RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 Q56UQ5 140 aa6.5□□□□□ -1.37
GPNMB-201ENST00000258733 ADGRE4PQ86SQ3 457 aa6.5□□□□□ -1.37
GPNMB-201ENST00000258733 PRR22Q8IZ63 422 aa6.5□□□□□ -1.37
GPNMB-201ENST00000258733 TMEM86AQ8N2M4 240 aa6.5□□□□□ -1.37
GPNMB-201ENST00000258733 IL17DQ8TAD2 202 aa6.5□□□□□ -1.37
GPNMB-201ENST00000258733 PRELID3AQ96N28 172 aa6.5□□□□□ -1.37
GPNMB-201ENST00000258733 BCL2L10Q9HD36 194 aa6.5□□□□□ -1.37
GPNMB-201ENST00000258733 C1orf123Q9NWV4 160 aa6.5□□□□□ -1.37
GPNMB-201ENST00000258733 TMED7Q9Y3B3 224 aa6.5□□□□□ -1.37
GPNMB-201ENST00000258733 APOMO95445 188 aa6.5□□□□□ -1.37
GPNMB-201ENST00000258733 ITGBL1O95965 494 aaPredicted RBP6.5□□□□□ -1.37
GPNMB-201ENST00000258733 TIMP1P01033 207 aa6.5□□□□□ -1.37
GPNMB-201ENST00000258733 HLA-DQA2P01906 255 aa6.5□□□□□ -1.37
GPNMB-201ENST00000258733 MYOD1P15172 320 aa6.5□□□□□ -1.37
GPNMB-201ENST00000258733 ACVRL1P37023 503 aa6.5□□□□□ -1.37
GPNMB-201ENST00000258733 ID3Q02535 119 aa6.5□□□□□ -1.37
GPNMB-201ENST00000258733 IL15RAQ13261 267 aa6.5□□□□□ -1.37
GPNMB-201ENST00000258733 TCF23Q7RTU1 214 aa6.5□□□□□ -1.37
GPNMB-201ENST00000258733 C1QL2Q7Z5L3 287 aa6.5□□□□□ -1.37
GPNMB-201ENST00000258733 GMPPAQ96IJ6 420 aaPredicted RBP6.5□□□□□ -1.37
GPNMB-201ENST00000258733 SMIM7Q9BQ49 75 aa6.5□□□□□ -1.37
GPNMB-201ENST00000258733 CISD1Q9NZ45 108 aaKnown RBP6.5□□□□□ -1.37
GPNMB-201ENST00000258733 NUDT4Q9NZJ9 180 aa6.5□□□□□ -1.37
GPNMB-201ENST00000258733 CCNL1Q9UK58 526 aaPredicted RBP6.5□□□□□ -1.37
GPNMB-201ENST00000258733 NLRC5Q86WI3 1866 aa6.5□□□□□ -1.37
GPNMB-201ENST00000258733 A0A1W2PS18 150 aa6.49□□□□□ -1.37
GPNMB-201ENST00000258733 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.49□□□□□ -1.37
GPNMB-201ENST00000258733 CR2P20023 1033 aa6.49□□□□□ -1.37
GPNMB-201ENST00000258733 PPP1CAP62136 330 aa6.49□□□□□ -1.37
GPNMB-201ENST00000258733 PPP1CBP62140 327 aa6.49□□□□□ -1.37
GPNMB-201ENST00000258733 RPL23P62829 140 aaKnown RBP6.49□□□□□ -1.37
GPNMB-201ENST00000258733 GGTLC2Q14390 218 aa6.49□□□□□ -1.37
GPNMB-201ENST00000258733 OXLD1Q5BKU9 147 aa6.49□□□□□ -1.37
GPNMB-201ENST00000258733 HAPLN4Q86UW8 402 aa6.49□□□□□ -1.37
GPNMB-201ENST00000258733 ZFP62Q8NB50 900 aaPredicted RBP6.49□□□□□ -1.37
GPNMB-201ENST00000258733 ZNF502Q8TBZ5 544 aa6.49□□□□□ -1.37
GPNMB-201ENST00000258733 C10orf35Q96D05 121 aa6.49□□□□□ -1.37
GPNMB-201ENST00000258733 GFI1Q99684 422 aa6.49□□□□□ -1.37
GPNMB-201ENST00000258733 MRPL32Q9BYC8 188 aaKnown RBP6.49□□□□□ -1.37
GPNMB-201ENST00000258733 PCTPQ9UKL6 214 aa6.49□□□□□ -1.37
GPNMB-201ENST00000258733 V9GY05 133 aa6.49□□□□□ -1.37
GPNMB-201ENST00000258733 HCFC1P51610 2035 aa6.49□□□□□ -1.37
GPNMB-201ENST00000258733 A0A087WV48 116 aa6.49□□□□□ -1.37
GPNMB-201ENST00000258733 A0A1W2PRD5 423 aa6.49□□□□□ -1.37
GPNMB-201ENST00000258733 A0A1W2PRF3 423 aa6.49□□□□□ -1.37
GPNMB-201ENST00000258733 A0A1W2PRM7 423 aa6.49□□□□□ -1.37
GPNMB-201ENST00000258733 ZNF840PA6NDX5 716 aa6.49□□□□□ -1.37
GPNMB-201ENST00000258733 METTL12A8MUP2 240 aa6.49□□□□□ -1.37
GPNMB-201ENST00000258733 SLC25A5P05141 298 aaKnown RBP6.49□□□□□ -1.37
GPNMB-201ENST00000258733 GABRG2P18507 467 aa6.49□□□□□ -1.37
GPNMB-201ENST00000258733 CDO1Q16878 200 aa6.49□□□□□ -1.37
GPNMB-201ENST00000258733 OTPQ5XKR4 325 aa6.49□□□□□ -1.37
GPNMB-201ENST00000258733 DMKNQ6E0U4 476 aaPredicted RBP6.49□□□□□ -1.37
GPNMB-201ENST00000258733 LINC00336Q6ZUF6 198 aa6.49□□□□□ -1.37
GPNMB-201ENST00000258733 PPP1R32Q7Z5V6 425 aa6.49□□□□□ -1.37
GPNMB-201ENST00000258733 LINC01555Q8NAE3 123 aa6.49□□□□□ -1.37
GPNMB-201ENST00000258733 DTWD2Q8NBA8 298 aa6.49□□□□□ -1.37
GPNMB-201ENST00000258733 C8orf44Q96CB5 159 aa6.49□□□□□ -1.37
GPNMB-201ENST00000258733 AGMATQ9BSE5 352 aa6.49□□□□□ -1.37
GPNMB-201ENST00000258733 CHST8Q9H2A9 424 aa6.49□□□□□ -1.37
GPNMB-201ENST00000258733 YTHDF2Q9Y5A9 579 aaKnown RBP6.49□□□□□ -1.37
GPNMB-201ENST00000258733 LCTP09848 1927 aa6.49□□□□□ -1.37
GPNMB-201ENST00000258733 EXPH5Q8NEV8 1989 aa6.48□□□□□ -1.37
GPNMB-201ENST00000258733 A0A0G2JMZ2 1700 aa6.48□□□□□ -1.37
GPNMB-201ENST00000258733 LRRC37A2A6NM11 1700 aa6.48□□□□□ -1.37
GPNMB-201ENST00000258733 PRSS12P56730 875 aa6.48□□□□□ -1.37
GPNMB-201ENST00000258733 SLC38A11Q08AI6 406 aa6.48□□□□□ -1.37
GPNMB-201ENST00000258733 MLF2Q15773 248 aaPredicted RBP6.48□□□□□ -1.37
GPNMB-201ENST00000258733 FAM78AQ5JUQ0 283 aa6.48□□□□□ -1.37
GPNMB-201ENST00000258733 TMEM64Q6YI46 380 aa6.48□□□□□ -1.37
GPNMB-201ENST00000258733 RNF44Q7L0R7 432 aa6.48□□□□□ -1.37
GPNMB-201ENST00000258733 STPG3Q8N7X2 389 aa6.48□□□□□ -1.37
GPNMB-201ENST00000258733 WIPF2Q8TF74 440 aaPredicted RBP6.48□□□□□ -1.37
GPNMB-201ENST00000258733 C2orf15Q8WU43 125 aaKnown RBP6.48□□□□□ -1.37
GPNMB-201ENST00000258733 RETNQ9HD89 108 aa6.48□□□□□ -1.37
GPNMB-201ENST00000258733 GNG13Q9P2W3 67 aa6.48□□□□□ -1.37
GPNMB-201ENST00000258733 FOXA2Q9Y261 457 aaPredicted RBP6.48□□□□□ -1.37
GPNMB-201ENST00000258733 GOLGB1Q14789 3259 aaKnown RBP6.48□□□□□ -1.37
GPNMB-201ENST00000258733 TRAV18A0A075B6X5 111 aa6.48□□□□□ -1.37
GPNMB-201ENST00000258733 A0A0J9YW62 118 aa6.48□□□□□ -1.37
GPNMB-201ENST00000258733 DAPL1A0PJW8 107 aa6.48□□□□□ -1.37
GPNMB-201ENST00000258733 FAM24AA6NFZ4 105 aa6.48□□□□□ -1.37
GPNMB-201ENST00000258733 TM4SF5O14894 197 aa6.48□□□□□ -1.37
GPNMB-201ENST00000258733 BCL2P10415 239 aa6.48□□□□□ -1.37
GPNMB-201ENST00000258733 NPPBP16860 134 aa6.48□□□□□ -1.37
GPNMB-201ENST00000258733 ZNF157P51786 506 aaPredicted RBP6.48□□□□□ -1.37
GPNMB-201ENST00000258733 OR1D5P58170 312 aa6.48□□□□□ -1.37
GPNMB-201ENST00000258733 LTBQ06643 244 aa6.48□□□□□ -1.37
GPNMB-201ENST00000258733 C1orf195Q5TG92 126 aa6.48□□□□□ -1.37
GPNMB-201ENST00000258733 IL17RELQ6ZVW7 336 aa6.48□□□□□ -1.37
GPNMB-201ENST00000258733 RNF144BQ7Z419 303 aa6.48□□□□□ -1.37
GPNMB-201ENST00000258733 KIR3DL3Q8N743 410 aa6.48□□□□□ -1.37
GPNMB-201ENST00000258733 LRTM2Q8N967 370 aa6.48□□□□□ -1.37
GPNMB-201ENST00000258733 SGMS2Q8NHU3 365 aa6.48□□□□□ -1.37
GPNMB-201ENST00000258733 FAM173AQ9BQD7 235 aa6.48□□□□□ -1.37
GPNMB-201ENST00000258733 SCRT2Q9NQ03 307 aa6.48□□□□□ -1.37
GPNMB-201ENST00000258733 DLL3Q9NYJ7 618 aa6.48□□□□□ -1.37
GPNMB-201ENST00000258733 ARL2-SNX15V9GYD0 113 aa6.48□□□□□ -1.37
GPNMB-201ENST00000258733 FNDC1Q4ZHG4 1894 aaPredicted RBP6.48□□□□□ -1.37
GPNMB-201ENST00000258733 CASTOR2A6NHX0 329 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms