RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 MS4A5Q9H3V2 200 aa12.47□□□□□ -0.41
DDX49-201ENST00000247003 LINC00574Q9H8X3 128 aa12.47□□□□□ -0.41
DDX49-201ENST00000247003 SLC39A9Q9NUM3 307 aa12.47□□□□□ -0.41
DDX49-201ENST00000247003 DCAF16Q9NXF7 216 aa12.47□□□□□ -0.41
DDX49-201ENST00000247003 RPUSD1Q9UJJ7 312 aaKnown RBP12.47□□□□□ -0.41
DDX49-201ENST00000247003 ZGRF1Q86YA3 2104 aa12.47□□□□□ -0.41
DDX49-201ENST00000247003 DSPP15924 2871 aaKnown RBP12.46□□□□□ -0.41
DDX49-201ENST00000247003 HRASP01112 189 aa12.46□□□□□ -0.41
DDX49-201ENST00000247003 BCL2P10415 239 aa12.46□□□□□ -0.41
DDX49-201ENST00000247003 AKR1C3P42330 323 aa12.46□□□□□ -0.41
DDX49-201ENST00000247003 RPL31P62899 125 aaKnown RBP12.46□□□□□ -0.41
DDX49-201ENST00000247003 RTL8BQ17RB0 113 aa12.46□□□□□ -0.41
DDX49-201ENST00000247003 VWC2Q2TAL6 325 aa12.46□□□□□ -0.41
DDX49-201ENST00000247003 NCMAPQ5T1S8 102 aa12.46□□□□□ -0.41
DDX49-201ENST00000247003 TGIF2LYQ8IUE0 185 aa12.46□□□□□ -0.41
DDX49-201ENST00000247003 VKORC1L1Q8N0U8 176 aa12.46□□□□□ -0.41
DDX49-201ENST00000247003 ZNF439Q8NDP4 499 aa12.46□□□□□ -0.41
DDX49-201ENST00000247003 CCL17Q92583 94 aa12.46□□□□□ -0.41
DDX49-201ENST00000247003 RAB39BQ96DA2 213 aa12.46□□□□□ -0.41
DDX49-201ENST00000247003 NIPSNAP3BQ9BS92 247 aa12.46□□□□□ -0.41
DDX49-201ENST00000247003 DSCAML1Q8TD84 2053 aa12.46□□□□□ -0.41
DDX49-201ENST00000247003 USF3Q68DE3 2245 aa12.46□□□□□ -0.42
DDX49-201ENST00000247003 TMEM178BH3BS89 294 aa12.46□□□□□ -0.42
DDX49-201ENST00000247003 CD3EP07766 207 aa12.46□□□□□ -0.42
DDX49-201ENST00000247003 PLA2G5P39877 138 aa12.46□□□□□ -0.42
DDX49-201ENST00000247003 RAB11AP62491 216 aa12.46□□□□□ -0.42
DDX49-201ENST00000247003 RELBQ01201 579 aa12.46□□□□□ -0.42
DDX49-201ENST00000247003 PDLIM3Q53GG5 364 aaPredicted RBP12.46□□□□□ -0.42
DDX49-201ENST00000247003 ETV3LQ6ZN32 361 aa12.46□□□□□ -0.42
DDX49-201ENST00000247003 SLC25A48Q6ZT89 311 aaKnown RBP12.46□□□□□ -0.42
DDX49-201ENST00000247003 ZNF429Q86V71 674 aa12.46□□□□□ -0.42
DDX49-201ENST00000247003 ZCCHC24Q8N2G6 241 aaKnown RBP12.46□□□□□ -0.42
DDX49-201ENST00000247003 CYB561D1Q8N8Q1 229 aa12.46□□□□□ -0.42
DDX49-201ENST00000247003 OR10G4Q8NGN3 311 aa12.46□□□□□ -0.42
DDX49-201ENST00000247003 RNASE6Q93091 150 aaKnown RBP12.46□□□□□ -0.42
DDX49-201ENST00000247003 ZNF714Q96N38 554 aa12.46□□□□□ -0.42
DDX49-201ENST00000247003 ZNF251Q9BRH9 671 aa12.46□□□□□ -0.42
DDX49-201ENST00000247003 NPCDR1Q9BY65 106 aa12.46□□□□□ -0.42
DDX49-201ENST00000247003 TUBA4BQ9H853 241 aa12.46□□□□□ -0.42
DDX49-201ENST00000247003 ENY2Q9NPA8 101 aa12.46□□□□□ -0.42
DDX49-201ENST00000247003 TMEM106BQ9NUM4 274 aa12.46□□□□□ -0.42
DDX49-201ENST00000247003 CISD1Q9NZ45 108 aaKnown RBP12.46□□□□□ -0.42
DDX49-201ENST00000247003 MGAQ8IWI9 3026 aa12.46□□□□□ -0.42
DDX49-201ENST00000247003 ANKRD11Q6UB99 2663 aaPredicted RBP12.45□□□□□ -0.42
DDX49-201ENST00000247003 C15orf61A6NNL5 157 aa12.45□□□□□ -0.42
DDX49-201ENST00000247003 C15orf62A8K5M9 175 aa12.45□□□□□ -0.42
DDX49-201ENST00000247003 NDUFB3O43676 98 aa12.45□□□□□ -0.42
DDX49-201ENST00000247003 SOX15O60248 233 aa12.45□□□□□ -0.42
DDX49-201ENST00000247003 ARG1P05089 322 aa12.45□□□□□ -0.42
DDX49-201ENST00000247003 FGF8P55075 233 aaPredicted RBP12.45□□□□□ -0.42
DDX49-201ENST00000247003 RPS16P62249 146 aaKnown RBP12.45□□□□□ -0.42
DDX49-201ENST00000247003 HNF4GQ14541 408 aa12.45□□□□□ -0.42
DDX49-201ENST00000247003 ZNF726P1Q15940 193 aa12.45□□□□□ -0.42
DDX49-201ENST00000247003 SMUG1Q53HV7 270 aa12.45□□□□□ -0.42
DDX49-201ENST00000247003 LRRC10Q5BKY1 277 aa12.45□□□□□ -0.42
DDX49-201ENST00000247003 FFAR4Q5NUL3 377 aa12.45□□□□□ -0.42
DDX49-201ENST00000247003 RBMS3Q6XE24 437 aaKnown RBP12.45□□□□□ -0.42
DDX49-201ENST00000247003 LHX4Q969G2 390 aa12.45□□□□□ -0.42
DDX49-201ENST00000247003 RHOVQ96L33 236 aa12.45□□□□□ -0.42
DDX49-201ENST00000247003 BSNQ9UPA5 3926 aa12.45□□□□□ -0.42
DDX49-201ENST00000247003 ACACAQ13085 2346 aa12.45□□□□□ -0.42
DDX49-201ENST00000247003 APC2O95996 2303 aa12.44□□□□□ -0.42
DDX49-201ENST00000247003 CEP295Q9C0D2 2601 aa12.44□□□□□ -0.42
DDX49-201ENST00000247003 CTXND1A0A1B0GTU2 59 aa12.44□□□□□ -0.42
DDX49-201ENST00000247003 SHISA9B4DS77 424 aa12.44□□□□□ -0.42
DDX49-201ENST00000247003 CTRB1P17538 263 aa12.44□□□□□ -0.42
DDX49-201ENST00000247003 CD1BP29016 333 aa12.44□□□□□ -0.42
DDX49-201ENST00000247003 TFF3Q07654 80 aa12.44□□□□□ -0.42
DDX49-201ENST00000247003 CTRB2Q6GPI1 263 aa12.44□□□□□ -0.42
DDX49-201ENST00000247003 OR10G9Q8NGN4 311 aa12.44□□□□□ -0.42
DDX49-201ENST00000247003 OR10G7Q8NGN6 311 aa12.44□□□□□ -0.42
DDX49-201ENST00000247003 H1FXQ92522 213 aaKnown RBP12.44□□□□□ -0.42
DDX49-201ENST00000247003 P2RX4Q99571 388 aa12.44□□□□□ -0.42
DDX49-201ENST00000247003 GGACTQ9BVM4 153 aa12.44□□□□□ -0.42
DDX49-201ENST00000247003 ACTR3CQ9C0K3 210 aaPredicted RBP12.44□□□□□ -0.42
DDX49-201ENST00000247003 DIDO1Q9BTC0 2240 aaKnown RBP12.44□□□□□ -0.42
DDX49-201ENST00000247003 SMCO3A2RU48 225 aa12.44□□□□□ -0.42
DDX49-201ENST00000247003 H3BQ15 152 aa12.44□□□□□ -0.42
DDX49-201ENST00000247003 ATXN7O15265 892 aaPredicted RBP12.44□□□□□ -0.42
DDX49-201ENST00000247003 MPDU1O75352 247 aa12.44□□□□□ -0.42
DDX49-201ENST00000247003 APOBEC3AP31941 199 aaPredicted RBP12.44□□□□□ -0.42
DDX49-201ENST00000247003 OR4A47Q6IF82 309 aa12.44□□□□□ -0.42
DDX49-201ENST00000247003 ACSM6Q6P461 480 aa12.44□□□□□ -0.42
DDX49-201ENST00000247003 ZNF383Q8NA42 475 aa12.44□□□□□ -0.42
DDX49-201ENST00000247003 TVP23CQ96ET8 276 aa12.44□□□□□ -0.42
DDX49-201ENST00000247003 SLC35D1Q9NTN3 355 aa12.44□□□□□ -0.42
DDX49-201ENST00000247003 VAX2Q9UIW0 290 aa12.44□□□□□ -0.42
DDX49-201ENST00000247003 TCF19Q9Y242 345 aa12.44□□□□□ -0.42
DDX49-201ENST00000247003 FOXA2Q9Y261 457 aaPredicted RBP12.44□□□□□ -0.42
DDX49-201ENST00000247003 RAXQ9Y2V3 346 aa12.44□□□□□ -0.42
DDX49-201ENST00000247003 COLCA2A8K830 154 aa12.43□□□□□ -0.42
DDX49-201ENST00000247003 B9A039 149 aa12.43□□□□□ -0.42
DDX49-201ENST00000247003 E7EQL1 145 aa12.43□□□□□ -0.42
DDX49-201ENST00000247003 CYB5BO43169 146 aa12.43□□□□□ -0.42
DDX49-201ENST00000247003 MT-ND4LP03901 98 aa12.43□□□□□ -0.42
DDX49-201ENST00000247003 TAGLN2P37802 199 aaKnown RBP12.43□□□□□ -0.42
DDX49-201ENST00000247003 CA7P43166 264 aa12.43□□□□□ -0.42
DDX49-201ENST00000247003 KLRB1Q12918 225 aa12.43□□□□□ -0.42
DDX49-201ENST00000247003 ACOT6Q3I5F7 207 aaPredicted RBP12.43□□□□□ -0.42
DDX49-201ENST00000247003 SSX7Q7RTT5 188 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms