RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 NUBP1P53384 320 aa16.93■□□□□ 0.3
SOX4-201ENST00000244745 IGKV3D-11A0A0A0MRZ8 115 aa16.92■□□□□ 0.3
SOX4-201ENST00000244745 CLDND2Q8NHS1 167 aa16.92■□□□□ 0.3
SOX4-201ENST00000244745 ODAMA1E959 279 aa16.92■□□□□ 0.3
SOX4-201ENST00000244745 F2RL2O00254 374 aa16.92■□□□□ 0.3
SOX4-201ENST00000244745 CRYBB3P26998 211 aa16.92■□□□□ 0.3
SOX4-201ENST00000244745 WDYHV1Q96HA8 205 aa16.92■□□□□ 0.3
SOX4-201ENST00000244745 FAM117AQ9C073 453 aa16.92■□□□□ 0.3
SOX4-201ENST00000244745 WNT10AQ9GZT5 417 aa16.92■□□□□ 0.3
SOX4-201ENST00000244745 CHCHD2Q9Y6H1 151 aaPredicted RBP16.92■□□□□ 0.3
SOX4-201ENST00000244745 SNCGO76070 127 aa16.92■□□□□ 0.3
SOX4-201ENST00000244745 KRTCAP3Q53RY4 240 aa16.92■□□□□ 0.3
SOX4-201ENST00000244745 WDR31Q8NA23 367 aa16.92■□□□□ 0.3
SOX4-201ENST00000244745 REG4Q9BYZ8 158 aa16.92■□□□□ 0.3
SOX4-201ENST00000244745 IDI2-AS1Q9NZ38 188 aa16.92■□□□□ 0.3
SOX4-201ENST00000244745 OR5R1Q8NH85 324 aa16.92■□□□□ 0.3
SOX4-201ENST00000244745 PSMG3Q9BT73 122 aaPredicted RBP16.92■□□□□ 0.3
SOX4-201ENST00000244745 IGKV3-7A0A075B6H7 116 aa16.91■□□□□ 0.3
SOX4-201ENST00000244745 COX5BP10606 129 aa16.91■□□□□ 0.3
SOX4-201ENST00000244745 ECSCRQ19T08 205 aa16.91■□□□□ 0.3
SOX4-201ENST00000244745 RCC1LQ96I51 464 aaKnown RBP16.91■□□□□ 0.3
SOX4-201ENST00000244745 DNAJC4Q9NNZ3 241 aa16.91■□□□□ 0.3
SOX4-201ENST00000244745 SSTR5P35346 364 aa16.91■□□□□ 0.3
SOX4-201ENST00000244745 RPRMQ9NS64 109 aa16.91■□□□□ 0.3
SOX4-201ENST00000244745 PGPA6NDG6 321 aa16.91■□□□□ 0.3
SOX4-201ENST00000244745 DPRXA6NFQ7 191 aa16.91■□□□□ 0.3
SOX4-201ENST00000244745 GCSHP23434 173 aa16.91■□□□□ 0.3
SOX4-201ENST00000244745 RPL8P62917 257 aaKnown RBP16.91■□□□□ 0.3
SOX4-201ENST00000244745 C1orf174Q8IYL3 243 aa16.91■□□□□ 0.3
SOX4-201ENST00000244745 PILRBQ9UKJ0 227 aa16.91■□□□□ 0.3
SOX4-201ENST00000244745 hCG_38984A0A1B0GV85 526 aa16.9■□□□□ 0.3
SOX4-201ENST00000244745 KLF7O75840 302 aaPredicted RBP16.9■□□□□ 0.3
SOX4-201ENST00000244745 RPL27AP46776 148 aaKnown RBP16.9■□□□□ 0.3
SOX4-201ENST00000244745 SPSB4Q96A44 273 aa16.9■□□□□ 0.3
SOX4-201ENST00000244745 MS4A5Q9H3V2 200 aa16.9■□□□□ 0.3
SOX4-201ENST00000244745 F8VVB4 439 aa16.9■□□□□ 0.3
SOX4-201ENST00000244745 F8VWA3 439 aa16.9■□□□□ 0.3
SOX4-201ENST00000244745 FGF16O43320 207 aa16.9■□□□□ 0.3
SOX4-201ENST00000244745 RFPL3SP0C7P2 107 aa16.9■□□□□ 0.3
SOX4-201ENST00000244745 IMMP2LQ96T52 175 aa16.9■□□□□ 0.3
SOX4-201ENST00000244745 TMEM189A5PLL7 270 aa16.9■□□□□ 0.3
SOX4-201ENST00000244745 MAS1LP35410 378 aa16.9■□□□□ 0.3
SOX4-201ENST00000244745 HOXA4Q00056 320 aaPredicted RBP16.9■□□□□ 0.3
SOX4-201ENST00000244745 F11RQ9Y624 299 aaKnown RBP16.9■□□□□ 0.3
SOX4-201ENST00000244745 VENTXO95231 258 aa16.9■□□□□ 0.3
SOX4-201ENST00000244745 UBTD1Q9HAC8 227 aa16.9■□□□□ 0.3
SOX4-201ENST00000244745 NPIPB7O75200 414 aa16.9■□□□□ 0.3
SOX4-201ENST00000244745 NDUFAF3Q9BU61 184 aa16.89■□□□□ 0.29
SOX4-201ENST00000244745 ZNF430Q9H8G1 570 aaPredicted RBP16.89■□□□□ 0.29
SOX4-201ENST00000244745 ZNF124Q15973 351 aa16.89■□□□□ 0.29
SOX4-201ENST00000244745 HSPE1P61604 102 aaKnown RBP16.89■□□□□ 0.29
SOX4-201ENST00000244745 C14orf144Q96I85 54 aa16.89■□□□□ 0.29
SOX4-201ENST00000244745 HLA-DRB1P01911 266 aa16.89■□□□□ 0.29
SOX4-201ENST00000244745 EAF1Q96JC9 268 aaPredicted RBP16.89■□□□□ 0.29
SOX4-201ENST00000244745 SDF2L1Q9HCN8 221 aa16.89■□□□□ 0.29
SOX4-201ENST00000244745 TMEM250H0YL14 139 aa16.88■□□□□ 0.29
SOX4-201ENST00000244745 TFF3Q07654 80 aa16.88■□□□□ 0.29
SOX4-201ENST00000244745 TBL2Q9Y4P3 447 aaKnown RBP16.88■□□□□ 0.29
SOX4-201ENST00000244745 REG1AP05451 166 aa16.88■□□□□ 0.29
SOX4-201ENST00000244745 ZNF735P0CB33 412 aa16.88■□□□□ 0.29
SOX4-201ENST00000244745 FLVCR1-AS1Q8TAF5 88 aa16.88■□□□□ 0.29
SOX4-201ENST00000244745 SLC25A33Q9BSK2 321 aa16.88■□□□□ 0.29
SOX4-201ENST00000244745 JPT1Q9UK76 154 aa16.88■□□□□ 0.29
SOX4-201ENST00000244745 PRR33A8MZF0 331 aa16.88■□□□□ 0.29
SOX4-201ENST00000244745 WNT9BO14905 357 aa16.88■□□□□ 0.29
SOX4-201ENST00000244745 STPG3Q8N7X2 389 aa16.88■□□□□ 0.29
SOX4-201ENST00000244745 NKX2-8O15522 239 aa16.88■□□□□ 0.29
SOX4-201ENST00000244745 KIR2DL2P43627 348 aaPredicted RBP16.88■□□□□ 0.29
SOX4-201ENST00000244745 RND2P52198 227 aa16.88■□□□□ 0.29
SOX4-201ENST00000244745 CALHM1Q8IU99 346 aa16.88■□□□□ 0.29
SOX4-201ENST00000244745 GUCD1Q96NT3 240 aa16.88■□□□□ 0.29
SOX4-201ENST00000244745 TCF19Q9Y242 345 aa16.88■□□□□ 0.29
SOX4-201ENST00000244745 HILPDAQ9Y5L2 63 aa16.88■□□□□ 0.29
SOX4-201ENST00000244745 PROB1E7EW31 1015 aa16.88■□□□□ 0.29
SOX4-201ENST00000244745 DNASE2BQ8WZ79 361 aa16.88■□□□□ 0.29
SOX4-201ENST00000244745 NPCDR1Q9BY65 106 aa16.88■□□□□ 0.29
SOX4-201ENST00000244745 SH2D7A6NKC9 451 aaPredicted RBP16.87■□□□□ 0.29
SOX4-201ENST00000244745 ICAM4Q14773 271 aa16.87■□□□□ 0.29
SOX4-201ENST00000244745 ATP1A1-AS1Q5TC04 95 aa16.87■□□□□ 0.29
SOX4-201ENST00000244745 AKIRIN1Q9H9L7 192 aaPredicted RBP16.87■□□□□ 0.29
SOX4-201ENST00000244745 ARF6P62330 175 aa16.87■□□□□ 0.29
SOX4-201ENST00000244745 TMEM136Q6ZRR5 245 aa16.87■□□□□ 0.29
SOX4-201ENST00000244745 SGK494Q96LW2 274 aa16.87■□□□□ 0.29
SOX4-201ENST00000244745 C1RLQ9NZP8 487 aa16.87■□□□□ 0.29
SOX4-201ENST00000244745 GCHFRP30047 84 aa16.87■□□□□ 0.29
SOX4-201ENST00000244745 LCN2P80188 198 aa16.87■□□□□ 0.29
SOX4-201ENST00000244745 VWCEQ96DN2 955 aa16.87■□□□□ 0.29
SOX4-201ENST00000244745 C18orf12Q96KH6 178 aa16.87■□□□□ 0.29
SOX4-201ENST00000244745 MIEN1Q9BRT3 115 aa16.87■□□□□ 0.29
SOX4-201ENST00000244745 STARD6P59095 220 aa16.87■□□□□ 0.29
SOX4-201ENST00000244745 ZNF837Q96EG3 531 aaPredicted RBP16.87■□□□□ 0.29
SOX4-201ENST00000244745 DOCK4Q8N1I0 1966 aa16.87■□□□□ 0.29
SOX4-201ENST00000244745 WDR90Q96KV7 1748 aa16.87■□□□□ 0.29
SOX4-201ENST00000244745 TMEM177Q53S58 311 aa16.86■□□□□ 0.29
SOX4-201ENST00000244745 C8orf88P0DMB2 117 aa16.86■□□□□ 0.29
SOX4-201ENST00000244745 LRRC75BQ2VPJ9 315 aa16.86■□□□□ 0.29
SOX4-201ENST00000244745 CENPWQ5EE01 88 aa16.86■□□□□ 0.29
SOX4-201ENST00000244745 ST6GALNAC3Q8NDV1 305 aa16.86■□□□□ 0.29
SOX4-201ENST00000244745 AUP1Q9Y679 476 aa16.86■□□□□ 0.29
SOX4-201ENST00000244745 DLX1P56177 255 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms