RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 TBR1Q16650 682 aa10.99□□□□□ -0.65
VAMP4-201ENST00000236192 DUX1O43812 170 aa10.99□□□□□ -0.65
VAMP4-201ENST00000236192 LINC00596Q86U02 117 aa10.99□□□□□ -0.65
VAMP4-201ENST00000236192 STRADBQ9C0K7 418 aa10.99□□□□□ -0.65
VAMP4-201ENST00000236192 MS4A5Q9H3V2 200 aa10.99□□□□□ -0.65
VAMP4-201ENST00000236192 FGF22Q9HCT0 170 aa10.99□□□□□ -0.65
VAMP4-201ENST00000236192 ATP23Q9Y6H3 246 aa10.99□□□□□ -0.65
VAMP4-201ENST00000236192 MT-CO3P00414 261 aa10.98□□□□□ -0.65
VAMP4-201ENST00000236192 TFF3Q07654 80 aa10.98□□□□□ -0.65
VAMP4-201ENST00000236192 TDRG1Q3Y452 100 aa10.98□□□□□ -0.65
VAMP4-201ENST00000236192 FHL5Q5TD97 284 aa10.98□□□□□ -0.65
VAMP4-201ENST00000236192 PLXDC1Q8IUK5 500 aa10.98□□□□□ -0.65
VAMP4-201ENST00000236192 Q8IYB0 196 aa10.98□□□□□ -0.65
VAMP4-201ENST00000236192 C10orf126Q8N4M7 172 aa10.98□□□□□ -0.65
VAMP4-201ENST00000236192 GREB1LQ9C091 1923 aaPredicted RBP10.98□□□□□ -0.65
VAMP4-201ENST00000236192 FAM90A10PA6NDY2 464 aa10.98□□□□□ -0.65
VAMP4-201ENST00000236192 FAM90A18PA6NE21 464 aa10.98□□□□□ -0.65
VAMP4-201ENST00000236192 FAM90A16PA6NEW6 464 aa10.98□□□□□ -0.65
VAMP4-201ENST00000236192 FAM90A20PA6NIJ5 464 aa10.98□□□□□ -0.65
VAMP4-201ENST00000236192 FAM90A8PA6NJQ4 464 aa10.98□□□□□ -0.65
VAMP4-201ENST00000236192 FAM90A7PA6NKC0 464 aa10.98□□□□□ -0.65
VAMP4-201ENST00000236192 FAM90A22PA8MWA6 464 aa10.98□□□□□ -0.65
VAMP4-201ENST00000236192 FAM90A12PA8MX19 464 aa10.98□□□□□ -0.65
VAMP4-201ENST00000236192 FAM90A5PA8MXJ8 464 aa10.98□□□□□ -0.65
VAMP4-201ENST00000236192 FAM90A23PA8MXZ1 464 aa10.98□□□□□ -0.65
VAMP4-201ENST00000236192 SYS1-DBNDD2H3BUS1 97 aa10.98□□□□□ -0.65
VAMP4-201ENST00000236192 FAM90A15PP0C7V4 464 aa10.98□□□□□ -0.65
VAMP4-201ENST00000236192 FAM90A13PP0C7W8 464 aa10.98□□□□□ -0.65
VAMP4-201ENST00000236192 FAM90A14PP0C7W9 464 aa10.98□□□□□ -0.65
VAMP4-201ENST00000236192 FAM90A24PP0C7X0 464 aa10.98□□□□□ -0.65
VAMP4-201ENST00000236192 IGLL1P15814 213 aa10.98□□□□□ -0.65
VAMP4-201ENST00000236192 IZUMO4Q1ZYL8 232 aa10.98□□□□□ -0.65
VAMP4-201ENST00000236192 RASL11AQ6T310 242 aa10.98□□□□□ -0.65
VAMP4-201ENST00000236192 Q6ZSR6 202 aa10.98□□□□□ -0.65
VAMP4-201ENST00000236192 TWIST1Q15672 202 aa10.98□□□□□ -0.65
VAMP4-201ENST00000236192 SAXO1Q8IYX7 474 aa10.98□□□□□ -0.65
VAMP4-201ENST00000236192 NGFP01138 241 aa10.98□□□□□ -0.65
VAMP4-201ENST00000236192 LGALS4P56470 323 aa10.98□□□□□ -0.65
VAMP4-201ENST00000236192 KRTCAP3Q53RY4 240 aa10.98□□□□□ -0.65
VAMP4-201ENST00000236192 IGHMP01871 453 aa10.97□□□□□ -0.65
VAMP4-201ENST00000236192 CEACAM5P06731 702 aa10.97□□□□□ -0.65
VAMP4-201ENST00000236192 HERVK_113P61574 105 aa10.97□□□□□ -0.65
VAMP4-201ENST00000236192 FAM131CQ96AQ9 280 aa10.97□□□□□ -0.65
VAMP4-201ENST00000236192 F8W1H4 67 aa10.97□□□□□ -0.65
VAMP4-201ENST00000236192 RPL8P62917 257 aaKnown RBP10.97□□□□□ -0.65
VAMP4-201ENST00000236192 EDDM3AQ14507 147 aa10.97□□□□□ -0.65
VAMP4-201ENST00000236192 WDR82Q6UXN9 313 aa10.97□□□□□ -0.65
VAMP4-201ENST00000236192 COX14Q96I36 57 aa10.97□□□□□ -0.65
VAMP4-201ENST00000236192 CLUHP3Q96NS8 147 aa10.97□□□□□ -0.65
VAMP4-201ENST00000236192 LRRC30A6NM36 301 aa10.97□□□□□ -0.65
VAMP4-201ENST00000236192 KCNK17Q96T54 332 aa10.97□□□□□ -0.65
VAMP4-201ENST00000236192 RNASE7Q9H1E1 156 aaKnown RBP10.97□□□□□ -0.65
VAMP4-201ENST00000236192 TRAV5A0A0B4J249 113 aa10.97□□□□□ -0.65
VAMP4-201ENST00000236192 IGKV1-8A0A0C4DH67 115 aa10.97□□□□□ -0.65
VAMP4-201ENST00000236192 AHRRA9YTQ3 701 aa10.97□□□□□ -0.65
VAMP4-201ENST00000236192 ZG16O60844 167 aa10.97□□□□□ -0.65
VAMP4-201ENST00000236192 APOHP02749 345 aaPredicted RBP10.97□□□□□ -0.65
VAMP4-201ENST00000236192 GRPP07492 148 aa10.97□□□□□ -0.65
VAMP4-201ENST00000236192 RPL7P18124 248 aaKnown RBP10.97□□□□□ -0.65
VAMP4-201ENST00000236192 SLC25A33Q9BSK2 321 aa10.97□□□□□ -0.65
VAMP4-201ENST00000236192 ZNF355PQ9NSJ1 428 aa10.97□□□□□ -0.65
VAMP4-201ENST00000236192 OR9G9P0C7N8 305 aa10.96□□□□□ -0.65
VAMP4-201ENST00000236192 B4GALT1P15291 398 aa10.96□□□□□ -0.65
VAMP4-201ENST00000236192 RPL15P61313 204 aaKnown RBP10.96□□□□□ -0.65
VAMP4-201ENST00000236192 C1QL2Q7Z5L3 287 aa10.96□□□□□ -0.65
VAMP4-201ENST00000236192 BOD1L2Q8IYS8 172 aa10.96□□□□□ -0.65
VAMP4-201ENST00000236192 ZADH2Q8N4Q0 377 aa10.96□□□□□ -0.65
VAMP4-201ENST00000236192 B4GALT7Q9UBV7 327 aa10.96□□□□□ -0.65
VAMP4-201ENST00000236192 TRAV8-2A0A0B4J237 113 aa10.96□□□□□ -0.65
VAMP4-201ENST00000236192 GNG3P63215 75 aa10.96□□□□□ -0.65
VAMP4-201ENST00000236192 SRYQ05066 204 aa10.96□□□□□ -0.65
VAMP4-201ENST00000236192 OR2M3Q8NG83 312 aa10.96□□□□□ -0.65
VAMP4-201ENST00000236192 NDFIP1Q9BT67 221 aa10.96□□□□□ -0.65
VAMP4-201ENST00000236192 A0A1W2PRE2 83 aa10.96□□□□□ -0.66
VAMP4-201ENST00000236192 LIPT2A6NK58 231 aa10.96□□□□□ -0.66
VAMP4-201ENST00000236192 C4orf51C9J302 202 aa10.96□□□□□ -0.66
VAMP4-201ENST00000236192 CD38P28907 300 aa10.96□□□□□ -0.66
VAMP4-201ENST00000236192 SPEM2Q0P670 501 aa10.96□□□□□ -0.66
VAMP4-201ENST00000236192 TRGV10A0A0A0MS01 117 aa10.96□□□□□ -0.66
VAMP4-201ENST00000236192 TMPRSS2O15393 492 aa10.96□□□□□ -0.66
VAMP4-201ENST00000236192 SRFP11831 508 aa10.96□□□□□ -0.66
VAMP4-201ENST00000236192 OPRK1P41145 380 aa10.96□□□□□ -0.66
VAMP4-201ENST00000236192 ERVK11-1P61568 191 aa10.96□□□□□ -0.66
VAMP4-201ENST00000236192 IL15RAQ13261 267 aa10.96□□□□□ -0.66
VAMP4-201ENST00000236192 PAXXQ9BUH6 204 aa10.96□□□□□ -0.66
VAMP4-201ENST00000236192 LINC00470Q9BZP3 86 aa10.96□□□□□ -0.66
VAMP4-201ENST00000236192 LY96Q9Y6Y9 160 aa10.96□□□□□ -0.66
VAMP4-201ENST00000236192 NBEAP1P0C6P0 100 aa10.95□□□□□ -0.66
VAMP4-201ENST00000236192 CX3CL1P78423 397 aa10.95□□□□□ -0.66
VAMP4-201ENST00000236192 FNDC7Q5VTL7 733 aa10.95□□□□□ -0.66
VAMP4-201ENST00000236192 C10orf113Q5VZT2 155 aa10.95□□□□□ -0.66
VAMP4-201ENST00000236192 RPP25LQ8N5L8 163 aaKnown RBP10.95□□□□□ -0.66
VAMP4-201ENST00000236192 PSG11Q9UQ72 335 aa10.95□□□□□ -0.66
VAMP4-201ENST00000236192 TNFSF11O14788 317 aa10.95□□□□□ -0.66
VAMP4-201ENST00000236192 TSPAN13O95857 204 aa10.95□□□□□ -0.66
VAMP4-201ENST00000236192 OR13C6PQ8NH95 151 aa10.95□□□□□ -0.66
VAMP4-201ENST00000236192 PLA2G2EQ9NZK7 142 aa10.95□□□□□ -0.66
VAMP4-201ENST00000236192 C9JCJ5 164 aa10.95□□□□□ -0.66
VAMP4-201ENST00000236192 RUNX3Q13761 415 aa10.95□□□□□ -0.66
VAMP4-201ENST00000236192 GUSBP1Q15486 140 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms