RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 CX3CL1P78423 397 aa11.41□□□□□ -0.58
NEK4-201ENST00000233027 CENPWQ5EE01 88 aa11.41□□□□□ -0.58
NEK4-201ENST00000233027 BIVMQ86UB2 503 aa11.41□□□□□ -0.58
NEK4-201ENST00000233027 TXNDC17Q9BRA2 123 aa11.41□□□□□ -0.58
NEK4-201ENST00000233027 COL25A1Q9BXS0 654 aaPredicted RBP11.41□□□□□ -0.58
NEK4-201ENST00000233027 SCN2AQ99250 2005 aa11.41□□□□□ -0.58
NEK4-201ENST00000233027 IGKV3D-11A0A0A0MRZ8 115 aa11.4□□□□□ -0.58
NEK4-201ENST00000233027 IGKV3-11P04433 115 aa11.4□□□□□ -0.58
NEK4-201ENST00000233027 PF4V1P10720 104 aa11.4□□□□□ -0.58
NEK4-201ENST00000233027 TFF3Q07654 80 aa11.4□□□□□ -0.58
NEK4-201ENST00000233027 FAM53AQ6NSI3 398 aaPredicted RBP11.4□□□□□ -0.58
NEK4-201ENST00000233027 DIRC2Q96SL1 478 aa11.4□□□□□ -0.58
NEK4-201ENST00000233027 GCHFRP30047 84 aa11.4□□□□□ -0.58
NEK4-201ENST00000233027 SLC25A34Q6PIV7 304 aa11.4□□□□□ -0.58
NEK4-201ENST00000233027 OR5P3Q8WZ94 311 aa11.4□□□□□ -0.58
NEK4-201ENST00000233027 DICER1Q9UPY3 1922 aaKnown RBP11.4□□□□□ -0.58
NEK4-201ENST00000233027 FAM106CPP0CH98 169 aa11.4□□□□□ -0.58
NEK4-201ENST00000233027 P2RY6Q15077 328 aa11.4□□□□□ -0.58
NEK4-201ENST00000233027 ATRAIDQ6UW56 229 aa11.4□□□□□ -0.58
NEK4-201ENST00000233027 HERPUD1Q15011 391 aa11.4□□□□□ -0.59
NEK4-201ENST00000233027 C1orf174Q8IYL3 243 aa11.4□□□□□ -0.59
NEK4-201ENST00000233027 RTBDNQ9BSG5 229 aaPredicted RBP11.4□□□□□ -0.59
NEK4-201ENST00000233027 JPT1Q9UK76 154 aa11.4□□□□□ -0.59
NEK4-201ENST00000233027 PROB1E7EW31 1015 aa11.39□□□□□ -0.59
NEK4-201ENST00000233027 UCP3P55916 312 aa11.39□□□□□ -0.59
NEK4-201ENST00000233027 EBLN2Q6P2I7 272 aa11.39□□□□□ -0.59
NEK4-201ENST00000233027 C12orf54Q6X4T0 127 aa11.39□□□□□ -0.59
NEK4-201ENST00000233027 ZDHHC8Q9ULC8 765 aa11.39□□□□□ -0.59
NEK4-201ENST00000233027 CCDC88CQ9P219 2028 aa11.39□□□□□ -0.59
NEK4-201ENST00000233027 A0A1W2PQM1 296 aa11.39□□□□□ -0.59
NEK4-201ENST00000233027 SS18L1O75177 396 aaPredicted RBP11.39□□□□□ -0.59
NEK4-201ENST00000233027 MBNL2Q5VZF2 373 aaKnown RBP11.39□□□□□ -0.59
NEK4-201ENST00000233027 GOLT1AQ6ZVE7 132 aa11.39□□□□□ -0.59
NEK4-201ENST00000233027 SAP25Q8TEE9 199 aa11.39□□□□□ -0.59
NEK4-201ENST00000233027 NPIPB3Q92617 1050 aa11.39□□□□□ -0.59
NEK4-201ENST00000233027 IMMP2LQ96T52 175 aa11.39□□□□□ -0.59
NEK4-201ENST00000233027 SLC17A3O00476 420 aa11.39□□□□□ -0.59
NEK4-201ENST00000233027 IGHV3-23P01764 117 aa11.39□□□□□ -0.59
NEK4-201ENST00000233027 IGLV3-21P80748 117 aaPredicted RBP11.39□□□□□ -0.59
NEK4-201ENST00000233027 ADIPOQQ15848 244 aa11.39□□□□□ -0.59
NEK4-201ENST00000233027 WNT10AQ9GZT5 417 aa11.39□□□□□ -0.59
NEK4-201ENST00000233027 TRAV14DV4A0A0A6YYC5 116 aa11.39□□□□□ -0.59
NEK4-201ENST00000233027 IGHV3-35A0A0C4DH35 117 aa11.39□□□□□ -0.59
NEK4-201ENST00000233027 LOC105371267A0A1B0GV96 52 aa11.39□□□□□ -0.59
NEK4-201ENST00000233027 ZNF506Q5JVG8 444 aa11.39□□□□□ -0.59
NEK4-201ENST00000233027 TMEM238LA0A1B0GVL6 79 aa11.39□□□□□ -0.59
NEK4-201ENST00000233027 A6NJY4 79 aa11.39□□□□□ -0.59
NEK4-201ENST00000233027 CTAG1AP78358 180 aa11.39□□□□□ -0.59
NEK4-201ENST00000233027 TMEM183AQ8IXX5 376 aa11.39□□□□□ -0.59
NEK4-201ENST00000233027 ZNRF1Q8ND25 227 aa11.39□□□□□ -0.59
NEK4-201ENST00000233027 RPRMQ9NS64 109 aa11.39□□□□□ -0.59
NEK4-201ENST00000233027 NPIPB9F8W1W9 429 aa11.38□□□□□ -0.59
NEK4-201ENST00000233027 IL6RP08887 468 aaPredicted RBP11.38□□□□□ -0.59
NEK4-201ENST00000233027 PRSS8Q16651 343 aa11.38□□□□□ -0.59
NEK4-201ENST00000233027 A0A087WV48 116 aa11.38□□□□□ -0.59
NEK4-201ENST00000233027 AHRRA9YTQ3 701 aa11.38□□□□□ -0.59
NEK4-201ENST00000233027 LDLRAD4O15165 306 aa11.38□□□□□ -0.59
NEK4-201ENST00000233027 LINC00305Q7Z4B0 112 aa11.38□□□□□ -0.59
NEK4-201ENST00000233027 OR51G1Q8NGK1 321 aa11.38□□□□□ -0.59
NEK4-201ENST00000233027 NPCDR1Q9BY65 106 aa11.38□□□□□ -0.59
NEK4-201ENST00000233027 PHLDA3Q9Y5J5 127 aa11.38□□□□□ -0.59
NEK4-201ENST00000233027 TMEM56-RWDD3S4R434 201 aa11.38□□□□□ -0.59
NEK4-201ENST00000233027 ZNF236Q9UL36 1845 aa11.38□□□□□ -0.59
NEK4-201ENST00000233027 hCG_38984A0A1B0GV85 526 aa11.38□□□□□ -0.59
NEK4-201ENST00000233027 TGFBR3LH3BV60 316 aa11.38□□□□□ -0.59
NEK4-201ENST00000233027 RFPL3SP0C7P2 107 aa11.38□□□□□ -0.59
NEK4-201ENST00000233027 MFAP4P55083 255 aa11.38□□□□□ -0.59
NEK4-201ENST00000233027 TMEM171Q8WVE6 324 aa11.38□□□□□ -0.59
NEK4-201ENST00000233027 RCC1LQ96I51 464 aaKnown RBP11.38□□□□□ -0.59
NEK4-201ENST00000233027 MIEN1Q9BRT3 115 aa11.38□□□□□ -0.59
NEK4-201ENST00000233027 ARID2Q68CP9 1835 aa11.38□□□□□ -0.59
NEK4-201ENST00000233027 UBE2L6O14933 153 aa11.38□□□□□ -0.59
NEK4-201ENST00000233027 GDF9O60383 454 aa11.38□□□□□ -0.59
NEK4-201ENST00000233027 DLX6P56179 175 aa11.38□□□□□ -0.59
NEK4-201ENST00000233027 ST6GALNAC3Q8NDV1 305 aa11.38□□□□□ -0.59
NEK4-201ENST00000233027 HLA-DRB1P01911 266 aa11.38□□□□□ -0.59
NEK4-201ENST00000233027 ARF6P62330 175 aa11.38□□□□□ -0.59
NEK4-201ENST00000233027 PSG9Q00887 426 aa11.38□□□□□ -0.59
NEK4-201ENST00000233027 SYT8Q8NBV8 401 aa11.38□□□□□ -0.59
NEK4-201ENST00000233027 S4R3C0 116 aa11.38□□□□□ -0.59
NEK4-201ENST00000233027 ANKRD36A6QL64 1941 aa11.37□□□□□ -0.59
NEK4-201ENST00000233027 PPIAL4CA0A0B4J2A2 164 aa11.37□□□□□ -0.59
NEK4-201ENST00000233027 C9orf172C9J069 976 aa11.37□□□□□ -0.59
NEK4-201ENST00000233027 IFI6P09912 130 aa11.37□□□□□ -0.59
NEK4-201ENST00000233027 FTH1P19P0C7X4 201 aa11.37□□□□□ -0.59
NEK4-201ENST00000233027 PPIAL4GP0DN37 164 aa11.37□□□□□ -0.59
NEK4-201ENST00000233027 RELQ04864 619 aaPredicted RBP11.37□□□□□ -0.59
NEK4-201ENST00000233027 ZNF146Q15072 292 aa11.37□□□□□ -0.59
NEK4-201ENST00000233027 AICDAQ9GZX7 198 aa11.37□□□□□ -0.59
NEK4-201ENST00000233027 ZNF256Q9Y2P7 627 aaPredicted RBP11.37□□□□□ -0.59
NEK4-201ENST00000233027 PARP14Q460N5 1801 aa11.37□□□□□ -0.59
NEK4-201ENST00000233027 SCO2A0A1W2PP80 73 aa11.37□□□□□ -0.59
NEK4-201ENST00000233027 SRSF3P84103 164 aaKnown RBP11.37□□□□□ -0.59
NEK4-201ENST00000233027 LY6EQ16553 131 aa11.37□□□□□ -0.59
NEK4-201ENST00000233027 C10orf128Q5T292 105 aa11.37□□□□□ -0.59
NEK4-201ENST00000233027 PCSK4Q6UW60 755 aa11.37□□□□□ -0.59
NEK4-201ENST00000233027 CGAP01215 116 aa11.37□□□□□ -0.59
NEK4-201ENST00000233027 RNASE1P07998 156 aaKnown RBP11.37□□□□□ -0.59
NEK4-201ENST00000233027 CELA3AP09093 270 aa11.37□□□□□ -0.59
NEK4-201ENST00000233027 FOXA3P55318 350 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms