RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 TMEM250H0YL14 139 aa11.95□□□□□ -0.5
HIF3A-202ENST00000244303 PHOX2AO14813 284 aa11.95□□□□□ -0.5
HIF3A-202ENST00000244303 FCGR3BO75015 233 aa11.95□□□□□ -0.5
HIF3A-202ENST00000244303 TNFSF13O75888 250 aa11.95□□□□□ -0.5
HIF3A-202ENST00000244303 IFNA10P01566 189 aa11.95□□□□□ -0.5
HIF3A-202ENST00000244303 FOSL1P15407 271 aa11.95□□□□□ -0.5
HIF3A-202ENST00000244303 RPL23P62829 140 aaKnown RBP11.95□□□□□ -0.5
HIF3A-202ENST00000244303 BSXQ3C1V8 233 aa11.95□□□□□ -0.5
HIF3A-202ENST00000244303 DNLZQ5SXM8 178 aa11.95□□□□□ -0.5
HIF3A-202ENST00000244303 TRAT1Q6PIZ9 186 aa11.95□□□□□ -0.5
HIF3A-202ENST00000244303 ZNF71Q9NQZ8 489 aaPredicted RBP11.95□□□□□ -0.5
HIF3A-202ENST00000244303 DKK4Q9UBT3 224 aa11.95□□□□□ -0.5
HIF3A-202ENST00000244303 PAX5Q02548 391 aa11.94□□□□□ -0.5
HIF3A-202ENST00000244303 UNQ6494/PRO21346Q6UXR6 183 aa11.94□□□□□ -0.5
HIF3A-202ENST00000244303 NECAP1Q8NC96 275 aa11.94□□□□□ -0.5
HIF3A-202ENST00000244303 FAM234AQ9H0X4 552 aa11.94□□□□□ -0.5
HIF3A-202ENST00000244303 OR6C3Q9NZP0 311 aa11.94□□□□□ -0.5
HIF3A-202ENST00000244303 GNG12Q9UBI6 72 aa11.94□□□□□ -0.5
HIF3A-202ENST00000244303 PROCRQ9UNN8 238 aa11.94□□□□□ -0.5
HIF3A-202ENST00000244303 A0A1B0GWJ7 208 aa11.94□□□□□ -0.5
HIF3A-202ENST00000244303 SRRM5B3KS81 715 aa11.94□□□□□ -0.5
HIF3A-202ENST00000244303 C17orf112F2Z3M2 114 aa11.94□□□□□ -0.5
HIF3A-202ENST00000244303 PAGE4O60829 102 aa11.94□□□□□ -0.5
HIF3A-202ENST00000244303 MSMPQ1L6U9 139 aa11.94□□□□□ -0.5
HIF3A-202ENST00000244303 MORN2Q502X0 79 aa11.94□□□□□ -0.5
HIF3A-202ENST00000244303 BHLHA15Q7RTS1 189 aaPredicted RBP11.94□□□□□ -0.5
HIF3A-202ENST00000244303 LRP11Q86VZ4 500 aa11.94□□□□□ -0.5
HIF3A-202ENST00000244303 Q8N7P7 452 aa11.94□□□□□ -0.5
HIF3A-202ENST00000244303 OR10A7Q8NGE5 316 aa11.94□□□□□ -0.5
HIF3A-202ENST00000244303 STARD4Q96DR4 205 aa11.94□□□□□ -0.5
HIF3A-202ENST00000244303 DUSP13Q9UII6 198 aa11.94□□□□□ -0.5
HIF3A-202ENST00000244303 BOD1L1Q8NFC6 3051 aa11.93□□□□□ -0.5
HIF3A-202ENST00000244303 IGHV3OR15-7A0A075B7D8 119 aa11.93□□□□□ -0.5
HIF3A-202ENST00000244303 IGHV3-13P01766 116 aa11.93□□□□□ -0.5
HIF3A-202ENST00000244303 IGHV3-7P01780 117 aa11.93□□□□□ -0.5
HIF3A-202ENST00000244303 RTP5Q14D33 572 aa11.93□□□□□ -0.5
HIF3A-202ENST00000244303 ALKBH2Q6NS38 261 aa11.93□□□□□ -0.5
HIF3A-202ENST00000244303 Q8TCH9 128 aa11.93□□□□□ -0.5
HIF3A-202ENST00000244303 GAB2Q9UQC2 676 aa11.93□□□□□ -0.5
HIF3A-202ENST00000244303 SLC31A2O15432 143 aa11.93□□□□□ -0.5
HIF3A-202ENST00000244303 HPRT1P00492 218 aa11.93□□□□□ -0.5
HIF3A-202ENST00000244303 CGAP01215 116 aa11.93□□□□□ -0.5
HIF3A-202ENST00000244303 PFN1P07737 140 aaKnown RBP11.93□□□□□ -0.5
HIF3A-202ENST00000244303 CDC34P49427 236 aaPredicted RBP11.93□□□□□ -0.5
HIF3A-202ENST00000244303 SPRNQ5BIV9 151 aa11.93□□□□□ -0.5
HIF3A-202ENST00000244303 PRAMEF5Q5TYX0 476 aa11.93□□□□□ -0.5
HIF3A-202ENST00000244303 OR5R1Q8NH85 324 aa11.93□□□□□ -0.5
HIF3A-202ENST00000244303 JPT1Q9UK76 154 aa11.93□□□□□ -0.5
HIF3A-202ENST00000244303 DSCAML1Q8TD84 2053 aa11.92□□□□□ -0.5
HIF3A-202ENST00000244303 M0R1X1 148 aa11.92□□□□□ -0.5
HIF3A-202ENST00000244303 TM4SF5O14894 197 aa11.92□□□□□ -0.5
HIF3A-202ENST00000244303 GZMHP20718 246 aa11.92□□□□□ -0.5
HIF3A-202ENST00000244303 CD1BP29016 333 aa11.92□□□□□ -0.5
HIF3A-202ENST00000244303 MZT1Q08AG7 82 aa11.92□□□□□ -0.5
HIF3A-202ENST00000244303 ACOT6Q3I5F7 207 aaPredicted RBP11.92□□□□□ -0.5
HIF3A-202ENST00000244303 RPL39P5Q59GN2 51 aa11.92□□□□□ -0.5
HIF3A-202ENST00000244303 GCSAMLQ5JQS6 135 aa11.92□□□□□ -0.5
HIF3A-202ENST00000244303 SEM1Q6ZVN7 128 aa11.92□□□□□ -0.5
HIF3A-202ENST00000244303 TMEM183AQ8IXX5 376 aa11.92□□□□□ -0.5
HIF3A-202ENST00000244303 VKORC1L1Q8N0U8 176 aa11.92□□□□□ -0.5
HIF3A-202ENST00000244303 GCSAMQ8N6F7 178 aa11.92□□□□□ -0.5
HIF3A-202ENST00000244303 OR4X1Q8NH49 305 aa11.92□□□□□ -0.5
HIF3A-202ENST00000244303 WDR83OSQ9Y284 106 aa11.92□□□□□ -0.5
HIF3A-202ENST00000244303 SLC25A15Q9Y619 301 aa11.92□□□□□ -0.5
HIF3A-202ENST00000244303 DSCAMO60469 2012 aa11.92□□□□□ -0.5
HIF3A-202ENST00000244303 ZNF134P52741 427 aa11.91□□□□□ -0.5
HIF3A-202ENST00000244303 USF2Q15853 346 aaPredicted RBP11.91□□□□□ -0.5
HIF3A-202ENST00000244303 IGFL3Q6UXB1 125 aa11.91□□□□□ -0.5
HIF3A-202ENST00000244303 FAM90A1Q86YD7 464 aa11.91□□□□□ -0.5
HIF3A-202ENST00000244303 ZNRF1Q8ND25 227 aa11.91□□□□□ -0.5
HIF3A-202ENST00000244303 CADP27708 2225 aa11.91□□□□□ -0.5
HIF3A-202ENST00000244303 TANC2Q9HCD6 1990 aa11.91□□□□□ -0.5
HIF3A-202ENST00000244303 TRAV38-1A0A0B4J264 116 aa11.91□□□□□ -0.5
HIF3A-202ENST00000244303 H7BYZ3 331 aa11.91□□□□□ -0.5
HIF3A-202ENST00000244303 MGST3O14880 152 aa11.91□□□□□ -0.5
HIF3A-202ENST00000244303 YPEL1O60688 119 aa11.91□□□□□ -0.5
HIF3A-202ENST00000244303 NDUFB7P17568 137 aa11.91□□□□□ -0.5
HIF3A-202ENST00000244303 GALR1P47211 349 aa11.91□□□□□ -0.5
HIF3A-202ENST00000244303 TAS2R60P59551 318 aa11.91□□□□□ -0.5
HIF3A-202ENST00000244303 P2RY6Q15077 328 aa11.91□□□□□ -0.5
HIF3A-202ENST00000244303 SSX2Q16385 188 aa11.91□□□□□ -0.5
HIF3A-202ENST00000244303 AARDQ4LEZ3 155 aa11.91□□□□□ -0.5
HIF3A-202ENST00000244303 OR51G1Q8NGK1 321 aa11.91□□□□□ -0.5
HIF3A-202ENST00000244303 OR4A16Q8NH70 328 aa11.91□□□□□ -0.5
HIF3A-202ENST00000244303 NEIL1Q96FI4 390 aaPredicted RBP11.91□□□□□ -0.5
HIF3A-202ENST00000244303 YPEL2Q96QA6 119 aa11.91□□□□□ -0.5
HIF3A-202ENST00000244303 DIRC2Q96SL1 478 aa11.91□□□□□ -0.5
HIF3A-202ENST00000244303 PYGO2Q9BRQ0 406 aa11.91□□□□□ -0.5
HIF3A-202ENST00000244303 ELOVL1Q9BW60 279 aa11.91□□□□□ -0.5
HIF3A-202ENST00000244303 SRD5A3Q9H8P0 318 aa11.91□□□□□ -0.5
HIF3A-202ENST00000244303 ZNF705GA8MUZ8 300 aaPredicted RBP11.9□□□□□ -0.5
HIF3A-202ENST00000244303 C11orf94C9JXX5 98 aa11.9□□□□□ -0.5
HIF3A-202ENST00000244303 GYPAP02724 150 aa11.9□□□□□ -0.5
HIF3A-202ENST00000244303 ZNF83P51522 516 aa11.9□□□□□ -0.5
HIF3A-202ENST00000244303 EDDM3BP56851 147 aa11.9□□□□□ -0.5
HIF3A-202ENST00000244303 LOXL3P58215 753 aa11.9□□□□□ -0.5
HIF3A-202ENST00000244303 C1orf174Q8IYL3 243 aa11.9□□□□□ -0.5
HIF3A-202ENST00000244303 OR2V2Q96R30 315 aa11.9□□□□□ -0.5
HIF3A-202ENST00000244303 TRAV3A0A0B4J244 114 aa11.9□□□□□ -0.5
HIF3A-202ENST00000244303 MBD3L4A6NDZ8 208 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms