RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 IGKV1-33P01594 117 aa20.7■□□□□ 0.9
RUNDC3A-201ENST00000225441 TGIF2LYQ8IUE0 185 aa20.7■□□□□ 0.9
RUNDC3A-201ENST00000225441 NCOR1P1Q9H4R4 102 aa20.7■□□□□ 0.9
RUNDC3A-201ENST00000225441 DMRT1Q9Y5R6 373 aa20.7■□□□□ 0.9
RUNDC3A-201ENST00000225441 NBEAQ8NFP9 2946 aa20.7■□□□□ 0.9
RUNDC3A-201ENST00000225441 RP1L1Q8IWN7 2480 aaPredicted RBP20.7■□□□□ 0.9
RUNDC3A-201ENST00000225441 OR5H1A6NKK0 313 aa20.69■□□□□ 0.9
RUNDC3A-201ENST00000225441 C15orf65H3BRN8 121 aa20.69■□□□□ 0.9
RUNDC3A-201ENST00000225441 MPDU1O75352 247 aa20.69■□□□□ 0.9
RUNDC3A-201ENST00000225441 YIF1AO95070 293 aa20.69■□□□□ 0.9
RUNDC3A-201ENST00000225441 PTBP3O95758 552 aaKnown RBP20.69■□□□□ 0.9
RUNDC3A-201ENST00000225441 TRGC2P03986 189 aa20.69■□□□□ 0.9
RUNDC3A-201ENST00000225441 CECR9P0C854 216 aa20.69■□□□□ 0.9
RUNDC3A-201ENST00000225441 ACOT6Q3I5F7 207 aaPredicted RBP20.69■□□□□ 0.9
RUNDC3A-201ENST00000225441 FFAR4Q5NUL3 377 aa20.69■□□□□ 0.9
RUNDC3A-201ENST00000225441 Q6ZR03 302 aa20.69■□□□□ 0.9
RUNDC3A-201ENST00000225441 OR52E5Q8NH55 327 aa20.69■□□□□ 0.9
RUNDC3A-201ENST00000225441 NPCDR1Q9BY65 106 aa20.69■□□□□ 0.9
RUNDC3A-201ENST00000225441 JPT1Q9UK76 154 aa20.69■□□□□ 0.9
RUNDC3A-201ENST00000225441 VENTXO95231 258 aa20.69■□□□□ 0.9
RUNDC3A-201ENST00000225441 IGHV2-70P01814 119 aa20.69■□□□□ 0.9
RUNDC3A-201ENST00000225441 PDLIM3Q53GG5 364 aaPredicted RBP20.69■□□□□ 0.9
RUNDC3A-201ENST00000225441 LINC00587B1AMM8 73 aa20.68■□□□□ 0.9
RUNDC3A-201ENST00000225441 ZG16O60844 167 aa20.68■□□□□ 0.9
RUNDC3A-201ENST00000225441 HPRT1P00492 218 aa20.68■□□□□ 0.9
RUNDC3A-201ENST00000225441 OR13A1Q8NGR1 328 aa20.68■□□□□ 0.9
RUNDC3A-201ENST00000225441 ANAPC16Q96DE5 110 aa20.68■□□□□ 0.9
RUNDC3A-201ENST00000225441 SRD5A3Q9H8P0 318 aa20.68■□□□□ 0.9
RUNDC3A-201ENST00000225441 RAB9BQ9NP90 201 aa20.68■□□□□ 0.9
RUNDC3A-201ENST00000225441 JKAMPQ9P055 326 aa20.68■□□□□ 0.9
RUNDC3A-201ENST00000225441 GAB2Q9UQC2 676 aa20.68■□□□□ 0.9
RUNDC3A-201ENST00000225441 ITGB1BP1O14713 200 aa20.67■□□□□ 0.9
RUNDC3A-201ENST00000225441 PRDX2P32119 198 aa20.67■□□□□ 0.9
RUNDC3A-201ENST00000225441 KIR2DS2P43631 304 aa20.67■□□□□ 0.9
RUNDC3A-201ENST00000225441 BSXQ3C1V8 233 aa20.67■□□□□ 0.9
RUNDC3A-201ENST00000225441 PRAMEF6Q5VXH4 476 aa20.67■□□□□ 0.9
RUNDC3A-201ENST00000225441 RAB1CQ92928 201 aa20.67■□□□□ 0.9
RUNDC3A-201ENST00000225441 IGHV2OR16-5A0A0B4J2B6 119 aa20.67■□□□□ 0.9
RUNDC3A-201ENST00000225441 IFITM10A6NMD0 228 aa20.67■□□□□ 0.9
RUNDC3A-201ENST00000225441 MARCH11A6NNE9 402 aa20.67■□□□□ 0.9
RUNDC3A-201ENST00000225441 YPEL1O60688 119 aa20.67■□□□□ 0.9
RUNDC3A-201ENST00000225441 AGFG2O95081 481 aa20.67■□□□□ 0.9
RUNDC3A-201ENST00000225441 OR10A7Q8NGE5 316 aa20.67■□□□□ 0.9
RUNDC3A-201ENST00000225441 YPEL2Q96QA6 119 aa20.67■□□□□ 0.9
RUNDC3A-201ENST00000225441 USP24Q9UPU5 2620 aa20.67■□□□□ 0.9
RUNDC3A-201ENST00000225441 CCL21O00585 134 aa20.66■□□□□ 0.9
RUNDC3A-201ENST00000225441 PHOX2AO14813 284 aa20.66■□□□□ 0.9
RUNDC3A-201ENST00000225441 PFN1P07737 140 aaKnown RBP20.66■□□□□ 0.9
RUNDC3A-201ENST00000225441 SPCS3P61009 180 aa20.66■□□□□ 0.9
RUNDC3A-201ENST00000225441 OR2B11Q5JQS5 317 aa20.66■□□□□ 0.9
RUNDC3A-201ENST00000225441 HIST3H2BBQ8N257 126 aa20.66■□□□□ 0.9
RUNDC3A-201ENST00000225441 S100PBPQ96BU1 408 aa20.66■□□□□ 0.9
RUNDC3A-201ENST00000225441 R3HDM4Q96D70 268 aa20.66■□□□□ 0.9
RUNDC3A-201ENST00000225441 SNX22Q96L94 193 aa20.66■□□□□ 0.9
RUNDC3A-201ENST00000225441 TXNDC17Q9BRA2 123 aa20.66■□□□□ 0.9
RUNDC3A-201ENST00000225441 ELOVL5Q9NYP7 299 aa20.66■□□□□ 0.9
RUNDC3A-201ENST00000225441 WDR83OSQ9Y284 106 aa20.66■□□□□ 0.9
RUNDC3A-201ENST00000225441 SLC25A15Q9Y619 301 aa20.66■□□□□ 0.9
RUNDC3A-201ENST00000225441 MGST3O14880 152 aa20.65■□□□□ 0.9
RUNDC3A-201ENST00000225441 CD55P08174 381 aa20.65■□□□□ 0.9
RUNDC3A-201ENST00000225441 TRGC1P0CF51 173 aa20.65■□□□□ 0.9
RUNDC3A-201ENST00000225441 GPR12P47775 334 aa20.65■□□□□ 0.9
RUNDC3A-201ENST00000225441 C3orf36Q3SXR2 165 aa20.65■□□□□ 0.9
RUNDC3A-201ENST00000225441 Q3ZCU0 254 aa20.65■□□□□ 0.9
RUNDC3A-201ENST00000225441 TIMM23BQ5SRD1 257 aa20.65■□□□□ 0.9
RUNDC3A-201ENST00000225441 LRRC29Q8WV35 223 aa20.65■□□□□ 0.9
RUNDC3A-201ENST00000225441 RAB24Q969Q5 203 aa20.65■□□□□ 0.9
RUNDC3A-201ENST00000225441 NEIL1Q96FI4 390 aaPredicted RBP20.65■□□□□ 0.9
RUNDC3A-201ENST00000225441 PITPNC1Q9UKF7 332 aa20.65■□□□□ 0.9
RUNDC3A-201ENST00000225441 PSG11Q9UQ72 335 aa20.65■□□□□ 0.9
RUNDC3A-201ENST00000225441 IGHV3-64DA0A0J9YX35 117 aa20.64■□□□□ 0.9
RUNDC3A-201ENST00000225441 LINC00473A8K010 186 aa20.64■□□□□ 0.9
RUNDC3A-201ENST00000225441 SRRM5B3KS81 715 aa20.64■□□□□ 0.9
RUNDC3A-201ENST00000225441 DUTP33316 252 aaKnown RBP20.64■□□□□ 0.9
RUNDC3A-201ENST00000225441 SSTR5P35346 364 aa20.64■□□□□ 0.9
RUNDC3A-201ENST00000225441 FAM27E3Q08E93 113 aa20.64■□□□□ 0.9
RUNDC3A-201ENST00000225441 BTNL3Q6UXE8 466 aa20.64■□□□□ 0.9
RUNDC3A-201ENST00000225441 LURAP1LQ8IV03 231 aa20.64■□□□□ 0.9
RUNDC3A-201ENST00000225441 CD177Q8N6Q3 437 aa20.64■□□□□ 0.9
RUNDC3A-201ENST00000225441 ABHD5Q8WTS1 349 aa20.64■□□□□ 0.9
RUNDC3A-201ENST00000225441 OR5B12Q96R08 314 aa20.64■□□□□ 0.9
RUNDC3A-201ENST00000225441 SLC25A22Q9H936 323 aa20.64■□□□□ 0.9
RUNDC3A-201ENST00000225441 ATXN7O15265 892 aaPredicted RBP20.64■□□□□ 0.89
RUNDC3A-201ENST00000225441 RBMXL2O75526 392 aaKnown RBP20.64■□□□□ 0.89
RUNDC3A-201ENST00000225441 FABP6P51161 128 aa20.64■□□□□ 0.89
RUNDC3A-201ENST00000225441 RPL23P62829 140 aaKnown RBP20.64■□□□□ 0.89
RUNDC3A-201ENST00000225441 ADIRFQ15847 76 aa20.64■□□□□ 0.89
RUNDC3A-201ENST00000225441 SPNS3Q6ZMD2 512 aa20.64■□□□□ 0.89
RUNDC3A-201ENST00000225441 FRZBQ92765 325 aa20.64■□□□□ 0.89
RUNDC3A-201ENST00000225441 BTF3L4Q96K17 158 aa20.64■□□□□ 0.89
RUNDC3A-201ENST00000225441 IGHV1-18A0A0C4DH31 117 aa20.63■□□□□ 0.89
RUNDC3A-201ENST00000225441 C15orf62A8K5M9 175 aa20.63■□□□□ 0.89
RUNDC3A-201ENST00000225441 F2RL2O00254 374 aa20.63■□□□□ 0.89
RUNDC3A-201ENST00000225441 UFSP2Q9NUQ7 469 aa20.63■□□□□ 0.89
RUNDC3A-201ENST00000225441 PDE6DO43924 150 aa20.62■□□□□ 0.89
RUNDC3A-201ENST00000225441 PARLQ9H300 379 aa20.62■□□□□ 0.89
RUNDC3A-201ENST00000225441 OR6C3Q9NZP0 311 aa20.62■□□□□ 0.89
RUNDC3A-201ENST00000225441 METRNQ9UJH8 293 aa20.62■□□□□ 0.89
RUNDC3A-201ENST00000225441 POLEQ07864 2286 aa20.62■□□□□ 0.89
RUNDC3A-201ENST00000225441 H7BYZ3 331 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms