RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 COLCA1Q6ZS62 124 aa11.5□□□□□ -0.57
GABPB1-201ENST00000220429 TMEM105Q8N8V8 129 aa11.5□□□□□ -0.57
GABPB1-201ENST00000220429 OR51T1Q8NGJ9 327 aa11.5□□□□□ -0.57
GABPB1-201ENST00000220429 NABP1Q96AH0 204 aa11.5□□□□□ -0.57
GABPB1-201ENST00000220429 SPSB1Q96BD6 273 aa11.5□□□□□ -0.57
GABPB1-201ENST00000220429 SRXN1Q9BYN0 137 aa11.5□□□□□ -0.57
GABPB1-201ENST00000220429 SLC39A9Q9NUM3 307 aa11.5□□□□□ -0.57
GABPB1-201ENST00000220429 KNTC1P50748 2209 aa11.49□□□□□ -0.57
GABPB1-201ENST00000220429 H0YJW9 148 aa11.49□□□□□ -0.57
GABPB1-201ENST00000220429 FCN1O00602 326 aa11.49□□□□□ -0.57
GABPB1-201ENST00000220429 PLP1P60201 277 aa11.49□□□□□ -0.57
GABPB1-201ENST00000220429 GRB2P62993 217 aaKnown RBP11.49□□□□□ -0.57
GABPB1-201ENST00000220429 PSG4Q00888 419 aa11.49□□□□□ -0.57
GABPB1-201ENST00000220429 CLEC7AQ9BXN2 247 aa11.49□□□□□ -0.57
GABPB1-201ENST00000220429 LOXL2Q9Y4K0 774 aa11.49□□□□□ -0.57
GABPB1-201ENST00000220429 KIAA1324LA8MWY0 1029 aaPredicted RBP11.49□□□□□ -0.57
GABPB1-201ENST00000220429 FUT6P51993 359 aa11.49□□□□□ -0.57
GABPB1-201ENST00000220429 RRADP55042 308 aa11.49□□□□□ -0.57
GABPB1-201ENST00000220429 B3GALT5-AS1P59052 145 aa11.49□□□□□ -0.57
GABPB1-201ENST00000220429 ARF1P84077 181 aaKnown RBP11.49□□□□□ -0.57
GABPB1-201ENST00000220429 IGFBP7Q16270 282 aa11.49□□□□□ -0.57
GABPB1-201ENST00000220429 FOXL2NBQ6ZUU3 175 aa11.49□□□□□ -0.57
GABPB1-201ENST00000220429 OR2AE1Q8NHA4 323 aa11.49□□□□□ -0.57
GABPB1-201ENST00000220429 WDR61Q9GZS3 305 aaKnown RBP11.49□□□□□ -0.57
GABPB1-201ENST00000220429 CCNOP22674 350 aa11.48□□□□□ -0.57
GABPB1-201ENST00000220429 BLVRBP30043 206 aaPredicted RBP11.48□□□□□ -0.57
GABPB1-201ENST00000220429 FXYD4P59646 89 aa11.48□□□□□ -0.57
GABPB1-201ENST00000220429 SRSF7Q16629 238 aaKnown RBP eCLIP11.48□□□□□ -0.57
GABPB1-201ENST00000220429 TCTEX1D4Q5JR98 221 aa11.48□□□□□ -0.57
GABPB1-201ENST00000220429 RNFT1Q5M7Z0 435 aa11.48□□□□□ -0.57
GABPB1-201ENST00000220429 YRDCQ86U90 279 aaKnown RBP11.48□□□□□ -0.57
GABPB1-201ENST00000220429 CT55Q8WUE5 264 aa11.48□□□□□ -0.57
GABPB1-201ENST00000220429 ABHD14BQ96IU4 210 aa11.48□□□□□ -0.57
GABPB1-201ENST00000220429 EAF1Q96JC9 268 aaPredicted RBP11.48□□□□□ -0.57
GABPB1-201ENST00000220429 SPIN2AQ99865 258 aa11.48□□□□□ -0.57
GABPB1-201ENST00000220429 SPIN2BQ9BPZ2 258 aa11.48□□□□□ -0.57
GABPB1-201ENST00000220429 PSMG3Q9BT73 122 aaPredicted RBP11.48□□□□□ -0.57
GABPB1-201ENST00000220429 TP73-AS1Q9UF72 201 aa11.48□□□□□ -0.57
GABPB1-201ENST00000220429 K7EQM0 130 aa11.48□□□□□ -0.57
GABPB1-201ENST00000220429 DHHO43323 396 aa11.48□□□□□ -0.57
GABPB1-201ENST00000220429 SERF2P84101 59 aa11.48□□□□□ -0.57
GABPB1-201ENST00000220429 ODF1Q14990 250 aa11.48□□□□□ -0.57
GABPB1-201ENST00000220429 DOK3Q7L591 496 aa11.48□□□□□ -0.57
GABPB1-201ENST00000220429 DTX1Q86Y01 620 aa11.48□□□□□ -0.57
GABPB1-201ENST00000220429 ZNF837Q96EG3 531 aaPredicted RBP11.48□□□□□ -0.57
GABPB1-201ENST00000220429 NEIL1Q96FI4 390 aaPredicted RBP11.48□□□□□ -0.57
GABPB1-201ENST00000220429 GMPPAQ96IJ6 420 aaPredicted RBP11.48□□□□□ -0.57
GABPB1-201ENST00000220429 FNDC4Q9H6D8 234 aaPredicted RBP11.48□□□□□ -0.57
GABPB1-201ENST00000220429 PLEKHJ1Q9NW61 149 aa11.48□□□□□ -0.57
GABPB1-201ENST00000220429 TAAR3PQ9P1P4 343 aa11.48□□□□□ -0.57
GABPB1-201ENST00000220429 C1QTNF9BB2RNN3 333 aa11.47□□□□□ -0.57
GABPB1-201ENST00000220429 CHST1O43916 411 aa11.47□□□□□ -0.57
GABPB1-201ENST00000220429 C1QTNF9P0C862 333 aa11.47□□□□□ -0.57
GABPB1-201ENST00000220429 NPBWR2P48146 333 aa11.47□□□□□ -0.57
GABPB1-201ENST00000220429 RHOBP62745 196 aa11.47□□□□□ -0.57
GABPB1-201ENST00000220429 HSD52Q0P140 79 aa11.47□□□□□ -0.57
GABPB1-201ENST00000220429 RSPO1Q2MKA7 263 aaPredicted RBP11.47□□□□□ -0.57
GABPB1-201ENST00000220429 C6orf15Q6UXA7 325 aaPredicted RBP11.47□□□□□ -0.57
GABPB1-201ENST00000220429 ASCL4Q6XD76 172 aa11.47□□□□□ -0.57
GABPB1-201ENST00000220429 GJC3Q8NFK1 279 aa11.47□□□□□ -0.57
GABPB1-201ENST00000220429 OR5P3Q8WZ94 311 aa11.47□□□□□ -0.57
GABPB1-201ENST00000220429 ST6GALNAC6Q969X2 333 aa11.47□□□□□ -0.57
GABPB1-201ENST00000220429 LYZL4Q96KX0 146 aa11.47□□□□□ -0.57
GABPB1-201ENST00000220429 RCHY1Q96PM5 261 aa11.47□□□□□ -0.57
GABPB1-201ENST00000220429 IGKV1-9A0A0C4DH69 117 aa11.47□□□□□ -0.57
GABPB1-201ENST00000220429 FAM231BA6NCW3 169 aa11.47□□□□□ -0.57
GABPB1-201ENST00000220429 F5H5K5 113 aa11.47□□□□□ -0.57
GABPB1-201ENST00000220429 IGLV3-1P01715 115 aa11.47□□□□□ -0.57
GABPB1-201ENST00000220429 P04436 131 aa11.47□□□□□ -0.57
GABPB1-201ENST00000220429 RFPL3SP0C7P2 107 aa11.47□□□□□ -0.57
GABPB1-201ENST00000220429 GATA2P23769 480 aaPredicted RBP11.47□□□□□ -0.57
GABPB1-201ENST00000220429 SRD5A2P31213 254 aa11.47□□□□□ -0.57
GABPB1-201ENST00000220429 ZNF90Q03938 601 aa11.47□□□□□ -0.57
GABPB1-201ENST00000220429 GTF3C1Q12789 2109 aa11.47□□□□□ -0.57
GABPB1-201ENST00000220429 DMRTC1Q5HYR2 192 aa11.47□□□□□ -0.57
GABPB1-201ENST00000220429 OR10J3Q5JRS4 329 aa11.47□□□□□ -0.57
GABPB1-201ENST00000220429 OR5A2Q8NGI9 324 aa11.47□□□□□ -0.57
GABPB1-201ENST00000220429 SSC4DQ8WTU2 575 aa11.47□□□□□ -0.57
GABPB1-201ENST00000220429 ARRDC1-AS1Q9H2J1 176 aa11.47□□□□□ -0.57
GABPB1-201ENST00000220429 GEMIN7Q9H840 131 aaKnown RBP11.47□□□□□ -0.57
GABPB1-201ENST00000220429 ANXA10Q9UJ72 324 aa11.47□□□□□ -0.57
GABPB1-201ENST00000220429 SELENOKQ9Y6D0 94 aa11.47□□□□□ -0.57
GABPB1-201ENST00000220429 C7orf71A4D174 169 aa11.46□□□□□ -0.57
GABPB1-201ENST00000220429 RBMXL2O75526 392 aaKnown RBP11.46□□□□□ -0.57
GABPB1-201ENST00000220429 FAM19A2Q8N3H0 131 aa11.46□□□□□ -0.57
GABPB1-201ENST00000220429 GATAD1Q8WUU5 269 aa11.46□□□□□ -0.57
GABPB1-201ENST00000220429 NINJ1Q92982 152 aa11.46□□□□□ -0.57
GABPB1-201ENST00000220429 PLEK2Q9NYT0 353 aa11.46□□□□□ -0.57
GABPB1-201ENST00000220429 SPAARA0A1B0GVQ0 90 aa11.46□□□□□ -0.58
GABPB1-201ENST00000220429 ZNF883P0CG24 379 aa11.46□□□□□ -0.58
GABPB1-201ENST00000220429 GGNQ86UU5 652 aa11.46□□□□□ -0.58
GABPB1-201ENST00000220429 ULBP2Q9BZM5 246 aa11.46□□□□□ -0.58
GABPB1-201ENST00000220429 MCTS1Q9ULC4 181 aaKnown RBP11.46□□□□□ -0.58
GABPB1-201ENST00000220429 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.45□□□□□ -0.58
GABPB1-201ENST00000220429 MDFIC2A0A1B0GVS7 189 aa11.45□□□□□ -0.58
GABPB1-201ENST00000220429 ZNF850A8MQ14 1090 aa11.45□□□□□ -0.58
GABPB1-201ENST00000220429 SNURFLB1AK76 121 aa11.45□□□□□ -0.58
GABPB1-201ENST00000220429 NTF4P34130 210 aa11.45□□□□□ -0.58
GABPB1-201ENST00000220429 IER3P46695 156 aa11.45□□□□□ -0.58
GABPB1-201ENST00000220429 Q56UQ5 140 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms