RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 HPRT1P00492 218 aa12.64□□□□□ -0.39
CCDC90B-201ENST00000260054 TMEM11P17152 192 aa12.64□□□□□ -0.39
CCDC90B-201ENST00000260054 CNTFRP26992 372 aa12.64□□□□□ -0.39
CCDC90B-201ENST00000260054 RPS16P62249 146 aaKnown RBP12.64□□□□□ -0.39
CCDC90B-201ENST00000260054 ANKRD55Q3KP44 614 aa12.64□□□□□ -0.39
CCDC90B-201ENST00000260054 TMEM219Q86XT9 240 aa12.64□□□□□ -0.39
CCDC90B-201ENST00000260054 HARBI1Q96MB7 349 aa12.64□□□□□ -0.39
CCDC90B-201ENST00000260054 SLA2Q9H6Q3 261 aa12.64□□□□□ -0.39
CCDC90B-201ENST00000260054 PLEKHA2Q9HB19 425 aa12.64□□□□□ -0.39
CCDC90B-201ENST00000260054 TNFRSF19Q9NS68 423 aa12.64□□□□□ -0.39
CCDC90B-201ENST00000260054 A6NDX4 124 aa12.63□□□□□ -0.39
CCDC90B-201ENST00000260054 SHOXO15266 292 aa12.63□□□□□ -0.39
CCDC90B-201ENST00000260054 CDS2O95674 445 aa12.63□□□□□ -0.39
CCDC90B-201ENST00000260054 DHFRP00374 187 aa12.63□□□□□ -0.39
CCDC90B-201ENST00000260054 IGLV2-23P01705 113 aa12.63□□□□□ -0.39
CCDC90B-201ENST00000260054 IL5P05113 134 aa12.63□□□□□ -0.39
CCDC90B-201ENST00000260054 ANXA3P12429 323 aa12.63□□□□□ -0.39
CCDC90B-201ENST00000260054 F2RL1P55085 397 aa12.63□□□□□ -0.39
CCDC90B-201ENST00000260054 C11orf88Q6PI97 169 aa12.63□□□□□ -0.39
CCDC90B-201ENST00000260054 RBMS3Q6XE24 437 aaKnown RBP12.63□□□□□ -0.39
CCDC90B-201ENST00000260054 LIAT1Q6ZQX7 453 aa12.63□□□□□ -0.39
CCDC90B-201ENST00000260054 VKORC1L1Q8N0U8 176 aa12.63□□□□□ -0.39
CCDC90B-201ENST00000260054 OSR1Q8TAX0 266 aaPredicted RBP12.63□□□□□ -0.39
CCDC90B-201ENST00000260054 ST6GAL2Q96JF0 529 aa12.63□□□□□ -0.39
CCDC90B-201ENST00000260054 DUX5Q96PT3 197 aa12.63□□□□□ -0.39
CCDC90B-201ENST00000260054 PRAF2O60831 178 aa12.62□□□□□ -0.39
CCDC90B-201ENST00000260054 DUS4LO95620 317 aaKnown RBP12.62□□□□□ -0.39
CCDC90B-201ENST00000260054 TATDN3Q17R31 274 aa12.62□□□□□ -0.39
CCDC90B-201ENST00000260054 OR5R1Q8NH85 324 aa12.62□□□□□ -0.39
CCDC90B-201ENST00000260054 ZNF431Q8TF32 576 aaPredicted RBP12.62□□□□□ -0.39
CCDC90B-201ENST00000260054 TMEM56Q96MV1 263 aa12.62□□□□□ -0.39
CCDC90B-201ENST00000260054 RNF5Q99942 180 aa12.62□□□□□ -0.39
CCDC90B-201ENST00000260054 ESM1Q9NQ30 184 aa12.62□□□□□ -0.39
CCDC90B-201ENST00000260054 PLSCR3Q9NRY6 295 aa12.62□□□□□ -0.39
CCDC90B-201ENST00000260054 TMEM56-RWDD3S4R434 201 aa12.62□□□□□ -0.39
CCDC90B-201ENST00000260054 BTBD17A6NE02 478 aa12.61□□□□□ -0.39
CCDC90B-201ENST00000260054 RPA2P15927 270 aa12.61□□□□□ -0.39
CCDC90B-201ENST00000260054 MMDQ15546 238 aa12.61□□□□□ -0.39
CCDC90B-201ENST00000260054 LIN54Q6MZP7 749 aa12.61□□□□□ -0.39
CCDC90B-201ENST00000260054 SELENOHQ8IZQ5 122 aaKnown RBP12.61□□□□□ -0.39
CCDC90B-201ENST00000260054 GRPEL2Q8TAA5 225 aa12.61□□□□□ -0.39
CCDC90B-201ENST00000260054 R3HDM4Q96D70 268 aa12.61□□□□□ -0.39
CCDC90B-201ENST00000260054 RBM14Q96PK6 669 aaKnown RBP12.61□□□□□ -0.39
CCDC90B-201ENST00000260054 COMMD9Q9P000 198 aa12.61□□□□□ -0.39
CCDC90B-201ENST00000260054 VPREB3Q9UKI3 123 aa12.61□□□□□ -0.39
CCDC90B-201ENST00000260054 POMT1Q9Y6A1 747 aa12.61□□□□□ -0.39
CCDC90B-201ENST00000260054 DNAJC9-AS1A6NH13 148 aa12.61□□□□□ -0.39
CCDC90B-201ENST00000260054 MARCH11A6NNE9 402 aa12.61□□□□□ -0.39
CCDC90B-201ENST00000260054 KRASP01116 189 aa12.61□□□□□ -0.39
CCDC90B-201ENST00000260054 SAA1P0DJI8 122 aaPredicted RBP12.61□□□□□ -0.39
CCDC90B-201ENST00000260054 NQO2P16083 231 aa12.61□□□□□ -0.39
CCDC90B-201ENST00000260054 G6PCP35575 357 aa12.61□□□□□ -0.39
CCDC90B-201ENST00000260054 LGALS7P47929 136 aa12.61□□□□□ -0.39
CCDC90B-201ENST00000260054 TMEM268Q5VZI3 342 aa12.61□□□□□ -0.39
CCDC90B-201ENST00000260054 SSX9Q7RTT3 188 aa12.61□□□□□ -0.39
CCDC90B-201ENST00000260054 ZNF695Q8IW36 515 aa12.61□□□□□ -0.39
CCDC90B-201ENST00000260054 LGI3Q8N145 548 aa12.61□□□□□ -0.39
CCDC90B-201ENST00000260054 NPBQ8NG41 125 aa12.61□□□□□ -0.39
CCDC90B-201ENST00000260054 ZNF418Q8TF45 676 aaPredicted RBP12.61□□□□□ -0.39
CCDC90B-201ENST00000260054 MITD1Q8WV92 249 aa12.61□□□□□ -0.39
CCDC90B-201ENST00000260054 RBPMSQ93062 196 aaKnown RBP12.61□□□□□ -0.39
CCDC90B-201ENST00000260054 SEC22AQ96IW7 307 aa12.61□□□□□ -0.39
CCDC90B-201ENST00000260054 RHOVQ96L33 236 aa12.61□□□□□ -0.39
CCDC90B-201ENST00000260054 SLC25A33Q9BSK2 321 aa12.61□□□□□ -0.39
CCDC90B-201ENST00000260054 CHIAQ9BZP6 476 aa12.61□□□□□ -0.39
CCDC90B-201ENST00000260054 PITPNC1Q9UKF7 332 aa12.61□□□□□ -0.39
CCDC90B-201ENST00000260054 A0A0A6YYJ9 748 aa12.6□□□□□ -0.39
CCDC90B-201ENST00000260054 C7orf66A4D0T2 115 aa12.6□□□□□ -0.39
CCDC90B-201ENST00000260054 NBR2O15453 112 aa12.6□□□□□ -0.39
CCDC90B-201ENST00000260054 SLC25A17O43808 307 aa12.6□□□□□ -0.39
CCDC90B-201ENST00000260054 CHST1O43916 411 aa12.6□□□□□ -0.39
CCDC90B-201ENST00000260054 OR2F2O95006 317 aa12.6□□□□□ -0.39
CCDC90B-201ENST00000260054 NDUFA3O95167 84 aa12.6□□□□□ -0.39
CCDC90B-201ENST00000260054 HRASP01112 189 aa12.6□□□□□ -0.39
CCDC90B-201ENST00000260054 IGKV1-5P01602 117 aa12.6□□□□□ -0.39
CCDC90B-201ENST00000260054 HILS1P60008 231 aa12.6□□□□□ -0.39
CCDC90B-201ENST00000260054 SRPXP78539 464 aa12.6□□□□□ -0.39
CCDC90B-201ENST00000260054 PSG5Q15238 335 aa12.6□□□□□ -0.39
CCDC90B-201ENST00000260054 TMEM86BQ8N661 226 aa12.6□□□□□ -0.39
CCDC90B-201ENST00000260054 SLC35G3Q8N808 338 aa12.6□□□□□ -0.39
CCDC90B-201ENST00000260054 LRTM2Q8N967 370 aa12.6□□□□□ -0.39
CCDC90B-201ENST00000260054 IL22RA2Q969J5 263 aa12.6□□□□□ -0.39
CCDC90B-201ENST00000260054 TSNAXQ99598 290 aaKnown RBP12.6□□□□□ -0.39
CCDC90B-201ENST00000260054 GPN1Q9HCN4 374 aaPredicted RBP12.6□□□□□ -0.39
CCDC90B-201ENST00000260054 ALG5Q9Y673 324 aa12.6□□□□□ -0.39
CCDC90B-201ENST00000260054 A0A0G2JRQ6 117 aa12.59□□□□□ -0.39
CCDC90B-201ENST00000260054 NCBP2LA6PVI3 153 aaKnown RBP12.59□□□□□ -0.39
CCDC90B-201ENST00000260054 SNRPGP15A8MWD9 76 aa12.59□□□□□ -0.39
CCDC90B-201ENST00000260054 CREBL2O60519 120 aaPredicted RBP12.59□□□□□ -0.39
CCDC90B-201ENST00000260054 POU2AF1Q16633 256 aa12.59□□□□□ -0.39
CCDC90B-201ENST00000260054 LYZL2Q7Z4W2 148 aa12.59□□□□□ -0.39
CCDC90B-201ENST00000260054 Q8N9W7 124 aa12.59□□□□□ -0.39
CCDC90B-201ENST00000260054 DMBX1Q8NFW5 382 aa12.59□□□□□ -0.39
CCDC90B-201ENST00000260054 COQ8AQ8NI60 647 aa12.59□□□□□ -0.39
CCDC90B-201ENST00000260054 FBXL15Q9H469 300 aa12.59□□□□□ -0.39
CCDC90B-201ENST00000260054 TPSG1Q9NRR2 321 aa12.59□□□□□ -0.39
CCDC90B-201ENST00000260054 RRHO14718 337 aa12.58□□□□□ -0.4
CCDC90B-201ENST00000260054 SPDEFO95238 335 aa12.58□□□□□ -0.4
CCDC90B-201ENST00000260054 CRYGBP07316 175 aa12.58□□□□□ -0.4
CCDC90B-201ENST00000260054 UBE2KP61086 200 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms