RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 TM4SF4P48230 202 aa9.82□□□□□ -0.84
PNKP-229ENST00000637897 CACNB3P54284 484 aa9.82□□□□□ -0.84
PNKP-229ENST00000637897 CHAF1AQ13111 956 aaPredicted RBP9.82□□□□□ -0.84
PNKP-229ENST00000637897 MTX1Q13505 466 aa9.82□□□□□ -0.84
PNKP-229ENST00000637897 API5Q9BZZ5 524 aaKnown RBP9.82□□□□□ -0.84
PNKP-229ENST00000637897 COPRSQ9NQ92 184 aa9.82□□□□□ -0.84
PNKP-229ENST00000637897 SAGE1Q9NXZ1 904 aa9.82□□□□□ -0.84
PNKP-229ENST00000637897 SERPINA10Q9UK55 444 aa9.82□□□□□ -0.84
PNKP-229ENST00000637897 ANGEL1Q9UNK9 670 aaKnown RBP9.82□□□□□ -0.84
PNKP-229ENST00000637897 PNMA6EA0A0J9YXQ4 647 aa9.81□□□□□ -0.84
PNKP-229ENST00000637897 CA12O43570 354 aa9.81□□□□□ -0.84
PNKP-229ENST00000637897 CIAO1O76071 339 aa9.81□□□□□ -0.84
PNKP-229ENST00000637897 NEFLP07196 543 aa9.81□□□□□ -0.84
PNKP-229ENST00000637897 PHKA1P46020 1223 aa9.81□□□□□ -0.84
PNKP-229ENST00000637897 PUM3Q15397 648 aaKnown RBP9.81□□□□□ -0.84
PNKP-229ENST00000637897 SPRYD7Q5W111 196 aa9.81□□□□□ -0.84
PNKP-229ENST00000637897 ZNF384Q8TF68 577 aa9.81□□□□□ -0.84
PNKP-229ENST00000637897 CNKSR2Q8WXI2 1034 aa9.81□□□□□ -0.84
PNKP-229ENST00000637897 TMEM39BQ9GZU3 492 aa9.81□□□□□ -0.84
PNKP-229ENST00000637897 VEZTQ9HBM0 779 aa9.81□□□□□ -0.84
PNKP-229ENST00000637897 HTTP42858 3142 aa9.8□□□□□ -0.84
PNKP-229ENST00000637897 TBC1D8O95759 1140 aa9.8□□□□□ -0.84
PNKP-229ENST00000637897 PRDX5P30044 214 aa9.8□□□□□ -0.84
PNKP-229ENST00000637897 ATF7IPQ6VMQ6 1270 aa9.8□□□□□ -0.84
PNKP-229ENST00000637897 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.8□□□□□ -0.84
PNKP-229ENST00000637897 TMEM57Q8N5G2 664 aa9.8□□□□□ -0.84
PNKP-229ENST00000637897 LPIN2Q92539 896 aa9.8□□□□□ -0.84
PNKP-229ENST00000637897 CLUAP1Q96AJ1 413 aa9.8□□□□□ -0.84
PNKP-229ENST00000637897 PTPN18Q99952 460 aa9.8□□□□□ -0.84
PNKP-229ENST00000637897 BEGAINQ9BUH8 593 aa9.8□□□□□ -0.84
PNKP-229ENST00000637897 TCP10L2B9ZVM9 353 aa9.79□□□□□ -0.84
PNKP-229ENST00000637897 IGF2BP3O00425 579 aaKnown RBP eCLIP9.79□□□□□ -0.84
PNKP-229ENST00000637897 ZBTB22O15209 634 aa9.79□□□□□ -0.84
PNKP-229ENST00000637897 SLURP2P0DP57 97 aa9.79□□□□□ -0.84
PNKP-229ENST00000637897 RBM5P52756 815 aaKnown RBP eCLIP9.79□□□□□ -0.84
PNKP-229ENST00000637897 TIMM10P62072 90 aa9.79□□□□□ -0.84
PNKP-229ENST00000637897 HDLBPQ00341 1268 aaKnown RBP9.79□□□□□ -0.84
PNKP-229ENST00000637897 TTLL12Q14166 644 aaPredicted RBP9.79□□□□□ -0.84
PNKP-229ENST00000637897 DIXDC1Q155Q3 683 aa9.79□□□□□ -0.84
PNKP-229ENST00000637897 ZFPM1Q8IX07 1006 aa9.79□□□□□ -0.84
PNKP-229ENST00000637897 WNK4Q96J92 1243 aa9.79□□□□□ -0.84
PNKP-229ENST00000637897 ZDHHC15Q96MV8 337 aa9.79□□□□□ -0.84
PNKP-229ENST00000637897 MRIQ9BWK5 157 aa9.79□□□□□ -0.84
PNKP-229ENST00000637897 FBXO3Q9UK99 471 aa9.79□□□□□ -0.84
PNKP-229ENST00000637897 PPP2R3BQ9Y5P8 575 aa9.79□□□□□ -0.84
PNKP-229ENST00000637897 MYH13Q9UKX3 1938 aa9.78□□□□□ -0.84
PNKP-229ENST00000637897 IFIT1P09914 478 aaKnown RBP9.78□□□□□ -0.84
PNKP-229ENST00000637897 IL15P40933 162 aaPredicted RBP9.78□□□□□ -0.84
PNKP-229ENST00000637897 TFCP2Q12800 502 aa9.78□□□□□ -0.84
PNKP-229ENST00000637897 NFIAQ12857 509 aa9.78□□□□□ -0.84
PNKP-229ENST00000637897 DGKZQ13574 1117 aa9.78□□□□□ -0.84
PNKP-229ENST00000637897 ATP2B3Q16720 1220 aa9.78□□□□□ -0.84
PNKP-229ENST00000637897 CAVIN4Q5BKX8 364 aa9.78□□□□□ -0.84
PNKP-229ENST00000637897 CCDC102BQ68D86 513 aa9.78□□□□□ -0.84
PNKP-229ENST00000637897 ARMC9Q7Z3E5 817 aa9.78□□□□□ -0.84
PNKP-229ENST00000637897 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.78□□□□□ -0.84
PNKP-229ENST00000637897 ZNF296Q8WUU4 475 aaPredicted RBP9.78□□□□□ -0.84
PNKP-229ENST00000637897 MS4A4AQ96JQ5 239 aa9.78□□□□□ -0.84
PNKP-229ENST00000637897 CFHR5Q9BXR6 569 aa9.78□□□□□ -0.84
PNKP-229ENST00000637897 DAGLAQ9Y4D2 1042 aa9.78□□□□□ -0.84
PNKP-229ENST00000637897 RFX7Q2KHR2 1363 aa9.77□□□□□ -0.84
PNKP-229ENST00000637897 TESPA1A2RU30 521 aaPredicted RBP9.77□□□□□ -0.85
PNKP-229ENST00000637897 SRGAP3O43295 1099 aa9.77□□□□□ -0.85
PNKP-229ENST00000637897 SLC5A1P13866 664 aa9.77□□□□□ -0.85
PNKP-229ENST00000637897 RGS19P49795 217 aa9.77□□□□□ -0.85
PNKP-229ENST00000637897 RASGRF1Q13972 1273 aa9.77□□□□□ -0.85
PNKP-229ENST00000637897 POLA2Q14181 598 aa9.77□□□□□ -0.85
PNKP-229ENST00000637897 CDC42EP5Q6NZY7 148 aa9.77□□□□□ -0.85
PNKP-229ENST00000637897 HHIPL2Q6UWX4 724 aa9.77□□□□□ -0.85
PNKP-229ENST00000637897 PI16Q6UXB8 463 aa9.77□□□□□ -0.85
PNKP-229ENST00000637897 VPS37DQ86XT2 251 aa9.77□□□□□ -0.85
PNKP-229ENST00000637897 TBC1D22AQ8WUA7 517 aa9.77□□□□□ -0.85
PNKP-229ENST00000637897 FRAT1Q92837 279 aaPredicted RBP9.77□□□□□ -0.85
PNKP-229ENST00000637897 CEP126Q9P2H0 1117 aa9.77□□□□□ -0.85
PNKP-229ENST00000637897 FAM198AQ9UFP1 575 aa9.77□□□□□ -0.85
PNKP-229ENST00000637897 SUPT16HQ9Y5B9 1047 aaKnown RBP9.77□□□□□ -0.85
PNKP-229ENST00000637897 SALL1Q9NSC2 1324 aa9.77□□□□□ -0.85
PNKP-229ENST00000637897 ATRNL1Q5VV63 1379 aa9.76□□□□□ -0.85
PNKP-229ENST00000637897 BRCA2P51587 3418 aa9.76□□□□□ -0.85
PNKP-229ENST00000637897 A0A1B0GUL7 405 aa9.76□□□□□ -0.85
PNKP-229ENST00000637897 GPR25O00155 361 aa9.76□□□□□ -0.85
PNKP-229ENST00000637897 ZBTB7BO15156 539 aaPredicted RBP9.76□□□□□ -0.85
PNKP-229ENST00000637897 NF2P35240 595 aa9.76□□□□□ -0.85
PNKP-229ENST00000637897 SH3BP5LQ7L8J4 393 aa9.76□□□□□ -0.85
PNKP-229ENST00000637897 IFNL1Q8IU54 200 aa9.76□□□□□ -0.85
PNKP-229ENST00000637897 TEKT1Q969V4 418 aa9.76□□□□□ -0.85
PNKP-229ENST00000637897 XAGE2Q96GT9 111 aa9.76□□□□□ -0.85
PNKP-229ENST00000637897 C1orf115Q9H7X2 142 aa9.76□□□□□ -0.85
PNKP-229ENST00000637897 ELP3Q9H9T3 547 aa9.76□□□□□ -0.85
PNKP-229ENST00000637897 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.76□□□□□ -0.85
PNKP-229ENST00000637897 SUGT1Q9Y2Z0 365 aa9.76□□□□□ -0.85
PNKP-229ENST00000637897 SNCAIPQ9Y6H5 919 aa9.76□□□□□ -0.85
PNKP-229ENST00000637897 CENPFP49454 3210 aa9.75□□□□□ -0.85
PNKP-229ENST00000637897 MYO1BO43795 1136 aa9.75□□□□□ -0.85
PNKP-229ENST00000637897 PPP1R12BO60237 982 aaPredicted RBP9.75□□□□□ -0.85
PNKP-229ENST00000637897 GNAI3P08754 354 aa9.75□□□□□ -0.85
PNKP-229ENST00000637897 ZBTB48P10074 688 aaPredicted RBP9.75□□□□□ -0.85
PNKP-229ENST00000637897 VGLL4Q14135 290 aa9.75□□□□□ -0.85
PNKP-229ENST00000637897 SUPT20HL1Q3ZLR7 823 aa9.75□□□□□ -0.85
PNKP-229ENST00000637897 NOM1Q5C9Z4 860 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms