RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 PLEKHG2Q9H7P9 1386 aa11.34□□□□□ -0.59
CACNA1A-248ENST00000637774 CCDC183Q5T5S1 534 aa11.33□□□□□ -0.6
CACNA1A-248ENST00000637774 KCNB2Q92953 911 aa11.33□□□□□ -0.6
CACNA1A-248ENST00000637774 UBAC1Q9BSL1 405 aa11.33□□□□□ -0.6
CACNA1A-248ENST00000637774 NYXQ9GZU5 481 aa11.33□□□□□ -0.6
CACNA1A-248ENST00000637774 MINPP1Q9UNW1 487 aa11.33□□□□□ -0.6
CACNA1A-248ENST00000637774 SLC12A7Q9Y666 1083 aa11.33□□□□□ -0.6
CACNA1A-248ENST00000637774 CYP2D7A0A087X1C5 515 aa11.33□□□□□ -0.6
CACNA1A-248ENST00000637774 GOLGA8AA7E2F4 631 aa11.33□□□□□ -0.6
CACNA1A-248ENST00000637774 G3V3G9 751 aa11.33□□□□□ -0.6
CACNA1A-248ENST00000637774 RPS6KA4O75676 772 aa11.33□□□□□ -0.6
CACNA1A-248ENST00000637774 KLRK1P26718 216 aa11.33□□□□□ -0.6
CACNA1A-248ENST00000637774 DYNLL1P63167 89 aaKnown RBP11.33□□□□□ -0.6
CACNA1A-248ENST00000637774 TRIM29Q14134 588 aa11.33□□□□□ -0.6
CACNA1A-248ENST00000637774 SART3Q15020 963 aaKnown RBP11.33□□□□□ -0.6
CACNA1A-248ENST00000637774 STK38Q15208 465 aa11.33□□□□□ -0.6
CACNA1A-248ENST00000637774 DCAF8Q5TAQ9 597 aa11.33□□□□□ -0.6
CACNA1A-248ENST00000637774 TBC1D10CQ8IV04 446 aa11.33□□□□□ -0.6
CACNA1A-248ENST00000637774 NSUN7Q8NE18 718 aaKnown RBP11.33□□□□□ -0.6
CACNA1A-248ENST00000637774 SCAND2PQ9GZW5 306 aaPredicted RBP11.33□□□□□ -0.6
CACNA1A-248ENST00000637774 TNMDQ9H2S6 317 aa11.33□□□□□ -0.6
CACNA1A-248ENST00000637774 AATFQ9NY61 560 aaKnown RBP eCLIP11.33□□□□□ -0.6
CACNA1A-248ENST00000637774 ISY1Q9ULR0 285 aaKnown RBP11.33□□□□□ -0.6
CACNA1A-248ENST00000637774 MAGEB6P1A0A0J9YX57 407 aa11.33□□□□□ -0.6
CACNA1A-248ENST00000637774 UBE3CQ15386 1083 aa11.33□□□□□ -0.6
CACNA1A-248ENST00000637774 CLEC4GQ6UXB4 293 aa11.33□□□□□ -0.6
CACNA1A-248ENST00000637774 DZIP1Q86YF9 867 aaKnown RBP11.33□□□□□ -0.6
CACNA1A-248ENST00000637774 VGLL2Q8N8G2 317 aa11.33□□□□□ -0.6
CACNA1A-248ENST00000637774 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.33□□□□□ -0.6
CACNA1A-248ENST00000637774 ABCC6O95255 1503 aa11.32□□□□□ -0.6
CACNA1A-248ENST00000637774 C6orf229H3BNL8 230 aa11.32□□□□□ -0.6
CACNA1A-248ENST00000637774 PFKFB2O60825 505 aa11.32□□□□□ -0.6
CACNA1A-248ENST00000637774 TSGA10IPQ3SY00 556 aa11.32□□□□□ -0.6
CACNA1A-248ENST00000637774 AIFM3Q96NN9 605 aa11.32□□□□□ -0.6
CACNA1A-248ENST00000637774 NAP1L5Q96NT1 182 aaPredicted RBP11.32□□□□□ -0.6
CACNA1A-248ENST00000637774 STRBPQ96SI9 672 aaKnown RBP11.32□□□□□ -0.6
CACNA1A-248ENST00000637774 NUP62CLQ9H1M0 184 aa11.32□□□□□ -0.6
CACNA1A-248ENST00000637774 USP25Q9UHP3 1055 aa11.32□□□□□ -0.6
CACNA1A-248ENST00000637774 NARFQ9UHQ1 456 aa11.32□□□□□ -0.6
CACNA1A-248ENST00000637774 LIG1P18858 919 aa11.32□□□□□ -0.6
CACNA1A-248ENST00000637774 HIBADHP31937 336 aaKnown RBP11.32□□□□□ -0.6
CACNA1A-248ENST00000637774 DRC7Q8IY82 874 aa11.32□□□□□ -0.6
CACNA1A-248ENST00000637774 SLC26A6Q9BXS9 759 aa11.32□□□□□ -0.6
CACNA1A-248ENST00000637774 ZBTB43O43298 467 aa11.31□□□□□ -0.6
CACNA1A-248ENST00000637774 ZNF445P59923 1031 aa11.31□□□□□ -0.6
CACNA1A-248ENST00000637774 AKAP17AQ02040 695 aaKnown RBP11.31□□□□□ -0.6
CACNA1A-248ENST00000637774 CCDC73Q6ZRK6 1079 aa11.31□□□□□ -0.6
CACNA1A-248ENST00000637774 SLC51AQ86UW1 340 aa11.31□□□□□ -0.6
CACNA1A-248ENST00000637774 AMIGO3Q86WK7 504 aa11.31□□□□□ -0.6
CACNA1A-248ENST00000637774 SDF4Q9BRK5 362 aa11.31□□□□□ -0.6
CACNA1A-248ENST00000637774 CFAP45Q9UL16 551 aa11.31□□□□□ -0.6
CACNA1A-248ENST00000637774 ANGEL1Q9UNK9 670 aaKnown RBP11.31□□□□□ -0.6
CACNA1A-248ENST00000637774 PKD1L3Q7Z443 1732 aa11.31□□□□□ -0.6
CACNA1A-248ENST00000637774 SIPA1L3O60292 1781 aaPredicted RBP11.31□□□□□ -0.6
CACNA1A-248ENST00000637774 hCG_1642624A0A1W2PR95 340 aa11.31□□□□□ -0.6
CACNA1A-248ENST00000637774 PATL2C9JE40 543 aaKnown RBP11.31□□□□□ -0.6
CACNA1A-248ENST00000637774 ERCC4Q92889 916 aaPredicted RBP11.31□□□□□ -0.6
CACNA1A-248ENST00000637774 SENP2Q9HC62 589 aa11.31□□□□□ -0.6
CACNA1A-248ENST00000637774 CYB5R4Q7L1T6 521 aa11.31□□□□□ -0.6
CACNA1A-248ENST00000637774 LEO1Q8WVC0 666 aaPredicted RBP11.31□□□□□ -0.6
CACNA1A-248ENST00000637774 TRPC5Q9UL62 973 aaPredicted RBP11.31□□□□□ -0.6
CACNA1A-248ENST00000637774 F8W031 263 aaPredicted RBP11.3□□□□□ -0.6
CACNA1A-248ENST00000637774 ALG1Q9BT22 464 aa11.3□□□□□ -0.6
CACNA1A-248ENST00000637774 ARFGEF2Q9Y6D5 1785 aa11.3□□□□□ -0.6
CACNA1A-248ENST00000637774 RIC1Q4ADV7 1423 aa11.3□□□□□ -0.6
CACNA1A-248ENST00000637774 SMIM22K7EJ46 135 aa11.3□□□□□ -0.6
CACNA1A-248ENST00000637774 IARSP41252 1262 aaKnown RBP11.3□□□□□ -0.6
CACNA1A-248ENST00000637774 EXOSC10Q01780 885 aaKnown RBP11.3□□□□□ -0.6
CACNA1A-248ENST00000637774 CCDC173Q0VFZ6 552 aa11.3□□□□□ -0.6
CACNA1A-248ENST00000637774 SASS6Q6UVJ0 657 aa11.3□□□□□ -0.6
CACNA1A-248ENST00000637774 SPC24Q8NBT2 197 aa11.3□□□□□ -0.6
CACNA1A-248ENST00000637774 GOLGB1Q14789 3259 aaKnown RBP11.3□□□□□ -0.6
CACNA1A-248ENST00000637774 RIMBP2O15034 1052 aa11.3□□□□□ -0.6
CACNA1A-248ENST00000637774 FGFR2P21802 821 aa11.3□□□□□ -0.6
CACNA1A-248ENST00000637774 ARID4AP29374 1257 aaPredicted RBP11.3□□□□□ -0.6
CACNA1A-248ENST00000637774 MARCKSP29966 332 aaPredicted RBP11.3□□□□□ -0.6
CACNA1A-248ENST00000637774 PRDX5P30044 214 aa11.3□□□□□ -0.6
CACNA1A-248ENST00000637774 USP5P45974 858 aa11.3□□□□□ -0.6
CACNA1A-248ENST00000637774 WTAPQ15007 396 aa11.3□□□□□ -0.6
CACNA1A-248ENST00000637774 DNTTIP2Q5QJE6 756 aaKnown RBP11.3□□□□□ -0.6
CACNA1A-248ENST00000637774 ZNF396Q96N95 335 aaPredicted RBP11.3□□□□□ -0.6
CACNA1A-248ENST00000637774 RRAGDQ9NQL2 400 aaPredicted RBP11.3□□□□□ -0.6
CACNA1A-248ENST00000637774 BSDC1Q9NW68 430 aaPredicted RBP11.3□□□□□ -0.6
CACNA1A-248ENST00000637774 ZSWIM5Q9P217 1185 aa11.3□□□□□ -0.6
CACNA1A-248ENST00000637774 ESPNB1AK53 854 aa11.29□□□□□ -0.6
CACNA1A-248ENST00000637774 NFIXQ14938 502 aa11.29□□□□□ -0.6
CACNA1A-248ENST00000637774 MAP3K11Q16584 847 aa11.29□□□□□ -0.6
CACNA1A-248ENST00000637774 CERKQ8TCT0 537 aa11.29□□□□□ -0.6
CACNA1A-248ENST00000637774 FAM84BQ96KN1 310 aaPredicted RBP11.29□□□□□ -0.6
CACNA1A-248ENST00000637774 USP28Q96RU2 1077 aa11.29□□□□□ -0.6
CACNA1A-248ENST00000637774 NOL10Q9BSC4 688 aaKnown RBP11.29□□□□□ -0.6
CACNA1A-248ENST00000637774 NEDD4P46934 1319 aa11.29□□□□□ -0.6
CACNA1A-248ENST00000637774 KINO60870 393 aaKnown RBP11.29□□□□□ -0.6
CACNA1A-248ENST00000637774 CTDNEP1O95476 244 aa11.29□□□□□ -0.6
CACNA1A-248ENST00000637774 MSL1Q68DK7 614 aa11.29□□□□□ -0.6
CACNA1A-248ENST00000637774 BCL2L12Q9HB09 334 aa11.29□□□□□ -0.6
CACNA1A-248ENST00000637774 A0A087WWV3 80 aa11.28□□□□□ -0.6
CACNA1A-248ENST00000637774 USP17L12C9JPN9 530 aa11.28□□□□□ -0.6
CACNA1A-248ENST00000637774 USP17L21D6R901 530 aa11.28□□□□□ -0.6
CACNA1A-248ENST00000637774 RAD21O60216 631 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms