RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 LURAP1Q96LR2 239 aa15.65■□□□□ 0.1
CLIP2-201ENST00000223398 TNFSF18Q9UNG2 199 aa15.65■□□□□ 0.1
CLIP2-201ENST00000223398 MOSP00540 346 aa15.65■□□□□ 0.1
CLIP2-201ENST00000223398 TFF1P04155 84 aa15.65■□□□□ 0.1
CLIP2-201ENST00000223398 VAMP3Q15836 100 aa15.65■□□□□ 0.1
CLIP2-201ENST00000223398 Q6ZN92 141 aa15.65■□□□□ 0.1
CLIP2-201ENST00000223398 SGK494Q96LW2 274 aa15.65■□□□□ 0.1
CLIP2-201ENST00000223398 PDCD11Q14690 1871 aaKnown RBP15.64■□□□□ 0.1
CLIP2-201ENST00000223398 EFEMP2O95967 443 aa15.64■□□□□ 0.09
CLIP2-201ENST00000223398 HNRNPA3P51991 378 aaKnown RBP15.64■□□□□ 0.09
CLIP2-201ENST00000223398 C1QL1O75973 258 aa15.64■□□□□ 0.09
CLIP2-201ENST00000223398 TNFRSF9Q07011 255 aa15.64■□□□□ 0.09
CLIP2-201ENST00000223398 THADAQ6YHU6 1953 aa15.64■□□□□ 0.09
CLIP2-201ENST00000223398 NPPCP23582 126 aa15.64■□□□□ 0.09
CLIP2-201ENST00000223398 NPIPB3Q92617 1050 aa15.64■□□□□ 0.09
CLIP2-201ENST00000223398 E9PLN8 166 aa15.64■□□□□ 0.09
CLIP2-201ENST00000223398 PGA5P0DJD9 388 aa15.64■□□□□ 0.09
CLIP2-201ENST00000223398 KIR2DL2P43627 348 aaPredicted RBP15.64■□□□□ 0.09
CLIP2-201ENST00000223398 VKORC1Q9BQB6 163 aa15.64■□□□□ 0.09
CLIP2-201ENST00000223398 DCAF16Q9NXF7 216 aa15.64■□□□□ 0.09
CLIP2-201ENST00000223398 IGHV3OR16-8A0A075B7F1 116 aa15.63■□□□□ 0.09
CLIP2-201ENST00000223398 TMEM14DPA8MWL7 114 aa15.63■□□□□ 0.09
CLIP2-201ENST00000223398 SEC11BP0C7V7 166 aa15.63■□□□□ 0.09
CLIP2-201ENST00000223398 SLC16A13Q7RTY0 426 aa15.63■□□□□ 0.09
CLIP2-201ENST00000223398 ALX4Q9H161 411 aaPredicted RBP15.63■□□□□ 0.09
CLIP2-201ENST00000223398 LCTP09848 1927 aa15.63■□□□□ 0.09
CLIP2-201ENST00000223398 H3BQ15 152 aa15.63■□□□□ 0.09
CLIP2-201ENST00000223398 HLA-DRB5Q30154 266 aa15.63■□□□□ 0.09
CLIP2-201ENST00000223398 UNQ9370/PRO34162Q6UXP9 181 aa15.63■□□□□ 0.09
CLIP2-201ENST00000223398 CBLN4Q9NTU7 201 aa15.63■□□□□ 0.09
CLIP2-201ENST00000223398 HSPB7Q9UBY9 170 aa15.63■□□□□ 0.09
CLIP2-201ENST00000223398 SNRPEP62304 92 aaKnown RBP15.63■□□□□ 0.09
CLIP2-201ENST00000223398 EIF4E3Q8N5X7 224 aaKnown RBP15.63■□□□□ 0.09
CLIP2-201ENST00000223398 TUBA4BQ9H853 241 aa15.63■□□□□ 0.09
CLIP2-201ENST00000223398 MRPS18CQ9Y3D5 142 aaKnown RBP15.63■□□□□ 0.09
CLIP2-201ENST00000223398 HSPB1P04792 205 aaKnown RBP15.62■□□□□ 0.09
CLIP2-201ENST00000223398 CCL3L1P16619 93 aa15.62■□□□□ 0.09
CLIP2-201ENST00000223398 PLAURQ03405 335 aa15.62■□□□□ 0.09
CLIP2-201ENST00000223398 ZNF418Q8TF45 676 aaPredicted RBP15.62■□□□□ 0.09
CLIP2-201ENST00000223398 C1QTNF5Q9BXJ0 243 aa15.62■□□□□ 0.09
CLIP2-201ENST00000223398 C5orf66Q9H5L9 145 aa15.62■□□□□ 0.09
CLIP2-201ENST00000223398 AP5S1Q9NUS5 200 aa15.62■□□□□ 0.09
CLIP2-201ENST00000223398 CACNA1BQ00975 2339 aa15.62■□□□□ 0.09
CLIP2-201ENST00000223398 SNURFLB1AK76 121 aa15.62■□□□□ 0.09
CLIP2-201ENST00000223398 NRIP2Q9BQI9 281 aa15.62■□□□□ 0.09
CLIP2-201ENST00000223398 COL6A6A6NMZ7 2263 aa15.62■□□□□ 0.09
CLIP2-201ENST00000223398 PROB1E7EW31 1015 aa15.62■□□□□ 0.09
CLIP2-201ENST00000223398 NDUFB4O95168 129 aa15.62■□□□□ 0.09
CLIP2-201ENST00000223398 IL4P05112 153 aa15.62■□□□□ 0.09
CLIP2-201ENST00000223398 ABLIM2Q6H8Q1 611 aa15.62■□□□□ 0.09
CLIP2-201ENST00000223398 SEMA5BQ9P283 1151 aa15.62■□□□□ 0.09
CLIP2-201ENST00000223398 RNF212Q495C1 297 aa15.62■□□□□ 0.09
CLIP2-201ENST00000223398 OR8A1Q8NGG7 326 aa15.62■□□□□ 0.09
CLIP2-201ENST00000223398 TRAV30A0A087WSZ9 112 aa15.62■□□□□ 0.09
CLIP2-201ENST00000223398 HKR1P10072 659 aa15.62■□□□□ 0.09
CLIP2-201ENST00000223398 MAS1LP35410 378 aa15.61■□□□□ 0.09
CLIP2-201ENST00000223398 POC1AQ8NBT0 407 aa15.61■□□□□ 0.09
CLIP2-201ENST00000223398 AKAP6Q13023 2319 aa15.61■□□□□ 0.09
CLIP2-201ENST00000223398 ZNF236Q9UL36 1845 aa15.61■□□□□ 0.09
CLIP2-201ENST00000223398 TMEM218A2RU14 115 aa15.61■□□□□ 0.09
CLIP2-201ENST00000223398 CD24P25063 80 aa15.61■□□□□ 0.09
CLIP2-201ENST00000223398 TCTAP57738 103 aa15.61■□□□□ 0.09
CLIP2-201ENST00000223398 FUT9Q9Y231 359 aa15.61■□□□□ 0.09
CLIP2-201ENST00000223398 C19orf35Q6ZS72 473 aa15.61■□□□□ 0.09
CLIP2-201ENST00000223398 DNAJC4Q9NNZ3 241 aa15.61■□□□□ 0.09
CLIP2-201ENST00000223398 CHD5Q8TDI0 1954 aa15.61■□□□□ 0.09
CLIP2-201ENST00000223398 IGHV3-11P01762 117 aa15.61■□□□□ 0.09
CLIP2-201ENST00000223398 RELQ04864 619 aaPredicted RBP15.61■□□□□ 0.09
CLIP2-201ENST00000223398 RNF151Q2KHN1 245 aa15.61■□□□□ 0.09
CLIP2-201ENST00000223398 SCGB1D4Q6XE38 83 aa15.61■□□□□ 0.09
CLIP2-201ENST00000223398 OTOFQ9HC10 1997 aa15.6■□□□□ 0.09
CLIP2-201ENST00000223398 SERF2P84101 59 aa15.6■□□□□ 0.09
CLIP2-201ENST00000223398 CD200R1LQ6Q8B3 271 aa15.6■□□□□ 0.09
CLIP2-201ENST00000223398 TAF15Q92804 592 aaKnown RBP eCLIP15.6■□□□□ 0.09
CLIP2-201ENST00000223398 REPIN1Q9BWE0 567 aaKnown RBP15.6■□□□□ 0.09
CLIP2-201ENST00000223398 GPX1P07203 203 aa15.6■□□□□ 0.09
CLIP2-201ENST00000223398 IFITM3Q01628 133 aa15.6■□□□□ 0.09
CLIP2-201ENST00000223398 MPDU1O75352 247 aa15.6■□□□□ 0.09
CLIP2-201ENST00000223398 APCSP02743 223 aa15.6■□□□□ 0.09
CLIP2-201ENST00000223398 C11orf44Q8N8P7 122 aa15.6■□□□□ 0.09
CLIP2-201ENST00000223398 UBE2L6O14933 153 aa15.6■□□□□ 0.09
CLIP2-201ENST00000223398 CCKARP32238 428 aa15.6■□□□□ 0.09
CLIP2-201ENST00000223398 AMMECR1LQ6DCA0 310 aa15.6■□□□□ 0.09
CLIP2-201ENST00000223398 CBLN2Q8IUK8 224 aa15.6■□□□□ 0.09
CLIP2-201ENST00000223398 ISLRO14498 428 aa15.59■□□□□ 0.09
CLIP2-201ENST00000223398 THBDP07204 575 aa15.59■□□□□ 0.09
CLIP2-201ENST00000223398 RPL29P47914 159 aaKnown RBP15.59■□□□□ 0.09
CLIP2-201ENST00000223398 MFAP2P55001 183 aa15.59■□□□□ 0.09
CLIP2-201ENST00000223398 HIST1H1AQ02539 215 aaPredicted RBP15.59■□□□□ 0.09
CLIP2-201ENST00000223398 TMEM30BQ3MIR4 351 aa15.59■□□□□ 0.09
CLIP2-201ENST00000223398 WDFY1Q8IWB7 410 aa15.59■□□□□ 0.09
CLIP2-201ENST00000223398 SYT8Q8NBV8 401 aa15.59■□□□□ 0.09
CLIP2-201ENST00000223398 TP53RKQ96S44 253 aa15.59■□□□□ 0.09
CLIP2-201ENST00000223398 C7orf77A4D0Y5 90 aa15.59■□□□□ 0.09
CLIP2-201ENST00000223398 IQCF6A8MYZ5 107 aa15.59■□□□□ 0.09
CLIP2-201ENST00000223398 FBLIM1Q8WUP2 373 aa15.59■□□□□ 0.09
CLIP2-201ENST00000223398 C12orf57Q99622 126 aa15.59■□□□□ 0.09
CLIP2-201ENST00000223398 IGHV1-18A0A0C4DH31 117 aa15.59■□□□□ 0.09
CLIP2-201ENST00000223398 BCL2P10415 239 aa15.59■□□□□ 0.09
CLIP2-201ENST00000223398 MMP9P14780 707 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms