RNA–Protein interactions for RNA: ENST00000639888.1

SPIN3-230, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 4,299 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-230ENST00000639888 IRX1P78414 480 aaPredicted RBP12.57□□□□□ -0.4
SPIN3-230ENST00000639888 CCDC40Q4G0X9 1142 aa12.57□□□□□ -0.4
SPIN3-230ENST00000639888 ARMCX5Q6P1M9 558 aa12.57□□□□□ -0.4
SPIN3-230ENST00000639888 SLF1Q9BQI6 1058 aa12.57□□□□□ -0.4
SPIN3-230ENST00000639888 YIPF3Q9GZM5 350 aa12.57□□□□□ -0.4
SPIN3-230ENST00000639888 CD248Q9HCU0 757 aa12.57□□□□□ -0.4
SPIN3-230ENST00000639888 MYO5CQ9NQX4 1742 aa12.57□□□□□ -0.4
SPIN3-230ENST00000639888 A6NNZ2 444 aa12.57□□□□□ -0.4
SPIN3-230ENST00000639888 NMIQ13287 307 aaPredicted RBP12.57□□□□□ -0.4
SPIN3-230ENST00000639888 TUBB8Q3ZCM7 444 aa12.57□□□□□ -0.4
SPIN3-230ENST00000639888 LRRC31Q6UY01 552 aa12.57□□□□□ -0.4
SPIN3-230ENST00000639888 CHST3Q7LGC8 479 aa12.57□□□□□ -0.4
SPIN3-230ENST00000639888 SLC35F6Q8N357 371 aa12.57□□□□□ -0.4
SPIN3-230ENST00000639888 ANKS4BQ8N8V4 417 aa12.57□□□□□ -0.4
SPIN3-230ENST00000639888 NEXNQ0ZGT2 675 aa12.56□□□□□ -0.4
SPIN3-230ENST00000639888 SF3B2Q13435 895 aaKnown RBP12.56□□□□□ -0.4
SPIN3-230ENST00000639888 TRMT44Q8IYL2 757 aaKnown RBP12.56□□□□□ -0.4
SPIN3-230ENST00000639888 CEP120Q8N960 986 aa12.56□□□□□ -0.4
SPIN3-230ENST00000639888 CCDC47Q96A33 483 aaKnown RBP12.56□□□□□ -0.4
SPIN3-230ENST00000639888 MYO1FO00160 1098 aa12.56□□□□□ -0.4
SPIN3-230ENST00000639888 ZRSR2Q15696 482 aaKnown RBP12.56□□□□□ -0.4
SPIN3-230ENST00000639888 TRIM68Q6AZZ1 485 aa12.56□□□□□ -0.4
SPIN3-230ENST00000639888 PSMB7Q99436 277 aa12.56□□□□□ -0.4
SPIN3-230ENST00000639888 HGSO14964 777 aaPredicted RBP12.56□□□□□ -0.4
SPIN3-230ENST00000639888 PTH1RQ03431 593 aa12.56□□□□□ -0.4
SPIN3-230ENST00000639888 SCRN1Q12765 414 aa12.56□□□□□ -0.4
SPIN3-230ENST00000639888 PDCLQ13371 301 aa12.56□□□□□ -0.4
SPIN3-230ENST00000639888 TAF7Q15545 349 aaPredicted RBP12.56□□□□□ -0.4
SPIN3-230ENST00000639888 RIN2Q8WYP3 895 aaPredicted RBP12.56□□□□□ -0.4
SPIN3-230ENST00000639888 FUCA2Q9BTY2 467 aa12.56□□□□□ -0.4
SPIN3-230ENST00000639888 KCNG1Q9UIX4 513 aa12.56□□□□□ -0.4
SPIN3-230ENST00000639888 ABCC4O15439 1325 aa12.56□□□□□ -0.4
SPIN3-230ENST00000639888 POLR1AO95602 1720 aaPredicted RBP12.55□□□□□ -0.4
SPIN3-230ENST00000639888 SMIM24O75264 130 aa12.55□□□□□ -0.4
SPIN3-230ENST00000639888 AFMP43652 599 aa12.55□□□□□ -0.4
SPIN3-230ENST00000639888 WHAMMP3Q1A5X7 153 aa12.55□□□□□ -0.4
SPIN3-230ENST00000639888 NUTM2AQ8IVF1 878 aaPredicted RBP12.55□□□□□ -0.4
SPIN3-230ENST00000639888 TCP11Q8WWU5 503 aa12.55□□□□□ -0.4
SPIN3-230ENST00000639888 PGBD1Q96JS3 809 aa12.55□□□□□ -0.4
SPIN3-230ENST00000639888 SH3GL3Q99963 347 aa12.55□□□□□ -0.4
SPIN3-230ENST00000639888 OSBPL5Q9H0X9 879 aaPredicted RBP12.55□□□□□ -0.4
SPIN3-230ENST00000639888 TTF2Q9UNY4 1162 aaKnown RBP12.55□□□□□ -0.4
SPIN3-230ENST00000639888 PLEKHG2Q9H7P9 1386 aa12.55□□□□□ -0.4
SPIN3-230ENST00000639888 TRHP20396 242 aaPredicted RBP12.55□□□□□ -0.4
SPIN3-230ENST00000639888 PAX7P23759 505 aa12.55□□□□□ -0.4
SPIN3-230ENST00000639888 CCDC96Q2M329 555 aa12.55□□□□□ -0.4
SPIN3-230ENST00000639888 CCDC82Q8N4S0 544 aa12.55□□□□□ -0.4
SPIN3-230ENST00000639888 EHBP1Q8NDI1 1231 aa12.55□□□□□ -0.4
SPIN3-230ENST00000639888 TAF4BQ92750 862 aa12.55□□□□□ -0.4
SPIN3-230ENST00000639888 UBAC1Q9BSL1 405 aa12.55□□□□□ -0.4
SPIN3-230ENST00000639888 GOPCQ9HD26 462 aa12.55□□□□□ -0.4
SPIN3-230ENST00000639888 ATP7AQ04656 1500 aa12.55□□□□□ -0.4
SPIN3-230ENST00000639888 MACROD2A1Z1Q3 448 aa12.55□□□□□ -0.4
SPIN3-230ENST00000639888 KRT86O43790 486 aa12.55□□□□□ -0.4
SPIN3-230ENST00000639888 STX10O60499 249 aa12.55□□□□□ -0.4
SPIN3-230ENST00000639888 CCT6AP40227 531 aaKnown RBP12.55□□□□□ -0.4
SPIN3-230ENST00000639888 FBXO31Q5XUX0 539 aaPredicted RBP12.55□□□□□ -0.4
SPIN3-230ENST00000639888 NAA15Q9BXJ9 866 aaKnown RBP12.55□□□□□ -0.4
SPIN3-230ENST00000639888 IRX2Q9BZI1 471 aaPredicted RBP12.55□□□□□ -0.4
SPIN3-230ENST00000639888 NCOA5Q9HCD5 579 aaKnown RBP12.55□□□□□ -0.4
SPIN3-230ENST00000639888 GOLGA8BA8MQT2 603 aa12.54□□□□□ -0.4
SPIN3-230ENST00000639888 IDEP14735 1019 aa12.54□□□□□ -0.4
SPIN3-230ENST00000639888 G2E3Q7L622 706 aa12.54□□□□□ -0.4
SPIN3-230ENST00000639888 WAPLQ7Z5K2 1190 aa12.54□□□□□ -0.4
SPIN3-230ENST00000639888 SUGP1Q8IWZ8 645 aaKnown RBP12.54□□□□□ -0.4
SPIN3-230ENST00000639888 HMG20BQ9P0W2 317 aa12.54□□□□□ -0.4
SPIN3-230ENST00000639888 ENC1O14682 589 aa12.54□□□□□ -0.4
SPIN3-230ENST00000639888 RPS6KB1P23443 525 aa12.54□□□□□ -0.4
SPIN3-230ENST00000639888 CCDC178Q5BJE1 867 aa12.54□□□□□ -0.4
SPIN3-230ENST00000639888 LMOD2Q6P5Q4 547 aa12.54□□□□□ -0.4
SPIN3-230ENST00000639888 SPATS2Q86XZ4 545 aaKnown RBP12.54□□□□□ -0.4
SPIN3-230ENST00000639888 SKAP2O75563 359 aaPredicted RBP12.54□□□□□ -0.4
SPIN3-230ENST00000639888 NDUFA8P51970 172 aa12.54□□□□□ -0.4
SPIN3-230ENST00000639888 VSNL1P62760 191 aa12.54□□□□□ -0.4
SPIN3-230ENST00000639888 CNGA4Q8IV77 575 aa12.54□□□□□ -0.4
SPIN3-230ENST00000639888 KLC4Q9NSK0 619 aa12.54□□□□□ -0.4
SPIN3-230ENST00000639888 AKAP2Q9Y2D5 859 aa12.54□□□□□ -0.4
SPIN3-230ENST00000639888 EIF4E1BA6NMX2 242 aaKnown RBP12.54□□□□□ -0.4
SPIN3-230ENST00000639888 SLC27A2O14975 620 aa12.54□□□□□ -0.4
SPIN3-230ENST00000639888 PSEN1P49768 467 aa12.54□□□□□ -0.4
SPIN3-230ENST00000639888 IQCB1Q15051 598 aa12.54□□□□□ -0.4
SPIN3-230ENST00000639888 FAM43BQ6ZT52 329 aaPredicted RBP12.54□□□□□ -0.4
SPIN3-230ENST00000639888 TXNDC2Q86VQ3 553 aa12.54□□□□□ -0.4
SPIN3-230ENST00000639888 RNF217Q8TC41 542 aa12.54□□□□□ -0.4
SPIN3-230ENST00000639888 TPX2Q9ULW0 747 aaKnown RBP12.54□□□□□ -0.4
SPIN3-230ENST00000639888 ZNF330Q9Y3S2 320 aaPredicted RBP12.54□□□□□ -0.4
SPIN3-230ENST00000639888 U3KPZ7 1027 aaPredicted RBP12.54□□□□□ -0.4
SPIN3-230ENST00000639888 ERCC6L2Q5T890 1561 aa12.53□□□□□ -0.4
SPIN3-230ENST00000639888 CUTAO60888 179 aa12.53□□□□□ -0.4
SPIN3-230ENST00000639888 HOMEZQ8IX15 550 aa12.53□□□□□ -0.4
SPIN3-230ENST00000639888 CCDC170Q8IYT3 715 aa12.53□□□□□ -0.4
SPIN3-230ENST00000639888 FAM227BQ96M60 508 aa12.53□□□□□ -0.4
SPIN3-230ENST00000639888 CDC42BPBQ9Y5S2 1711 aa12.53□□□□□ -0.4
SPIN3-230ENST00000639888 ZRANB2O95218 330 aaKnown RBP eCLIP12.53□□□□□ -0.4
SPIN3-230ENST00000639888 HMGB1P09429 215 aaKnown RBP12.53□□□□□ -0.4
SPIN3-230ENST00000639888 GGCXP38435 758 aa12.53□□□□□ -0.4
SPIN3-230ENST00000639888 HIBCHQ6NVY1 386 aaPredicted RBP12.53□□□□□ -0.4
SPIN3-230ENST00000639888 FCHSD1Q86WN1 690 aa12.53□□□□□ -0.4
SPIN3-230ENST00000639888 CDC5LQ99459 802 aaKnown RBP12.53□□□□□ -0.4
SPIN3-230ENST00000639888 SAR1BQ9Y6B6 198 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms