RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Defa37K9J724 93 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Defa5P28312 93 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Ppp2cbP62715 309 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Bex6Q3TZW7 114 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Ip6k3Q8BWD2 396 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Anxa10Q9QZ10 324 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Ca14Q9WVT6 337 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Fgf9P54130 208 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 AhrrQ3U1U7 701 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gm9Q3UKW5 162 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 DhhQ61488 396 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gm13757Q7TR17 305 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Sectm1bQ9JL59 212 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Olfr218E9PWV2 313 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gm14408E9Q6B9 136 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Olfr898L7N1Z5 316 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Taar3Q5QD16 343 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Urm1Q9D2P4 101 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Eaf1Q9D4C5 268 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gm28305F6U473 122 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Cldn20G5E8X0 219 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Foxq1O70220 400 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Mbnl1Q9JKP5 341 aaKnown RBP10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gm26920S4R2A5 56 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Cd7P50283 210 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gfi1P70338 423 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Atf1P81269 269 aaKnown RBP10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Olfr1344Q7TQV3 321 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Sfxn4Q925N1 313 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Cst7O89098 144 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Atp4bP50992 294 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Dhrs7cQ8CHS7 311 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Rcc1lQ9CYF5 461 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Rab37Q9JKM7 223 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 JPT1P97825 154 aaKnown RBP10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Ankrd33bQ3U0L2 486 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Esp23A8R0V5 104 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Olfr746E9Q840 314 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 C3ar1O09047 477 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Klkb1P26262 638 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 VegfcP97953 415 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Tmem52bQ0VBF2 186 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Scrt2Q8BTH6 311 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Wdfy2Q8BUB4 400 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Wdr5bQ9D7H2 328 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Dlx1Q64317 255 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Olfr967Q7TRA6 310 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 C130079G13RikQ8BUY2 280 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Phf13Q8K2W6 296 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Vstm2aQ8R0A6 236 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 MetrnlQ8VE43 311 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Olfr1030Q8VFL5 318 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Adad2Q9D5P4 478 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Sfrp5Q9WU66 314 aa10.62□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gm9242J3QNY1 357 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gm20877J3QPZ4 227 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 Ascl4M0QW46 144 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 Cdk2ap1O35207 114 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 Olfr924Q7TRB8 308 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 Cldn14Q9Z0S3 239 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 Olfr1224-ps1A3KGY4 311 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gpr4Q8BUD0 365 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 Rbm14Q8C2Q3 669 aaKnown RBP10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 MrgprfQ8VCJ6 343 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 Olfr1009Q8VFK1 314 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 Slc25a37Q920G8 338 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 RetnlaQ9EP95 111 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 Tmprss2Q9JIQ8 490 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 Upk3aQ9JKX8 287 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 Olfr1329L7MTV4 313 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 Olfr194L7N1Y8 306 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 Bcl7cO08664 217 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 Rab24P35290 203 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 EcscrQ3TZW0 214 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 Dnd1Q6VY05 352 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 C1rbQ8CFG9 706 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 Olfr1079Q8VF52 315 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 Xrcc3Q9CXE6 349 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 Casp16-psI6L890 176 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 Rdh16O54909 317 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gsx2P31316 305 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 Guca2aP33680 116 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 Mef2aQ60929 498 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 RpeQ8VEE0 228 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 Tmem33Q9CR67 247 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gtf3c1Q8K284 2101 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 Marf1Q8BJ34 1730 aaKnown RBP10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 Smim18J3QNP2 93 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 Arg1Q61176 323 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gpr6Q6YNI2 363 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 Olfr843Q7TRG4 313 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 Olfr108Q8VFA1 320 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 Pycr3Q9DCC4 274 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 Ighv9-1A0A0B4J1P3 117 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 Zbtb34A2ATY4 518 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 Tspan12Q8BKT6 305 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 Rab32Q9CZE3 223 aa10.61□□□□□ -0.71
Trim56-201ENSMUST00000054384 Trav23A0A0G2JG17 115 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Pdcd6P12815 191 aaKnown RBP10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Npas1P97459 594 aa10.6□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 47.4 ms