RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 TMEM88BA6NKF7 163 aa10.04□□□□□ -0.8
PNKP-226ENST00000636840 CRKP46108 304 aa10.04□□□□□ -0.8
PNKP-226ENST00000636840 TNNI2P48788 182 aa10.04□□□□□ -0.8
PNKP-226ENST00000636840 TNFAIP1Q13829 316 aa10.04□□□□□ -0.8
PNKP-226ENST00000636840 RASGRF1Q13972 1273 aa10.04□□□□□ -0.8
PNKP-226ENST00000636840 NBPF9Q3BBW0 867 aa10.04□□□□□ -0.8
PNKP-226ENST00000636840 ANGEL2Q5VTE6 544 aaKnown RBP10.04□□□□□ -0.8
PNKP-226ENST00000636840 HHIPL2Q6UWX4 724 aa10.04□□□□□ -0.8
PNKP-226ENST00000636840 DZIP1Q86YF9 867 aaKnown RBP10.04□□□□□ -0.8
PNKP-226ENST00000636840 EXOC6Q8TAG9 804 aa10.04□□□□□ -0.8
PNKP-226ENST00000636840 NOL10Q9BSC4 688 aaKnown RBP10.04□□□□□ -0.8
PNKP-226ENST00000636840 GGA3Q9NZ52 723 aa10.04□□□□□ -0.8
PNKP-226ENST00000636840 RAI14Q9P0K7 980 aa10.04□□□□□ -0.8
PNKP-226ENST00000636840 HMG20BQ9P0W2 317 aa10.04□□□□□ -0.8
PNKP-226ENST00000636840 SPDYE2BA6NHP3 402 aa10.03□□□□□ -0.8
PNKP-226ENST00000636840 EGFRP00533 1210 aa10.03□□□□□ -0.8
PNKP-226ENST00000636840 SPDYE6P0CI01 402 aa10.03□□□□□ -0.8
PNKP-226ENST00000636840 HDAC1Q13547 482 aaPredicted RBP10.03□□□□□ -0.8
PNKP-226ENST00000636840 TTF1Q15361 905 aaPredicted RBP10.03□□□□□ -0.8
PNKP-226ENST00000636840 C2orf69Q8N8R5 385 aa10.03□□□□□ -0.8
PNKP-226ENST00000636840 PRMT6Q96LA8 375 aaPredicted RBP10.03□□□□□ -0.8
PNKP-226ENST00000636840 GLIS2Q9BZE0 524 aaPredicted RBP10.03□□□□□ -0.8
PNKP-226ENST00000636840 DBNLQ9UJU6 430 aaKnown RBP10.03□□□□□ -0.8
PNKP-226ENST00000636840 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.03□□□□□ -0.8
PNKP-226ENST00000636840 CELF2O95319 508 aaKnown RBP10.02□□□□□ -0.81
PNKP-226ENST00000636840 MCAMP43121 646 aa10.02□□□□□ -0.81
PNKP-226ENST00000636840 SUPT20HL1Q3ZLR7 823 aa10.02□□□□□ -0.81
PNKP-226ENST00000636840 ANKRD45Q5TZF3 282 aa10.02□□□□□ -0.81
PNKP-226ENST00000636840 TMED8Q6PL24 325 aaPredicted RBP10.02□□□□□ -0.81
PNKP-226ENST00000636840 ZDHHC15Q96MV8 337 aa10.02□□□□□ -0.81
PNKP-226ENST00000636840 ZNF408Q9H9D4 720 aa10.02□□□□□ -0.81
PNKP-226ENST00000636840 VEZTQ9HBM0 779 aa10.02□□□□□ -0.81
PNKP-226ENST00000636840 SNRKQ9NRH2 765 aa10.02□□□□□ -0.81
PNKP-226ENST00000636840 CREBZFQ9NS37 354 aa10.02□□□□□ -0.81
PNKP-226ENST00000636840 PPP2R3BQ9Y5P8 575 aa10.02□□□□□ -0.81
PNKP-226ENST00000636840 PSME4Q14997 1843 aa10.02□□□□□ -0.81
PNKP-226ENST00000636840 PASKQ96RG2 1323 aa10.02□□□□□ -0.81
PNKP-226ENST00000636840 A0A1B0GUL6 1792 aa10.01□□□□□ -0.81
PNKP-226ENST00000636840 BAG3O95817 575 aa10.01□□□□□ -0.81
PNKP-226ENST00000636840 MAP4K4O95819 1239 aaPredicted RBP10.01□□□□□ -0.81
PNKP-226ENST00000636840 NEFLP07196 543 aa10.01□□□□□ -0.81
PNKP-226ENST00000636840 PRDX5P30044 214 aa10.01□□□□□ -0.81
PNKP-226ENST00000636840 MAP3K12Q12852 859 aa10.01□□□□□ -0.81
PNKP-226ENST00000636840 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.01□□□□□ -0.81
PNKP-226ENST00000636840 HOOK2Q96ED9 719 aa10.01□□□□□ -0.81
PNKP-226ENST00000636840 FAM163AQ96GL9 167 aaPredicted RBP10.01□□□□□ -0.81
PNKP-226ENST00000636840 ZBED3Q96IU2 234 aaPredicted RBP10.01□□□□□ -0.81
PNKP-226ENST00000636840 TDRD3Q9H7E2 651 aaKnown RBP10.01□□□□□ -0.81
PNKP-226ENST00000636840 ZNF70Q9UC06 446 aaPredicted RBP10.01□□□□□ -0.81
PNKP-226ENST00000636840 ABT1Q9ULW3 272 aaKnown RBP10.01□□□□□ -0.81
PNKP-226ENST00000636840 CLRN2A0PK11 232 aa10□□□□□ -0.81
PNKP-226ENST00000636840 TRAF5O00463 557 aa10□□□□□ -0.81
PNKP-226ENST00000636840 ERC2O15083 957 aa10□□□□□ -0.81
PNKP-226ENST00000636840 PPP1R12BO60237 982 aaPredicted RBP10□□□□□ -0.81
PNKP-226ENST00000636840 SMARCA5O60264 1052 aaPredicted RBP10□□□□□ -0.81
PNKP-226ENST00000636840 ATP5JP18859 108 aa10□□□□□ -0.81
PNKP-226ENST00000636840 ZAP70P43403 619 aa10□□□□□ -0.81
PNKP-226ENST00000636840 IRX6P78412 446 aaPredicted RBP10□□□□□ -0.81
PNKP-226ENST00000636840 TTLL12Q14166 644 aaPredicted RBP10□□□□□ -0.81
PNKP-226ENST00000636840 GRIK5Q16478 980 aa10□□□□□ -0.81
PNKP-226ENST00000636840 DEFB115Q30KQ5 88 aa10□□□□□ -0.81
PNKP-226ENST00000636840 FKBP1CQ5VVH2 108 aa10□□□□□ -0.81
PNKP-226ENST00000636840 NAA16Q6N069 864 aaPredicted RBP10□□□□□ -0.81
PNKP-226ENST00000636840 TBC1D9Q6ZT07 1266 aa10□□□□□ -0.81
PNKP-226ENST00000636840 DEFB129Q9H1M3 183 aa10□□□□□ -0.81
PNKP-226ENST00000636840 ECHDC1Q9NTX5 307 aa10□□□□□ -0.81
PNKP-226ENST00000636840 USP40Q9NVE5 1235 aa10□□□□□ -0.81
PNKP-226ENST00000636840 TLR7Q9NYK1 1049 aaKnown RBP10□□□□□ -0.81
PNKP-226ENST00000636840 POLR2AP24928 1970 aaKnown RBP9.99□□□□□ -0.81
PNKP-226ENST00000636840 ADM5C9JUS6 153 aa9.99□□□□□ -0.81
PNKP-226ENST00000636840 IDH1O75874 414 aaKnown RBP9.99□□□□□ -0.81
PNKP-226ENST00000636840 CYP2E1P05181 493 aaPredicted RBP9.99□□□□□ -0.81
PNKP-226ENST00000636840 PLCG2P16885 1265 aa9.99□□□□□ -0.81
PNKP-226ENST00000636840 FKBP1BP68106 108 aa9.99□□□□□ -0.81
PNKP-226ENST00000636840 MECOMQ03112 1051 aa9.99□□□□□ -0.81
PNKP-226ENST00000636840 LRRFIP1Q32MZ4 808 aaKnown RBP9.99□□□□□ -0.81
PNKP-226ENST00000636840 SPDYE2Q495Y8 402 aa9.99□□□□□ -0.81
PNKP-226ENST00000636840 ZSCAN25Q6NSZ9 544 aa9.99□□□□□ -0.81
PNKP-226ENST00000636840 APOBEC3HQ6NTF7 200 aaKnown RBP9.99□□□□□ -0.81
PNKP-226ENST00000636840 PI16Q6UXB8 463 aa9.99□□□□□ -0.81
PNKP-226ENST00000636840 ARMC9Q7Z3E5 817 aa9.99□□□□□ -0.81
PNKP-226ENST00000636840 CERS3Q8IU89 383 aa9.99□□□□□ -0.81
PNKP-226ENST00000636840 CDCA5Q96FF9 252 aa9.99□□□□□ -0.81
PNKP-226ENST00000636840 DNAJC2Q99543 621 aaKnown RBP9.99□□□□□ -0.81
PNKP-226ENST00000636840 BOLA2Q9H3K6 86 aa9.99□□□□□ -0.81
PNKP-226ENST00000636840 GBA2Q9HCG7 927 aaPredicted RBP9.99□□□□□ -0.81
PNKP-226ENST00000636840 ASTN2O75129 1339 aaPredicted RBP9.99□□□□□ -0.81
PNKP-226ENST00000636840 TCP10L2B9ZVM9 353 aa9.98□□□□□ -0.81
PNKP-226ENST00000636840 ECE1P42892 770 aa9.98□□□□□ -0.81
PNKP-226ENST00000636840 RASA3Q14644 834 aa9.98□□□□□ -0.81
PNKP-226ENST00000636840 DIXDC1Q155Q3 683 aa9.98□□□□□ -0.81
PNKP-226ENST00000636840 CST9Q5W186 159 aa9.98□□□□□ -0.81
PNKP-226ENST00000636840 PAXIP1Q6ZW49 1069 aaPredicted RBP9.98□□□□□ -0.81
PNKP-226ENST00000636840 FAM83AQ86UY5 434 aa9.98□□□□□ -0.81
PNKP-226ENST00000636840 NSUN4Q96CB9 384 aaKnown RBP9.98□□□□□ -0.81
PNKP-226ENST00000636840 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.98□□□□□ -0.81
PNKP-226ENST00000636840 DAGLAQ9Y4D2 1042 aa9.98□□□□□ -0.81
PNKP-226ENST00000636840 PCDHAC2Q9Y5I4 1007 aa9.98□□□□□ -0.81
PNKP-226ENST00000636840 GPR75-ASB3A0A0A6YYF3 556 aa9.97□□□□□ -0.81
PNKP-226ENST00000636840 GOLIM4O00461 696 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms