RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 C17orf98A8MV24 154 aa12.79□□□□□ -0.36
TGFB1-201ENST00000221930 SSTR5P35346 364 aa12.79□□□□□ -0.36
TGFB1-201ENST00000221930 FABP6P51161 128 aa12.79□□□□□ -0.36
TGFB1-201ENST00000221930 SERF2P84101 59 aa12.79□□□□□ -0.36
TGFB1-201ENST00000221930 TMEM41BQ5BJD5 291 aa12.79□□□□□ -0.36
TGFB1-201ENST00000221930 COL5A1-AS1Q5SY13 56 aa12.79□□□□□ -0.36
TGFB1-201ENST00000221930 C11orf53Q8IXP5 236 aa12.79□□□□□ -0.36
TGFB1-201ENST00000221930 PLPPR2Q96GM1 343 aa12.79□□□□□ -0.36
TGFB1-201ENST00000221930 SNX22Q96L94 193 aa12.79□□□□□ -0.36
TGFB1-201ENST00000221930 FTH1P19P0C7X4 201 aa12.78□□□□□ -0.36
TGFB1-201ENST00000221930 TNFSF10P50591 281 aa12.78□□□□□ -0.36
TGFB1-201ENST00000221930 IGFL2Q6UWQ7 119 aa12.78□□□□□ -0.36
TGFB1-201ENST00000221930 COQ2Q96H96 371 aa12.78□□□□□ -0.36
TGFB1-201ENST00000221930 CADP27708 2225 aa12.78□□□□□ -0.36
TGFB1-201ENST00000221930 ODAMA1E959 279 aa12.78□□□□□ -0.36
TGFB1-201ENST00000221930 RNF212BA8MTL3 300 aa12.78□□□□□ -0.36
TGFB1-201ENST00000221930 RBMXL2O75526 392 aaKnown RBP12.78□□□□□ -0.36
TGFB1-201ENST00000221930 PTTG1IPP53801 180 aa12.78□□□□□ -0.36
TGFB1-201ENST00000221930 ZNF705AQ6ZN79 300 aaPredicted RBP12.78□□□□□ -0.36
TGFB1-201ENST00000221930 FAM214BQ7L5A3 538 aa12.78□□□□□ -0.36
TGFB1-201ENST00000221930 LHX4Q969G2 390 aa12.78□□□□□ -0.36
TGFB1-201ENST00000221930 CSTL1Q9H114 145 aa12.78□□□□□ -0.36
TGFB1-201ENST00000221930 HEATR1Q9H583 2144 aaKnown RBP12.77□□□□□ -0.36
TGFB1-201ENST00000221930 J3QW42 95 aa12.77□□□□□ -0.36
TGFB1-201ENST00000221930 ZG16O60844 167 aa12.77□□□□□ -0.36
TGFB1-201ENST00000221930 DEFA4P12838 97 aa12.77□□□□□ -0.36
TGFB1-201ENST00000221930 CCL11P51671 97 aa12.77□□□□□ -0.36
TGFB1-201ENST00000221930 LTC4SQ16873 150 aa12.77□□□□□ -0.36
TGFB1-201ENST00000221930 TMEM95Q3KNT9 176 aa12.77□□□□□ -0.36
TGFB1-201ENST00000221930 VWA1Q6PCB0 445 aa12.77□□□□□ -0.36
TGFB1-201ENST00000221930 TMEM14EPQ6UXP3 125 aa12.77□□□□□ -0.36
TGFB1-201ENST00000221930 OR10G4Q8NGN3 311 aa12.77□□□□□ -0.36
TGFB1-201ENST00000221930 NINJ1Q92982 152 aa12.77□□□□□ -0.36
TGFB1-201ENST00000221930 DCTN5Q9BTE1 182 aa12.77□□□□□ -0.36
TGFB1-201ENST00000221930 SLC25A22Q9H936 323 aa12.77□□□□□ -0.36
TGFB1-201ENST00000221930 HES4Q9HCC6 221 aa12.77□□□□□ -0.36
TGFB1-201ENST00000221930 SLC39A9Q9NUM3 307 aa12.77□□□□□ -0.36
TGFB1-201ENST00000221930 CCL25O15444 150 aa12.77□□□□□ -0.37
TGFB1-201ENST00000221930 NKX2-8O15522 239 aa12.77□□□□□ -0.37
TGFB1-201ENST00000221930 ZNF737O75373 536 aa12.77□□□□□ -0.37
TGFB1-201ENST00000221930 C4orf17Q53FE4 359 aa12.77□□□□□ -0.37
TGFB1-201ENST00000221930 ACSM6Q6P461 480 aa12.77□□□□□ -0.37
TGFB1-201ENST00000221930 Q6ZT83 130 aa12.77□□□□□ -0.37
TGFB1-201ENST00000221930 OR1P1Q8NH06 330 aa12.77□□□□□ -0.37
TGFB1-201ENST00000221930 HSPB7Q9UBY9 170 aa12.77□□□□□ -0.37
TGFB1-201ENST00000221930 ICE1Q9Y2F5 2266 aa12.76□□□□□ -0.37
TGFB1-201ENST00000221930 LRRC30A6NM36 301 aa12.76□□□□□ -0.37
TGFB1-201ENST00000221930 CLCF1Q9UBD9 225 aa12.76□□□□□ -0.37
TGFB1-201ENST00000221930 INTS1Q8N201 2190 aaKnown RBP12.76□□□□□ -0.37
TGFB1-201ENST00000221930 OOEPA6NGQ2 149 aa12.76□□□□□ -0.37
TGFB1-201ENST00000221930 CYB5R3P00387 301 aaPredicted RBP12.76□□□□□ -0.37
TGFB1-201ENST00000221930 MDKP21741 143 aaPredicted RBP12.76□□□□□ -0.37
TGFB1-201ENST00000221930 MRGPRGQ86SM5 289 aa12.76□□□□□ -0.37
TGFB1-201ENST00000221930 NUDT11Q96G61 164 aa12.76□□□□□ -0.37
TGFB1-201ENST00000221930 PCGF1Q9BSM1 259 aa12.76□□□□□ -0.37
TGFB1-201ENST00000221930 SDF2L1Q9HCN8 221 aa12.76□□□□□ -0.37
TGFB1-201ENST00000221930 CBY3A6NI87 242 aa12.75□□□□□ -0.37
TGFB1-201ENST00000221930 LINC00473A8K010 186 aa12.75□□□□□ -0.37
TGFB1-201ENST00000221930 FAM90A26D6RGX4 464 aa12.75□□□□□ -0.37
TGFB1-201ENST00000221930 TIMM8AO60220 97 aaPredicted RBP12.75□□□□□ -0.37
TGFB1-201ENST00000221930 RAB7AP51149 207 aa12.75□□□□□ -0.37
TGFB1-201ENST00000221930 INO80CQ6PI98 192 aaPredicted RBP12.75□□□□□ -0.37
TGFB1-201ENST00000221930 WDR82Q6UXN9 313 aa12.75□□□□□ -0.37
TGFB1-201ENST00000221930 ACP7Q6ZNF0 438 aa12.75□□□□□ -0.37
TGFB1-201ENST00000221930 OR13A1Q8NGR1 328 aa12.75□□□□□ -0.37
TGFB1-201ENST00000221930 GATAD1Q8WUU5 269 aa12.75□□□□□ -0.37
TGFB1-201ENST00000221930 PINX1Q96BK5 328 aaKnown RBP12.75□□□□□ -0.37
TGFB1-201ENST00000221930 COL10A1Q03692 680 aa12.75□□□□□ -0.37
TGFB1-201ENST00000221930 FOXF2Q12947 444 aa12.75□□□□□ -0.37
TGFB1-201ENST00000221930 RNF151Q2KHN1 245 aa12.75□□□□□ -0.37
TGFB1-201ENST00000221930 FDCSPQ8NFU4 85 aa12.75□□□□□ -0.37
TGFB1-201ENST00000221930 ORAOV1Q8WV07 137 aa12.75□□□□□ -0.37
TGFB1-201ENST00000221930 ALKBH7Q9BT30 221 aaPredicted RBP12.75□□□□□ -0.37
TGFB1-201ENST00000221930 ELOVL1Q9BW60 279 aa12.75□□□□□ -0.37
TGFB1-201ENST00000221930 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.75□□□□□ -0.37
TGFB1-201ENST00000221930 B4DEV8 164 aa12.75□□□□□ -0.37
TGFB1-201ENST00000221930 CLDN34H7C241 214 aa12.75□□□□□ -0.37
TGFB1-201ENST00000221930 P0C879 139 aa12.75□□□□□ -0.37
TGFB1-201ENST00000221930 TFF3Q07654 80 aa12.75□□□□□ -0.37
TGFB1-201ENST00000221930 EIF4EBP1Q13541 118 aaPredicted RBP12.75□□□□□ -0.37
TGFB1-201ENST00000221930 EDDM3AQ14507 147 aa12.75□□□□□ -0.37
TGFB1-201ENST00000221930 MSMO1Q15800 293 aa12.75□□□□□ -0.37
TGFB1-201ENST00000221930 TMEM241Q24JQ0 296 aa12.75□□□□□ -0.37
TGFB1-201ENST00000221930 WDR25Q64LD2 544 aaPredicted RBP12.75□□□□□ -0.37
TGFB1-201ENST00000221930 SLC35E4Q6ICL7 350 aa12.75□□□□□ -0.37
TGFB1-201ENST00000221930 RPUSD4Q96CM3 377 aaKnown RBP12.75□□□□□ -0.37
TGFB1-201ENST00000221930 PSG11Q9UQ72 335 aa12.75□□□□□ -0.37
TGFB1-201ENST00000221930 POLR3KQ9Y2Y1 108 aaPredicted RBP12.75□□□□□ -0.37
TGFB1-201ENST00000221930 C1QTNF9BB2RNN3 333 aa12.74□□□□□ -0.37
TGFB1-201ENST00000221930 IGKV3-15P01624 115 aa12.74□□□□□ -0.37
TGFB1-201ENST00000221930 IGHV3-13P01766 116 aa12.74□□□□□ -0.37
TGFB1-201ENST00000221930 IGHV3-7P01780 117 aa12.74□□□□□ -0.37
TGFB1-201ENST00000221930 CCKARP32238 428 aa12.74□□□□□ -0.37
TGFB1-201ENST00000221930 KIR2DL2P43627 348 aaPredicted RBP12.74□□□□□ -0.37
TGFB1-201ENST00000221930 PNRC1Q12796 327 aaPredicted RBP12.74□□□□□ -0.37
TGFB1-201ENST00000221930 ADIRFQ15847 76 aa12.74□□□□□ -0.37
TGFB1-201ENST00000221930 C1orf87Q8N0U7 546 aa12.74□□□□□ -0.37
TGFB1-201ENST00000221930 WDR31Q8NA23 367 aa12.74□□□□□ -0.37
TGFB1-201ENST00000221930 SMIM7Q9BQ49 75 aa12.74□□□□□ -0.37
TGFB1-201ENST00000221930 AURKAIP1Q9NWT8 199 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms