RNA–Protein interactions for RNA: ENST00000641899.1

SRRM4-204, Transcript of serine/arginine repetitive matrix 4, humanhuman

Gene SRRM4, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-204ENST00000641899 SNAPC2Q13487 334 aa19.08■□□□□ 0.64
SRRM4-204ENST00000641899 UBE4AQ14139 1066 aa19.08■□□□□ 0.64
SRRM4-204ENST00000641899 ERO1BQ86YB8 467 aa19.08■□□□□ 0.64
SRRM4-204ENST00000641899 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.08■□□□□ 0.64
SRRM4-204ENST00000641899 IL16Q14005 1332 aa19.07■□□□□ 0.64
SRRM4-204ENST00000641899 RBBP6Q7Z6E9 1792 aaKnown RBP19.07■□□□□ 0.64
SRRM4-204ENST00000641899 FRAT2O75474 233 aaPredicted RBP19.07■□□□□ 0.64
SRRM4-204ENST00000641899 LACTBP83111 547 aaPredicted RBP19.07■□□□□ 0.64
SRRM4-204ENST00000641899 LMBR1LQ6UX01 489 aa19.07■□□□□ 0.64
SRRM4-204ENST00000641899 TDRD7Q8NHU6 1098 aaKnown RBP19.07■□□□□ 0.64
SRRM4-204ENST00000641899 TBC1D22AQ8WUA7 517 aa19.07■□□□□ 0.64
SRRM4-204ENST00000641899 ZNF646O15015 1829 aaPredicted RBP19.07■□□□□ 0.64
SRRM4-204ENST00000641899 SPEF2Q9C093 1822 aa19.07■□□□□ 0.64
SRRM4-204ENST00000641899 SPDYE5A6NIY4 337 aa19.06■□□□□ 0.64
SRRM4-204ENST00000641899 H0YGN5 161 aa19.06■□□□□ 0.64
SRRM4-204ENST00000641899 MYCP01106 439 aaPredicted RBP19.06■□□□□ 0.64
SRRM4-204ENST00000641899 CRKP46108 304 aa19.06■□□□□ 0.64
SRRM4-204ENST00000641899 FOXO4P98177 505 aa19.06■□□□□ 0.64
SRRM4-204ENST00000641899 HDLBPQ00341 1268 aaKnown RBP19.06■□□□□ 0.64
SRRM4-204ENST00000641899 FAM43AQ8N2R8 423 aa19.06■□□□□ 0.64
SRRM4-204ENST00000641899 DPF3Q92784 378 aa19.06■□□□□ 0.64
SRRM4-204ENST00000641899 HTATIP2Q9BUP3 242 aa19.06■□□□□ 0.64
SRRM4-204ENST00000641899 TMEM39BQ9GZU3 492 aa19.06■□□□□ 0.64
SRRM4-204ENST00000641899 DCAF15Q66K64 600 aa19.05■□□□□ 0.64
SRRM4-204ENST00000641899 TEPSINQ96N21 525 aa19.05■□□□□ 0.64
SRRM4-204ENST00000641899 HTTP42858 3142 aa19.05■□□□□ 0.64
SRRM4-204ENST00000641899 MKI67P46013 3256 aaKnown RBP19.05■□□□□ 0.64
SRRM4-204ENST00000641899 CAVIN4Q5BKX8 364 aa19.04■□□□□ 0.64
SRRM4-204ENST00000641899 WWC1Q8IX03 1113 aa19.04■□□□□ 0.64
SRRM4-204ENST00000641899 SH3TC2Q8TF17 1288 aa19.04■□□□□ 0.64
SRRM4-204ENST00000641899 TEKT1Q969V4 418 aa19.04■□□□□ 0.64
SRRM4-204ENST00000641899 WRNIP1Q96S55 665 aa19.04■□□□□ 0.64
SRRM4-204ENST00000641899 C9orf78Q9NZ63 289 aaPredicted RBP19.04■□□□□ 0.64
SRRM4-204ENST00000641899 MAST3O60307 1309 aa19.03■□□□□ 0.64
SRRM4-204ENST00000641899 GRM8O00222 908 aa19.03■□□□□ 0.64
SRRM4-204ENST00000641899 PPIL2Q13356 520 aa19.03■□□□□ 0.64
SRRM4-204ENST00000641899 RAET1EQ8TD07 263 aa19.03■□□□□ 0.64
SRRM4-204ENST00000641899 CNKSR2Q8WXI2 1034 aa19.03■□□□□ 0.64
SRRM4-204ENST00000641899 NR2E3Q9Y5X4 410 aa19.03■□□□□ 0.64
SRRM4-204ENST00000641899 LAMB1P07942 1786 aa19.03■□□□□ 0.64
SRRM4-204ENST00000641899 KIAA0100Q14667 2235 aaKnown RBP19.02■□□□□ 0.64
SRRM4-204ENST00000641899 AOX1Q06278 1338 aa19.02■□□□□ 0.64
SRRM4-204ENST00000641899 GYG1P46976 350 aa19.02■□□□□ 0.64
SRRM4-204ENST00000641899 NCBP3Q53F19 620 aaKnown RBP19.02■□□□□ 0.64
SRRM4-204ENST00000641899 CHRDL2Q6WN34 429 aa19.02■□□□□ 0.64
SRRM4-204ENST00000641899 FAM83AQ86UY5 434 aa19.02■□□□□ 0.64
SRRM4-204ENST00000641899 MROH5Q6ZUA9 1318 aa19.01■□□□□ 0.63
SRRM4-204ENST00000641899 BTBD19C9JJ37 291 aa19.01■□□□□ 0.63
SRRM4-204ENST00000641899 UBXN2AP68543 259 aa19.01■□□□□ 0.63
SRRM4-204ENST00000641899 CAP1Q01518 475 aa19.01■□□□□ 0.63
SRRM4-204ENST00000641899 BEND3Q5T5X7 828 aa19.01■□□□□ 0.63
SRRM4-204ENST00000641899 FKBP1CQ5VVH2 108 aa19.01■□□□□ 0.63
SRRM4-204ENST00000641899 ZNF594Q96JF6 807 aaPredicted RBP19.01■□□□□ 0.63
SRRM4-204ENST00000641899 FAM84BQ96KN1 310 aaPredicted RBP19.01■□□□□ 0.63
SRRM4-204ENST00000641899 TRIM47Q96LD4 638 aa19.01■□□□□ 0.63
SRRM4-204ENST00000641899 MRIQ9BWK5 157 aa19.01■□□□□ 0.63
SRRM4-204ENST00000641899 ECM29Q5VYK3 1845 aa19.01■□□□□ 0.63
SRRM4-204ENST00000641899 FMNL1O95466 1100 aaPredicted RBP19■□□□□ 0.63
SRRM4-204ENST00000641899 CAPN2P17655 700 aa19■□□□□ 0.63
SRRM4-204ENST00000641899 PPATQ06203 517 aa19■□□□□ 0.63
SRRM4-204ENST00000641899 ZNF341Q9BYN7 854 aa19■□□□□ 0.63
SRRM4-204ENST00000641899 BIN2Q9UBW5 565 aaPredicted RBP19■□□□□ 0.63
SRRM4-204ENST00000641899 SRRDQ9UH36 339 aa19■□□□□ 0.63
SRRM4-204ENST00000641899 SUGT1Q9Y2Z0 365 aa19■□□□□ 0.63
SRRM4-204ENST00000641899 SNCAIPQ9Y6H5 919 aa19■□□□□ 0.63
SRRM4-204ENST00000641899 CENPFP49454 3210 aa18.99■□□□□ 0.63
SRRM4-204ENST00000641899 IRF6O14896 467 aa18.99■□□□□ 0.63
SRRM4-204ENST00000641899 GRK4P32298 578 aa18.99■□□□□ 0.63
SRRM4-204ENST00000641899 PSMC4P43686 418 aa18.99■□□□□ 0.63
SRRM4-204ENST00000641899 CHAF1AQ13111 956 aaPredicted RBP18.99■□□□□ 0.63
SRRM4-204ENST00000641899 ARHGAP39Q9C0H5 1083 aa18.99■□□□□ 0.63
SRRM4-204ENST00000641899 ALDH1L1O75891 902 aa18.98■□□□□ 0.63
SRRM4-204ENST00000641899 ANKRD23Q86SG2 305 aa18.98■□□□□ 0.63
SRRM4-204ENST00000641899 CDAN1Q8IWY9 1227 aa18.98■□□□□ 0.63
SRRM4-204ENST00000641899 ZDHHC15Q96MV8 337 aa18.98■□□□□ 0.63
SRRM4-204ENST00000641899 F6X3S4 739 aa18.97■□□□□ 0.63
SRRM4-204ENST00000641899 GJB1P08034 283 aa18.97■□□□□ 0.63
SRRM4-204ENST00000641899 GJA8P48165 433 aa18.97■□□□□ 0.63
SRRM4-204ENST00000641899 C17orf99Q6UX52 265 aa18.97■□□□□ 0.63
SRRM4-204ENST00000641899 ZKSCAN4Q969J2 545 aaPredicted RBP18.97■□□□□ 0.63
SRRM4-204ENST00000641899 RIPOR2Q9Y4F9 1068 aa18.97■□□□□ 0.63
SRRM4-204ENST00000641899 BRCA2P51587 3418 aa18.97■□□□□ 0.63
SRRM4-204ENST00000641899 FANCIQ9NVI1 1328 aa18.97■□□□□ 0.63
SRRM4-204ENST00000641899 VAMP4O75379 141 aa18.96■□□□□ 0.63
SRRM4-204ENST00000641899 FCGRTP55899 365 aa18.96■□□□□ 0.63
SRRM4-204ENST00000641899 METTL24Q5JXM2 366 aa18.96■□□□□ 0.63
SRRM4-204ENST00000641899 FBXO33Q7Z6M2 555 aa18.96■□□□□ 0.63
SRRM4-204ENST00000641899 PARK7Q99497 189 aaKnown RBP18.96■□□□□ 0.63
SRRM4-204ENST00000641899 SRCIN1Q9C0H9 1055 aa18.96■□□□□ 0.63
SRRM4-204ENST00000641899 RNF208Q9H0X6 261 aa18.96■□□□□ 0.63
SRRM4-204ENST00000641899 CPA4Q9UI42 421 aa18.96■□□□□ 0.63
SRRM4-204ENST00000641899 MYPNQ86TC9 1320 aa18.96■□□□□ 0.63
SRRM4-204ENST00000641899 RPAP1Q9BWH6 1393 aaPredicted RBP18.95■□□□□ 0.62
SRRM4-204ENST00000641899 PDHXO00330 501 aa18.95■□□□□ 0.62
SRRM4-204ENST00000641899 EPHA10Q5JZY3 1008 aa18.95■□□□□ 0.62
SRRM4-204ENST00000641899 WDR63Q8IWG1 891 aa18.95■□□□□ 0.62
SRRM4-204ENST00000641899 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.95■□□□□ 0.62
SRRM4-204ENST00000641899 SLAIN1Q8ND83 568 aa18.95■□□□□ 0.62
SRRM4-204ENST00000641899 RBM27Q9P2N5 1060 aaKnown RBP18.95■□□□□ 0.62
SRRM4-204ENST00000641899 A0A1W2PPC1 479 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms