPredicted RBP10.3□□□□□ -0.76
COL8A1-201ENST00000261037 C9JCJ5 164 aa10.3□□□□□ -0.76
COL8A1-201ENST00000261037 RND3P61587 244 aa10.3□□□□□ -0.76
COL8A1-201ENST00000261037 DNASE2BQ8WZ79 361 aa10.3□□□□□ -0.76
COL8A1-201ENST00000261037 MUC21A0A0G2JKD1 596 aa10.29□□□□□ -0.76
COL8A1-201ENST00000261037 MUC21A0A140T8X8 626 aa10.29□□□□□ -0.76
COL8A1-201ENST00000261037 IFNL4K9M1U5 179 aa10.29□□□□□ -0.76
COL8A1-201ENST00000261037 CFDP00746 253 aaPredicted RBP10.29□□□□□ -0.76
COL8A1-201ENST00000261037 COTL1Q14019 142 aa10.29□□□□□ -0.76
COL8A1-201ENST00000261037 MUC21Q5SSG8 566 aa10.29□□□□□ -0.76
COL8A1-201ENST00000261037 TRAV30A0A087WSZ9 112 aa10.29□□□□□ -0.76
COL8A1-201ENST00000261037 A0A1W2PRX2 142 aa10.29□□□□□ -0.76
COL8A1-201ENST00000261037 LNP1A1A4G5 178 aa10.29□□□□□ -0.76
COL8A1-201ENST00000261037 LEPROTL1O95214 131 aa10.29□□□□□ -0.76
COL8A1-201ENST00000261037 GCGP01275 180 aa10.29□□□□□ -0.76
COL8A1-201ENST00000261037 NPPCP23582 126 aa10.29□□□□□ -0.76
COL8A1-201ENST00000261037 KLRB1Q12918 225 aa10.29□□□□□ -0.76
COL8A1-201ENST00000261037 Q5BKY6 102 aa10.29□□□□□ -0.76
COL8A1-201ENST00000261037 SAXO1Q8IYX7 474 aa10.29□□□□□ -0.76
COL8A1-201ENST00000261037 NABP2Q9BQ15 211 aa10.29□□□□□ -0.76
COL8A1-201ENST00000261037 IGHV3OR16-8A0A075B7F1 116 aa10.29□□□□□ -0.76
COL8A1-201ENST00000261037 PPP1R17O96001 155 aa10.29□□□□□ -0.76
COL8A1-201ENST00000261037 SCGB1A1P11684 91 aa10.29□□□□□ -0.76
COL8A1-201ENST00000261037 MEIG1Q5JSS6 88 aa10.29□□□□□ -0.76
COL8A1-201ENST00000261037 SCN10AQ9Y5Y9 1956 aa10.29□□□□□ -0.76
COL8A1-201ENST00000261037 TRGV3P03979 118 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms