RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 PSG1P11464 419 aa8.96□□□□□ -0.98
VCL-201ENST00000211998 TSPAN7P41732 249 aa8.96□□□□□ -0.98
VCL-201ENST00000211998 LGALS7P47929 136 aa8.96□□□□□ -0.98
VCL-201ENST00000211998 CSRP3P50461 194 aa8.96□□□□□ -0.98
VCL-201ENST00000211998 ZNF818PQ6ZRF7 136 aa8.96□□□□□ -0.98
VCL-201ENST00000211998 TMEM186Q96B77 213 aa8.96□□□□□ -0.98
VCL-201ENST00000211998 GPR35Q9HC97 309 aa8.96□□□□□ -0.98
VCL-201ENST00000211998 NHP2Q9NX24 153 aaKnown RBP8.96□□□□□ -0.98
VCL-201ENST00000211998 TRAV30A0A087WSZ9 112 aa8.95□□□□□ -0.98
VCL-201ENST00000211998 TMEM14DPA8MWL7 114 aa8.95□□□□□ -0.98
VCL-201ENST00000211998 A8MWP6 167 aa8.95□□□□□ -0.98
VCL-201ENST00000211998 SCO2A0A1W2PP80 73 aa8.95□□□□□ -0.98
VCL-201ENST00000211998 H0YIZ8 118 aa8.95□□□□□ -0.98
VCL-201ENST00000211998 IGKV1D-16P01601 117 aa8.95□□□□□ -0.98
VCL-201ENST00000211998 C8orf88P0DMB2 117 aa8.95□□□□□ -0.98
VCL-201ENST00000211998 APELAP0DMC3 54 aa8.95□□□□□ -0.98
VCL-201ENST00000211998 LIFP15018 202 aa8.95□□□□□ -0.98
VCL-201ENST00000211998 ATP5G3P48201 142 aa8.95□□□□□ -0.98
VCL-201ENST00000211998 CCL20P78556 96 aa8.95□□□□□ -0.98
VCL-201ENST00000211998 TCF24Q7RTU0 167 aa8.95□□□□□ -0.98
VCL-201ENST00000211998 HARBI1Q96MB7 349 aa8.95□□□□□ -0.98
VCL-201ENST00000211998 SSBP4Q9BWG4 385 aaPredicted RBP8.95□□□□□ -0.98
VCL-201ENST00000211998 CYSLTR1Q9Y271 337 aa8.95□□□□□ -0.98
VCL-201ENST00000211998 TRBV24-1A0A075B6N3 115 aa8.95□□□□□ -0.98
VCL-201ENST00000211998 A0A1W2PPV9 198 aa8.95□□□□□ -0.98
VCL-201ENST00000211998 CEACAM18A8MTB9 384 aa8.95□□□□□ -0.98
VCL-201ENST00000211998 LRRC75BQ2VPJ9 315 aa8.95□□□□□ -0.98
VCL-201ENST00000211998 MRPL52Q86TS9 123 aaKnown RBP8.95□□□□□ -0.98
VCL-201ENST00000211998 KLK15Q9H2R5 256 aa8.95□□□□□ -0.98
VCL-201ENST00000211998 MS4A5Q9H3V2 200 aa8.95□□□□□ -0.98
VCL-201ENST00000211998 A0A0U1RQV5 110 aa8.95□□□□□ -0.98
VCL-201ENST00000211998 UMODP07911 640 aa8.95□□□□□ -0.98
VCL-201ENST00000211998 LINC00470Q9BZP3 86 aa8.95□□□□□ -0.98
VCL-201ENST00000211998 F2RL2O00254 374 aa8.94□□□□□ -0.98
VCL-201ENST00000211998 ZIC3O60481 467 aa8.94□□□□□ -0.98
VCL-201ENST00000211998 TFF2Q03403 129 aa8.94□□□□□ -0.98
VCL-201ENST00000211998 ADRA2AP08913 450 aa8.94□□□□□ -0.98
VCL-201ENST00000211998 NPSP0C0P6 89 aa8.94□□□□□ -0.98
VCL-201ENST00000211998 SFTPA1Q8IWL2 248 aa8.94□□□□□ -0.98
VCL-201ENST00000211998 PNKDQ8N490 385 aa8.94□□□□□ -0.98
VCL-201ENST00000211998 DTX4Q9Y2E6 619 aa8.94□□□□□ -0.98
VCL-201ENST00000211998 GZMBP10144 247 aa8.94□□□□□ -0.98
VCL-201ENST00000211998 TMEM95Q3KNT9 176 aa8.94□□□□□ -0.98
VCL-201ENST00000211998 SFTPA2Q8IWL1 248 aa8.94□□□□□ -0.98
VCL-201ENST00000211998 OR4X2Q8NGF9 303 aa8.94□□□□□ -0.98
VCL-201ENST00000211998 DIRC2Q96SL1 478 aa8.94□□□□□ -0.98
VCL-201ENST00000211998 NAA38Q9BRA0 125 aaKnown RBP8.94□□□□□ -0.98
VCL-201ENST00000211998 CCL3P10147 92 aa8.94□□□□□ -0.98
VCL-201ENST00000211998 COX5BP10606 129 aa8.94□□□□□ -0.98
VCL-201ENST00000211998 SEC11AP67812 179 aa8.94□□□□□ -0.98
VCL-201ENST00000211998 MBNL2Q5VZF2 373 aaKnown RBP8.94□□□□□ -0.98
VCL-201ENST00000211998 ZFAND6Q6FIF0 208 aa8.94□□□□□ -0.98
VCL-201ENST00000211998 ZNF645Q8N7E2 425 aa8.94□□□□□ -0.98
VCL-201ENST00000211998 FSCN3Q9NQT6 498 aa8.94□□□□□ -0.98
VCL-201ENST00000211998 TMPRSS2O15393 492 aa8.94□□□□□ -0.98
VCL-201ENST00000211998 NGFRP08138 427 aa8.94□□□□□ -0.98
VCL-201ENST00000211998 FTH1P19P0C7X4 201 aa8.94□□□□□ -0.98
VCL-201ENST00000211998 C1QTNF9P0C862 333 aa8.94□□□□□ -0.98
VCL-201ENST00000211998 GCSAMLQ5JQS6 135 aa8.94□□□□□ -0.98
VCL-201ENST00000211998 SAMD5Q5TGI4 173 aa8.94□□□□□ -0.98
VCL-201ENST00000211998 G6PC2Q9NQR9 355 aa8.94□□□□□ -0.98
VCL-201ENST00000211998 IGLV1-36A0A0B4J1U3 117 aa8.93□□□□□ -0.98
VCL-201ENST00000211998 TMEM262E9PQX1 116 aa8.93□□□□□ -0.98
VCL-201ENST00000211998 K7N7A8 449 aa8.93□□□□□ -0.98
VCL-201ENST00000211998 DXOO77932 396 aaKnown RBP8.93□□□□□ -0.98
VCL-201ENST00000211998 FGF12P61328 243 aa8.93□□□□□ -0.98
VCL-201ENST00000211998 ZNF788Q6ZQV5 615 aa8.93□□□□□ -0.98
VCL-201ENST00000211998 NFAM1Q8NET5 270 aaPredicted RBP8.93□□□□□ -0.98
VCL-201ENST00000211998 NPCDR1Q9BY65 106 aa8.93□□□□□ -0.98
VCL-201ENST00000211998 TMEM242Q9NWH2 141 aa8.93□□□□□ -0.98
VCL-201ENST00000211998 RRHO14718 337 aa8.93□□□□□ -0.98
VCL-201ENST00000211998 SPINT1O43278 529 aa8.93□□□□□ -0.98
VCL-201ENST00000211998 TMEM50AO95807 157 aa8.93□□□□□ -0.98
VCL-201ENST00000211998 LINC01590Q5TEZ4 76 aa8.93□□□□□ -0.98
VCL-201ENST00000211998 FBXW9Q5XUX1 488 aa8.93□□□□□ -0.98
VCL-201ENST00000211998 MOGAT3Q86VF5 341 aa8.93□□□□□ -0.98
VCL-201ENST00000211998 PPIAL4EA0A075B759 164 aa8.93□□□□□ -0.98
VCL-201ENST00000211998 GAGE12BA1L429 117 aa8.93□□□□□ -0.98
VCL-201ENST00000211998 PPIAL4FP0DN26 164 aa8.93□□□□□ -0.98
VCL-201ENST00000211998 CA7P43166 264 aa8.93□□□□□ -0.98
VCL-201ENST00000211998 SFTA2Q6UW10 78 aa8.93□□□□□ -0.98
VCL-201ENST00000211998 OR4C13Q8NGP0 309 aa8.93□□□□□ -0.98
VCL-201ENST00000211998 SNHG12Q9BXW3 62 aa8.93□□□□□ -0.98
VCL-201ENST00000211998 ST20Q9HBF5 79 aa8.93□□□□□ -0.98
VCL-201ENST00000211998 RAXQ9Y2V3 346 aa8.93□□□□□ -0.98
VCL-201ENST00000211998 PPIAL4AQ9Y536 164 aa8.93□□□□□ -0.98
VCL-201ENST00000211998 MARF1Q9Y4F3 1742 aaKnown RBP8.93□□□□□ -0.98
VCL-201ENST00000211998 IL11P20809 199 aa8.93□□□□□ -0.98
VCL-201ENST00000211998 TBR1Q16650 682 aa8.93□□□□□ -0.98
VCL-201ENST00000211998 Q96M66 194 aa8.93□□□□□ -0.98
VCL-201ENST00000211998 ZNF646O15015 1829 aaPredicted RBP8.93□□□□□ -0.98
VCL-201ENST00000211998 TRIP11Q15643 1979 aa8.92□□□□□ -0.98
VCL-201ENST00000211998 IZUMO1RA6ND01 250 aa8.92□□□□□ -0.98
VCL-201ENST00000211998 C16orf97H3BN30 126 aa8.92□□□□□ -0.98
VCL-201ENST00000211998 ADCYAP1P18509 176 aa8.92□□□□□ -0.98
VCL-201ENST00000211998 PMS2CLQ68D20 193 aa8.92□□□□□ -0.98
VCL-201ENST00000211998 C9orf40Q8IXQ3 194 aa8.92□□□□□ -0.98
VCL-201ENST00000211998 STPG3Q8N7X2 389 aa8.92□□□□□ -0.98
VCL-201ENST00000211998 TMEM52Q8NDY8 209 aa8.92□□□□□ -0.98
VCL-201ENST00000211998 SPAG8Q99932 426 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms