RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 SNRPD3P62318 126 aaKnown RBP11.62□□□□□ -0.55
SIX4-201ENST00000216513 TMEM219Q86XT9 240 aa11.62□□□□□ -0.55
SIX4-201ENST00000216513 OR2A7Q96R45 310 aa11.62□□□□□ -0.55
SIX4-201ENST00000216513 RSG1Q9BU20 258 aa11.62□□□□□ -0.55
SIX4-201ENST00000216513 NRIP2Q9BQI9 281 aa11.62□□□□□ -0.55
SIX4-201ENST00000216513 PEMTQ9UBM1 199 aa11.62□□□□□ -0.55
SIX4-201ENST00000216513 KCNK7Q9Y2U2 307 aa11.62□□□□□ -0.55
SIX4-201ENST00000216513 VWA8A3KMH1 1905 aa11.62□□□□□ -0.55
SIX4-201ENST00000216513 VAMP8Q9BV40 100 aa11.62□□□□□ -0.55
SIX4-201ENST00000216513 SLC35E4Q6ICL7 350 aa11.61□□□□□ -0.55
SIX4-201ENST00000216513 IQCF6A8MYZ5 107 aa11.61□□□□□ -0.55
SIX4-201ENST00000216513 CST4P01036 141 aa11.61□□□□□ -0.55
SIX4-201ENST00000216513 RAB5AP20339 215 aa11.61□□□□□ -0.55
SIX4-201ENST00000216513 NPPCP23582 126 aa11.61□□□□□ -0.55
SIX4-201ENST00000216513 SCAND1P57086 179 aa11.61□□□□□ -0.55
SIX4-201ENST00000216513 RANP62826 216 aaKnown RBP11.61□□□□□ -0.55
SIX4-201ENST00000216513 VMO1Q7Z5L0 202 aa11.61□□□□□ -0.55
SIX4-201ENST00000216513 LRRC75AQ8NAA5 344 aa11.61□□□□□ -0.55
SIX4-201ENST00000216513 LPAR5Q9H1C0 372 aa11.61□□□□□ -0.55
SIX4-201ENST00000216513 TMEM56-RWDD3S4R434 201 aa11.61□□□□□ -0.55
SIX4-201ENST00000216513 HYPMO75409 117 aa11.61□□□□□ -0.55
SIX4-201ENST00000216513 SAP30O75446 220 aa11.61□□□□□ -0.55
SIX4-201ENST00000216513 TMEM241Q24JQ0 296 aa11.61□□□□□ -0.55
SIX4-201ENST00000216513 STPG3Q8N7X2 389 aa11.61□□□□□ -0.55
SIX4-201ENST00000216513 MBD3L4A6NDZ8 208 aaPredicted RBP11.61□□□□□ -0.55
SIX4-201ENST00000216513 MBD3L3A6NE82 208 aaPredicted RBP11.61□□□□□ -0.55
SIX4-201ENST00000216513 MBD3L5A6NJ08 208 aaPredicted RBP11.61□□□□□ -0.55
SIX4-201ENST00000216513 IL24Q13007 206 aa11.61□□□□□ -0.55
SIX4-201ENST00000216513 PRNTQ86SH4 94 aa11.61□□□□□ -0.55
SIX4-201ENST00000216513 MBD3L2Q8NHZ7 208 aaPredicted RBP11.61□□□□□ -0.55
SIX4-201ENST00000216513 MMP26Q9NRE1 261 aa11.61□□□□□ -0.55
SIX4-201ENST00000216513 YTHDF2Q9Y5A9 579 aaKnown RBP11.61□□□□□ -0.55
SIX4-201ENST00000216513 GALP22466 123 aa11.6□□□□□ -0.55
SIX4-201ENST00000216513 SLC6A1P30531 599 aa11.6□□□□□ -0.55
SIX4-201ENST00000216513 RLFQ13129 1914 aa11.6□□□□□ -0.55
SIX4-201ENST00000216513 MOSP00540 346 aa11.6□□□□□ -0.55
SIX4-201ENST00000216513 NUTF2P61970 127 aaKnown RBP11.6□□□□□ -0.55
SIX4-201ENST00000216513 AWAT1Q58HT5 328 aa11.6□□□□□ -0.55
SIX4-201ENST00000216513 GGNQ86UU5 652 aa11.6□□□□□ -0.55
SIX4-201ENST00000216513 POLEQ07864 2286 aa11.6□□□□□ -0.55
SIX4-201ENST00000216513 FAM157CP0CG43 387 aa11.6□□□□□ -0.55
SIX4-201ENST00000216513 KLRD1Q13241 179 aa11.6□□□□□ -0.55
SIX4-201ENST00000216513 CLEC19AQ6UXS0 136 aa11.6□□□□□ -0.55
SIX4-201ENST00000216513 ANK1P16157 1881 aa11.6□□□□□ -0.55
SIX4-201ENST00000216513 TANC1Q9C0D5 1861 aa11.6□□□□□ -0.55
SIX4-201ENST00000216513 LRRC75BQ2VPJ9 315 aa11.6□□□□□ -0.55
SIX4-201ENST00000216513 C11orf91Q3C1V1 193 aa11.6□□□□□ -0.55
SIX4-201ENST00000216513 OR2D3Q8NGH3 330 aa11.6□□□□□ -0.55
SIX4-201ENST00000216513 QTRT1Q9BXR0 403 aaKnown RBP11.6□□□□□ -0.55
SIX4-201ENST00000216513 IL36RNQ9UBH0 155 aa11.6□□□□□ -0.55
SIX4-201ENST00000216513 FBXL7Q9UJT9 491 aa11.6□□□□□ -0.55
SIX4-201ENST00000216513 RND2P52198 227 aa11.59□□□□□ -0.55
SIX4-201ENST00000216513 EWSR1Q01844 656 aaKnown RBP eCLIP11.59□□□□□ -0.55
SIX4-201ENST00000216513 IRF3Q14653 427 aa11.59□□□□□ -0.55
SIX4-201ENST00000216513 TMEM78Q5T7P6 136 aa11.59□□□□□ -0.55
SIX4-201ENST00000216513 ARPC1AQ92747 370 aa11.59□□□□□ -0.55
SIX4-201ENST00000216513 C11orf94C9JXX5 98 aa11.59□□□□□ -0.55
SIX4-201ENST00000216513 CD99P14209 185 aa11.59□□□□□ -0.55
SIX4-201ENST00000216513 SRSF7Q16629 238 aaKnown RBP eCLIP11.59□□□□□ -0.55
SIX4-201ENST00000216513 C3orf36Q3SXR2 165 aa11.59□□□□□ -0.55
SIX4-201ENST00000216513 CD1BP29016 333 aa11.59□□□□□ -0.55
SIX4-201ENST00000216513 ATP6V1FQ16864 119 aa11.59□□□□□ -0.55
SIX4-201ENST00000216513 ZNF474Q6S9Z5 364 aaPredicted RBP11.59□□□□□ -0.55
SIX4-201ENST00000216513 TEPPQ6URK8 271 aa11.59□□□□□ -0.55
SIX4-201ENST00000216513 SAXO1Q8IYX7 474 aa11.59□□□□□ -0.55
SIX4-201ENST00000216513 RGS13O14921 159 aa11.59□□□□□ -0.55
SIX4-201ENST00000216513 ZNF841Q6ZN19 808 aa11.59□□□□□ -0.55
SIX4-201ENST00000216513 LINC00299Q6ZSB3 139 aa11.59□□□□□ -0.55
SIX4-201ENST00000216513 GTF2H5Q6ZYL4 71 aa11.59□□□□□ -0.55
SIX4-201ENST00000216513 LHFPL4Q7Z7J7 247 aa11.59□□□□□ -0.55
SIX4-201ENST00000216513 C5orf17Q8NAS9 161 aa11.59□□□□□ -0.55
SIX4-201ENST00000216513 CORTO00230 105 aa11.58□□□□□ -0.56
SIX4-201ENST00000216513 WNT2P09544 360 aa11.58□□□□□ -0.56
SIX4-201ENST00000216513 DLK1P80370 383 aa11.58□□□□□ -0.56
SIX4-201ENST00000216513 FAM110DQ8TAY7 271 aaPredicted RBP11.58□□□□□ -0.56
SIX4-201ENST00000216513 RBFOX3A6NFN3 312 aa11.58□□□□□ -0.56
SIX4-201ENST00000216513 PRSS54Q6PEW0 395 aa11.58□□□□□ -0.56
SIX4-201ENST00000216513 DTX1Q86Y01 620 aa11.58□□□□□ -0.56
SIX4-201ENST00000216513 POC1AQ8NBT0 407 aa11.58□□□□□ -0.56
SIX4-201ENST00000216513 TOLLIPQ9H0E2 274 aa11.58□□□□□ -0.56
SIX4-201ENST00000216513 WDFY2Q96P53 400 aa11.58□□□□□ -0.56
SIX4-201ENST00000216513 MARVELD1Q9BSK0 173 aa11.58□□□□□ -0.56
SIX4-201ENST00000216513 SLC25A15Q9Y619 301 aa11.58□□□□□ -0.56
SIX4-201ENST00000216513 SNRNP200O75643 2136 aaKnown RBP11.58□□□□□ -0.56
SIX4-201ENST00000216513 ANKRD36A6QL64 1941 aa11.58□□□□□ -0.56
SIX4-201ENST00000216513 M0QZK8 103 aa11.58□□□□□ -0.56
SIX4-201ENST00000216513 TM4SF5O14894 197 aa11.58□□□□□ -0.56
SIX4-201ENST00000216513 UBE2L6O14933 153 aa11.58□□□□□ -0.56
SIX4-201ENST00000216513 SNCGO76070 127 aa11.58□□□□□ -0.56
SIX4-201ENST00000216513 OTX1P32242 354 aaPredicted RBP11.58□□□□□ -0.56
SIX4-201ENST00000216513 RPL29P47914 159 aaKnown RBP11.58□□□□□ -0.56
SIX4-201ENST00000216513 Q5BKY6 102 aa11.58□□□□□ -0.56
SIX4-201ENST00000216513 C1QTNF5Q9BXJ0 243 aa11.58□□□□□ -0.56
SIX4-201ENST00000216513 G6PC2Q9NQR9 355 aa11.58□□□□□ -0.56
SIX4-201ENST00000216513 PLXNA4Q9HCM2 1894 aa11.58□□□□□ -0.56
SIX4-201ENST00000216513 CACNA1HO95180 2353 aa11.58□□□□□ -0.56
SIX4-201ENST00000216513 MUC21A0A0G2JKD1 596 aa11.58□□□□□ -0.56
SIX4-201ENST00000216513 MUC21A0A140T8X8 626 aa11.58□□□□□ -0.56
SIX4-201ENST00000216513 NPIPB9F8W1W9 429 aa11.58□□□□□ -0.56
SIX4-201ENST00000216513 PRR31Q5SQ13 230 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms