RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 KRASP01116 189 aa14.19□□□□□ -0.14
SRSF1-201ENST00000258962 RBP4P02753 201 aa14.19□□□□□ -0.14
SRSF1-201ENST00000258962 HKR1P10072 659 aa14.19□□□□□ -0.14
SRSF1-201ENST00000258962 THBS3P49746 956 aa14.19□□□□□ -0.14
SRSF1-201ENST00000258962 DLX1P56177 255 aa14.19□□□□□ -0.14
SRSF1-201ENST00000258962 GPR157Q5UAW9 335 aa14.19□□□□□ -0.14
SRSF1-201ENST00000258962 CD300LFQ8TDQ1 290 aa14.19□□□□□ -0.14
SRSF1-201ENST00000258962 ZNF471Q9BX82 626 aaPredicted RBP14.19□□□□□ -0.14
SRSF1-201ENST00000258962 TMEM133Q9H2Q1 129 aa14.19□□□□□ -0.14
SRSF1-201ENST00000258962 CDC42EP3Q9UKI2 254 aa14.19□□□□□ -0.14
SRSF1-201ENST00000258962 TRAV20A0A0B4J274 112 aa14.18□□□□□ -0.14
SRSF1-201ENST00000258962 A0A1W2PPH5 198 aa14.18□□□□□ -0.14
SRSF1-201ENST00000258962 NXPH3O95157 252 aa14.18□□□□□ -0.14
SRSF1-201ENST00000258962 TPT1P13693 172 aaKnown RBP14.18□□□□□ -0.14
SRSF1-201ENST00000258962 HNF1AP20823 631 aa14.18□□□□□ -0.14
SRSF1-201ENST00000258962 POLR2GP62487 172 aaKnown RBP eCLIP14.18□□□□□ -0.14
SRSF1-201ENST00000258962 OR9G1Q8NH87 305 aa14.18□□□□□ -0.14
SRSF1-201ENST00000258962 ST8SIA2Q92186 375 aa14.18□□□□□ -0.14
SRSF1-201ENST00000258962 TMEM186Q96B77 213 aa14.18□□□□□ -0.14
SRSF1-201ENST00000258962 S1PR3Q99500 378 aa14.18□□□□□ -0.14
SRSF1-201ENST00000258962 MAGT1Q9H0U3 335 aa14.18□□□□□ -0.14
SRSF1-201ENST00000258962 HIF1ANQ9NWT6 349 aa14.18□□□□□ -0.14
SRSF1-201ENST00000258962 PRELID3BQ9Y3B1 194 aa14.18□□□□□ -0.14
SRSF1-201ENST00000258962 LOC105371242A0A075B767 164 aa14.17□□□□□ -0.14
SRSF1-201ENST00000258962 LINC00862A6NCI5 91 aa14.17□□□□□ -0.14
SRSF1-201ENST00000258962 LIPFP07098 398 aa14.17□□□□□ -0.14
SRSF1-201ENST00000258962 CT45A6P0DMU7 189 aa14.17□□□□□ -0.14
SRSF1-201ENST00000258962 CT45A5P0DMU8 189 aa14.17□□□□□ -0.14
SRSF1-201ENST00000258962 CT45A7P0DMV0 189 aa14.17□□□□□ -0.14
SRSF1-201ENST00000258962 MMP9P14780 707 aa14.17□□□□□ -0.14
SRSF1-201ENST00000258962 HOXB4P17483 251 aaPredicted RBP14.17□□□□□ -0.14
SRSF1-201ENST00000258962 RPL12P30050 165 aaKnown RBP14.17□□□□□ -0.14
SRSF1-201ENST00000258962 KIR2DS2P43631 304 aa14.17□□□□□ -0.14
SRSF1-201ENST00000258962 P2RY1P47900 373 aa14.17□□□□□ -0.14
SRSF1-201ENST00000258962 MIDNQ504T8 468 aa14.17□□□□□ -0.14
SRSF1-201ENST00000258962 EIF5AL1Q6IS14 154 aaKnown RBP14.17□□□□□ -0.14
SRSF1-201ENST00000258962 ABHD12Q8N2K0 398 aa14.17□□□□□ -0.14
SRSF1-201ENST00000258962 LRRC20Q8TCA0 184 aa14.17□□□□□ -0.14
SRSF1-201ENST00000258962 ADTRPQ96IZ2 230 aa14.17□□□□□ -0.14
SRSF1-201ENST00000258962 FOXH1O75593 365 aa14.16□□□□□ -0.14
SRSF1-201ENST00000258962 HPRT1P00492 218 aa14.16□□□□□ -0.14
SRSF1-201ENST00000258962 ZNF137PP52743 207 aa14.16□□□□□ -0.14
SRSF1-201ENST00000258962 PRB3Q04118 309 aaPredicted RBP14.16□□□□□ -0.14
SRSF1-201ENST00000258962 FAM120AOSQ5T036 256 aa14.16□□□□□ -0.14
SRSF1-201ENST00000258962 Q8N7P7 452 aa14.16□□□□□ -0.14
SRSF1-201ENST00000258962 STOML3Q8TAV4 291 aa14.16□□□□□ -0.14
SRSF1-201ENST00000258962 ST6GALNAC6Q969X2 333 aa14.16□□□□□ -0.14
SRSF1-201ENST00000258962 R3HDM4Q96D70 268 aa14.16□□□□□ -0.14
SRSF1-201ENST00000258962 SLC25A32Q9H2D1 315 aa14.16□□□□□ -0.14
SRSF1-201ENST00000258962 COA4Q9NYJ1 87 aa14.16□□□□□ -0.14
SRSF1-201ENST00000258962 ONECUT1Q9UBC0 465 aa14.16□□□□□ -0.14
SRSF1-201ENST00000258962 ABCA2Q9BZC7 2435 aa14.16□□□□□ -0.14
SRSF1-201ENST00000258962 NAV3Q8IVL0 2385 aa14.16□□□□□ -0.14
SRSF1-201ENST00000258962 IGHV2-26A0A0B4J1V2 119 aa14.15□□□□□ -0.14
SRSF1-201ENST00000258962 MARCH11A6NNE9 402 aa14.15□□□□□ -0.14
SRSF1-201ENST00000258962 SSSCA1O60232 199 aa14.15□□□□□ -0.14
SRSF1-201ENST00000258962 SPDEFO95238 335 aa14.15□□□□□ -0.14
SRSF1-201ENST00000258962 LCN2P80188 198 aa14.15□□□□□ -0.14
SRSF1-201ENST00000258962 OR10X1Q8NGY0 326 aa14.15□□□□□ -0.14
SRSF1-201ENST00000258962 OR4S2Q8NH73 311 aa14.15□□□□□ -0.14
SRSF1-201ENST00000258962 RBMXL1Q96E39 390 aaKnown RBP14.15□□□□□ -0.14
SRSF1-201ENST00000258962 MRPL20Q9BYC9 149 aaKnown RBP14.15□□□□□ -0.14
SRSF1-201ENST00000258962 WRBO00258 174 aa14.15□□□□□ -0.14
SRSF1-201ENST00000258962 GPR137BO60478 399 aa14.15□□□□□ -0.14
SRSF1-201ENST00000258962 TMEM50AO95807 157 aa14.15□□□□□ -0.14
SRSF1-201ENST00000258962 IGLV1-47P01700 117 aa14.15□□□□□ -0.14
SRSF1-201ENST00000258962 ZFP36P26651 326 aaKnown RBP14.15□□□□□ -0.14
SRSF1-201ENST00000258962 VAMP2P63027 116 aa14.15□□□□□ -0.14
SRSF1-201ENST00000258962 DIAPH2-AS1Q14236 149 aa14.15□□□□□ -0.14
SRSF1-201ENST00000258962 FAM71F2Q6NXP2 309 aa14.15□□□□□ -0.14
SRSF1-201ENST00000258962 CYTL1Q9NRR1 136 aa14.15□□□□□ -0.14
SRSF1-201ENST00000258962 ZFHX3Q15911 3703 aa14.14□□□□□ -0.15
SRSF1-201ENST00000258962 CRYZL1O95825 349 aa14.14□□□□□ -0.15
SRSF1-201ENST00000258962 PAX9P55771 341 aa14.14□□□□□ -0.15
SRSF1-201ENST00000258962 ALKAL2Q6UX46 152 aa14.14□□□□□ -0.15
SRSF1-201ENST00000258962 H2BFWTQ7Z2G1 175 aa14.14□□□□□ -0.15
SRSF1-201ENST00000258962 BAP18Q8IXM2 172 aa14.14□□□□□ -0.15
SRSF1-201ENST00000258962 PDZD9Q8IXQ8 264 aa14.14□□□□□ -0.15
SRSF1-201ENST00000258962 TNFRSF14Q92956 283 aa14.14□□□□□ -0.15
SRSF1-201ENST00000258962 SLC25A31Q9H0C2 315 aa14.14□□□□□ -0.15
SRSF1-201ENST00000258962 WNK2Q9Y3S1 2297 aa14.14□□□□□ -0.15
SRSF1-201ENST00000258962 JMJD1CQ15652 2540 aa14.13□□□□□ -0.15
SRSF1-201ENST00000258962 A8MXK9 166 aa14.13□□□□□ -0.15
SRSF1-201ENST00000258962 M0R1W7 72 aa14.13□□□□□ -0.15
SRSF1-201ENST00000258962 TOR1AO14656 332 aa14.13□□□□□ -0.15
SRSF1-201ENST00000258962 CHST1O43916 411 aa14.13□□□□□ -0.15
SRSF1-201ENST00000258962 JTBO76095 146 aa14.13□□□□□ -0.15
SRSF1-201ENST00000258962 OR9G9P0C7N8 305 aa14.13□□□□□ -0.15
SRSF1-201ENST00000258962 REG1BP48304 166 aa14.13□□□□□ -0.15
SRSF1-201ENST00000258962 ARF6P62330 175 aa14.13□□□□□ -0.15
SRSF1-201ENST00000258962 PAX2Q02962 417 aa14.13□□□□□ -0.15
SRSF1-201ENST00000258962 VKORC1L1Q8N0U8 176 aa14.13□□□□□ -0.15
SRSF1-201ENST00000258962 BSCL2Q96G97 398 aaPredicted RBP14.13□□□□□ -0.15
SRSF1-201ENST00000258962 NABP2Q9BQ15 211 aa14.13□□□□□ -0.15
SRSF1-201ENST00000258962 CLEC7AQ9BXN2 247 aa14.13□□□□□ -0.15
SRSF1-201ENST00000258962 SLC35D1Q9NTN3 355 aa14.13□□□□□ -0.15
SRSF1-201ENST00000258962 NF1P21359 2839 aa14.13□□□□□ -0.15
SRSF1-201ENST00000258962 TET2Q6N021 2002 aaPredicted RBP14.12□□□□□ -0.15
SRSF1-201ENST00000258962 BORCS7-ASMTA0A0B4J1R7 106 aa14.12□□□□□ -0.15
SRSF1-201ENST00000258962 hCG_1809904A0A1W2PP81 198 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms