RNA–Protein interactions for RNA: ENST00000259951.11

HLA-F-216, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS P4 BASIC

Gene HLA-F, Length 1,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-216ENST00000259951 Q6ZRM9 215 aa13.57□□□□□ -0.24
HLA-F-216ENST00000259951 ACOT7LQ6ZUV0 252 aa13.57□□□□□ -0.24
HLA-F-216ENST00000259951 OR4C13Q8NGP0 309 aa13.57□□□□□ -0.24
HLA-F-216ENST00000259951 FLYWCH2Q96CP2 140 aaKnown RBP13.57□□□□□ -0.24
HLA-F-216ENST00000259951 C1orf159Q96HA4 380 aa13.57□□□□□ -0.24
HLA-F-216ENST00000259951 MINOS1-NBL1R4GNA1 71 aa13.57□□□□□ -0.24
HLA-F-216ENST00000259951 ABCA12Q86UK0 2595 aa13.57□□□□□ -0.24
HLA-F-216ENST00000259951 OOSP1A8MZH6 123 aa13.57□□□□□ -0.24
HLA-F-216ENST00000259951 RNASEK-C17orf49H0YIS7 233 aa13.57□□□□□ -0.24
HLA-F-216ENST00000259951 GATA3P23771 443 aa13.57□□□□□ -0.24
HLA-F-216ENST00000259951 UBE2E1P51965 193 aa13.57□□□□□ -0.24
HLA-F-216ENST00000259951 DIAPH2-AS1Q14236 149 aa13.57□□□□□ -0.24
HLA-F-216ENST00000259951 IZUMO4Q1ZYL8 232 aa13.57□□□□□ -0.24
HLA-F-216ENST00000259951 TMEM177Q53S58 311 aa13.57□□□□□ -0.24
HLA-F-216ENST00000259951 CXorf66Q5JRM2 361 aaPredicted RBP13.57□□□□□ -0.24
HLA-F-216ENST00000259951 OR8H3Q8N146 312 aa13.57□□□□□ -0.24
HLA-F-216ENST00000259951 RHOVQ96L33 236 aa13.57□□□□□ -0.24
HLA-F-216ENST00000259951 TBX15Q96SF7 602 aa13.57□□□□□ -0.24
HLA-F-216ENST00000259951 OR5AC2Q9NZP5 309 aa13.57□□□□□ -0.24
HLA-F-216ENST00000259951 TBL2Q9Y4P3 447 aaKnown RBP13.57□□□□□ -0.24
HLA-F-216ENST00000259951 ABCA2Q9BZC7 2435 aa13.56□□□□□ -0.24
HLA-F-216ENST00000259951 TRAV20A0A0B4J274 112 aa13.56□□□□□ -0.24
HLA-F-216ENST00000259951 IGHV1-3A0A0C4DH29 117 aa13.56□□□□□ -0.24
HLA-F-216ENST00000259951 SHOXO15266 292 aa13.56□□□□□ -0.24
HLA-F-216ENST00000259951 RBMXL2O75526 392 aaKnown RBP13.56□□□□□ -0.24
HLA-F-216ENST00000259951 MED6O75586 246 aa13.56□□□□□ -0.24
HLA-F-216ENST00000259951 CXCL2P19875 107 aa13.56□□□□□ -0.24
HLA-F-216ENST00000259951 MIDNQ504T8 468 aa13.56□□□□□ -0.24
HLA-F-216ENST00000259951 CCDC144NLQ6NUI1 221 aa13.56□□□□□ -0.24
HLA-F-216ENST00000259951 MOB3BQ86TA1 216 aa13.56□□□□□ -0.24
HLA-F-216ENST00000259951 TMEM140Q9NV12 185 aa13.56□□□□□ -0.24
HLA-F-216ENST00000259951 RCL1Q9Y2P8 373 aaKnown RBP13.56□□□□□ -0.24
HLA-F-216ENST00000259951 IGKV1-16P04430 117 aa13.55□□□□□ -0.24
HLA-F-216ENST00000259951 S100A11P31949 105 aa13.55□□□□□ -0.24
HLA-F-216ENST00000259951 VAMP2P63027 116 aa13.55□□□□□ -0.24
HLA-F-216ENST00000259951 SSX9Q7RTT3 188 aa13.55□□□□□ -0.24
HLA-F-216ENST00000259951 LINC01356Q8N9X3 169 aa13.55□□□□□ -0.24
HLA-F-216ENST00000259951 OR4A16Q8NH70 328 aa13.55□□□□□ -0.24
HLA-F-216ENST00000259951 HARBI1Q96MB7 349 aa13.55□□□□□ -0.24
HLA-F-216ENST00000259951 PLSCR3Q9NRY6 295 aa13.55□□□□□ -0.24
HLA-F-216ENST00000259951 PAIP2BQ9ULR5 123 aaKnown RBP13.55□□□□□ -0.24
HLA-F-216ENST00000259951 BOLA1Q9Y3E2 137 aa13.55□□□□□ -0.24
HLA-F-216ENST00000259951 POLQO75417 2590 aa13.54□□□□□ -0.24
HLA-F-216ENST00000259951 A0A096LNT2 108 aa13.54□□□□□ -0.24
HLA-F-216ENST00000259951 P2RY1P47900 373 aa13.54□□□□□ -0.24
HLA-F-216ENST00000259951 POLR2GP62487 172 aaKnown RBP eCLIP13.54□□□□□ -0.24
HLA-F-216ENST00000259951 TMUB2Q71RG4 321 aa13.54□□□□□ -0.24
HLA-F-216ENST00000259951 KCNRGQ8N5I3 272 aa13.54□□□□□ -0.24
HLA-F-216ENST00000259951 AQP10Q96PS8 301 aa13.54□□□□□ -0.24
HLA-F-216ENST00000259951 RAB40CQ96S21 281 aa13.54□□□□□ -0.24
HLA-F-216ENST00000259951 REG4Q9BYZ8 158 aa13.54□□□□□ -0.24
HLA-F-216ENST00000259951 ARL6Q9H0F7 186 aa13.54□□□□□ -0.24
HLA-F-216ENST00000259951 FBN2P35556 2912 aa13.54□□□□□ -0.24
HLA-F-216ENST00000259951 SYNGR2O43760 224 aa13.53□□□□□ -0.24
HLA-F-216ENST00000259951 SSSCA1O60232 199 aa13.53□□□□□ -0.24
HLA-F-216ENST00000259951 GPR137BO60478 399 aa13.53□□□□□ -0.24
HLA-F-216ENST00000259951 LGALS7P47929 136 aa13.53□□□□□ -0.24
HLA-F-216ENST00000259951 AP2S1P53680 142 aaPredicted RBP13.53□□□□□ -0.24
HLA-F-216ENST00000259951 RPS16P62249 146 aaKnown RBP13.53□□□□□ -0.24
HLA-F-216ENST00000259951 GPR157Q5UAW9 335 aa13.53□□□□□ -0.24
HLA-F-216ENST00000259951 OR4A47Q6IF82 309 aa13.53□□□□□ -0.24
HLA-F-216ENST00000259951 VSTM2AQ8TAG5 236 aa13.53□□□□□ -0.24
HLA-F-216ENST00000259951 GON7Q9BXV9 100 aa13.53□□□□□ -0.24
HLA-F-216ENST00000259951 MS4A7Q9GZW8 240 aaPredicted RBP13.53□□□□□ -0.24
HLA-F-216ENST00000259951 MAGT1Q9H0U3 335 aa13.53□□□□□ -0.24
HLA-F-216ENST00000259951 ZC4H2Q9NQZ6 224 aa13.53□□□□□ -0.24
HLA-F-216ENST00000259951 HSPB7Q9UBY9 170 aa13.53□□□□□ -0.24
HLA-F-216ENST00000259951 AUP1Q9Y679 476 aa13.53□□□□□ -0.24
HLA-F-216ENST00000259951 CREBBPQ92793 2442 aa13.53□□□□□ -0.24
HLA-F-216ENST00000259951 A0A1W2PPI3 338 aa13.53□□□□□ -0.24
HLA-F-216ENST00000259951 RNF222A6NCQ9 220 aa13.53□□□□□ -0.24
HLA-F-216ENST00000259951 CHST1O43916 411 aa13.53□□□□□ -0.24
HLA-F-216ENST00000259951 LY86O95711 162 aa13.53□□□□□ -0.24
HLA-F-216ENST00000259951 OR9G9P0C7N8 305 aa13.53□□□□□ -0.24
HLA-F-216ENST00000259951 RPL12P30050 165 aaKnown RBP13.53□□□□□ -0.24
HLA-F-216ENST00000259951 TNFRSF9Q07011 255 aa13.53□□□□□ -0.24
HLA-F-216ENST00000259951 OPCMLQ14982 345 aa13.53□□□□□ -0.24
HLA-F-216ENST00000259951 AARDQ4LEZ3 155 aa13.53□□□□□ -0.24
HLA-F-216ENST00000259951 PDZD9Q8IXQ8 264 aa13.53□□□□□ -0.24
HLA-F-216ENST00000259951 VKORC1L1Q8N0U8 176 aa13.53□□□□□ -0.24
HLA-F-216ENST00000259951 RNF5Q99942 180 aa13.53□□□□□ -0.24
HLA-F-216ENST00000259951 BET1LQ9NYM9 111 aa13.53□□□□□ -0.24
HLA-F-216ENST00000259951 KANTRA0A1W2PQU2 76 aa13.52□□□□□ -0.25
HLA-F-216ENST00000259951 A0A1W2PRD5 423 aa13.52□□□□□ -0.25
HLA-F-216ENST00000259951 A0A1W2PRF3 423 aa13.52□□□□□ -0.25
HLA-F-216ENST00000259951 A0A1W2PRM7 423 aa13.52□□□□□ -0.25
HLA-F-216ENST00000259951 RNF223E7ERA6 249 aa13.52□□□□□ -0.25
HLA-F-216ENST00000259951 NXPH3O95157 252 aa13.52□□□□□ -0.25
HLA-F-216ENST00000259951 CD1BP29016 333 aa13.52□□□□□ -0.25
HLA-F-216ENST00000259951 RPL23AP62750 156 aaKnown RBP13.52□□□□□ -0.25
HLA-F-216ENST00000259951 RELBQ01201 579 aa13.52□□□□□ -0.25
HLA-F-216ENST00000259951 VMA21Q3ZAQ7 101 aa13.52□□□□□ -0.25
HLA-F-216ENST00000259951 ZNF429Q86V71 674 aa13.52□□□□□ -0.25
HLA-F-216ENST00000259951 OR52E5Q8NH55 327 aa13.52□□□□□ -0.25
HLA-F-216ENST00000259951 OR4A5Q8NH83 315 aa13.52□□□□□ -0.25
HLA-F-216ENST00000259951 MALSU1Q96EH3 234 aa13.52□□□□□ -0.25
HLA-F-216ENST00000259951 SLC25A31Q9H0C2 315 aa13.52□□□□□ -0.25
HLA-F-216ENST00000259951 SLA2Q9H6Q3 261 aa13.52□□□□□ -0.25
HLA-F-216ENST00000259951 PRNDQ9UKY0 176 aa13.52□□□□□ -0.25
HLA-F-216ENST00000259951 HILPDAQ9Y5L2 63 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms