RNA–Protein interactions for RNA: ENST00000635966.1

LINC00598-209, long intergenic non-protein coding RNA 598, humanhuman

TSL 5 BASIC

Gene LINC00598, Length 1,148 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-209ENST00000635966 HRH3Q9Y5N1 445 aa8.66□□□□□ -1.02
LINC00598-209ENST00000635966 MAFBQ9Y5Q3 323 aaPredicted RBP8.66□□□□□ -1.02
LINC00598-209ENST00000635966 PCNTO95613 3336 aa8.66□□□□□ -1.02
LINC00598-209ENST00000635966 FAM208AQ9UK61 1670 aaKnown RBP8.65□□□□□ -1.02
LINC00598-209ENST00000635966 TMEM229AB2RXF0 380 aa8.65□□□□□ -1.02
LINC00598-209ENST00000635966 H7C1W4 665 aa8.65□□□□□ -1.02
LINC00598-209ENST00000635966 APAF1O14727 1248 aa8.65□□□□□ -1.02
LINC00598-209ENST00000635966 VSIG8P0DPA2 414 aa8.65□□□□□ -1.02
LINC00598-209ENST00000635966 LMOD1P29536 600 aaPredicted RBP8.65□□□□□ -1.02
LINC00598-209ENST00000635966 AMPHP49418 695 aa8.65□□□□□ -1.02
LINC00598-209ENST00000635966 OGFOD1Q8N543 542 aa8.65□□□□□ -1.02
LINC00598-209ENST00000635966 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.65□□□□□ -1.02
LINC00598-209ENST00000635966 TPCN2Q8NHX9 752 aa8.65□□□□□ -1.02
LINC00598-209ENST00000635966 KDRP35968 1356 aa8.64□□□□□ -1.03
LINC00598-209ENST00000635966 IGSF1Q8N6C5 1336 aa8.64□□□□□ -1.03
LINC00598-209ENST00000635966 RASA1P20936 1047 aa8.64□□□□□ -1.03
LINC00598-209ENST00000635966 INSM1Q01101 510 aaPredicted RBP8.64□□□□□ -1.03
LINC00598-209ENST00000635966 CCDC102BQ68D86 513 aa8.64□□□□□ -1.03
LINC00598-209ENST00000635966 FOXR1Q6PIV2 292 aa8.64□□□□□ -1.03
LINC00598-209ENST00000635966 CCDC146Q8IYE0 955 aa8.64□□□□□ -1.03
LINC00598-209ENST00000635966 A0A1B0GTH6 734 aa8.63□□□□□ -1.03
LINC00598-209ENST00000635966 A6NJY4 79 aa8.63□□□□□ -1.03
LINC00598-209ENST00000635966 WIPF1O43516 503 aa8.63□□□□□ -1.03
LINC00598-209ENST00000635966 NEFMP07197 916 aa8.63□□□□□ -1.03
LINC00598-209ENST00000635966 TMPOP42166 694 aaKnown RBP8.63□□□□□ -1.03
LINC00598-209ENST00000635966 C4orf17Q53FE4 359 aa8.63□□□□□ -1.03
LINC00598-209ENST00000635966 WDR63Q8IWG1 891 aa8.63□□□□□ -1.03
LINC00598-209ENST00000635966 TRMT2AQ8IZ69 625 aaKnown RBP8.63□□□□□ -1.03
LINC00598-209ENST00000635966 LARGE2Q8N3Y3 721 aa8.63□□□□□ -1.03
LINC00598-209ENST00000635966 NANOS1Q8WY41 292 aaKnown RBP8.63□□□□□ -1.03
LINC00598-209ENST00000635966 LTV1Q96GA3 475 aaPredicted RBP8.63□□□□□ -1.03
LINC00598-209ENST00000635966 ZNF594Q96JF6 807 aaPredicted RBP8.63□□□□□ -1.03
LINC00598-209ENST00000635966 SLC4A9Q96Q91 983 aa8.63□□□□□ -1.03
LINC00598-209ENST00000635966 NIFKQ9BYG3 293 aaKnown RBP8.63□□□□□ -1.03
LINC00598-209ENST00000635966 ZNF358Q9NW07 568 aa8.63□□□□□ -1.03
LINC00598-209ENST00000635966 MAPK8IP3Q9UPT6 1336 aa8.62□□□□□ -1.03
LINC00598-209ENST00000635966 F11P03951 625 aa8.62□□□□□ -1.03
LINC00598-209ENST00000635966 PLA2G4AP47712 749 aa8.62□□□□□ -1.03
LINC00598-209ENST00000635966 CLDN10P78369 228 aa8.62□□□□□ -1.03
LINC00598-209ENST00000635966 LCE2CQ5TA81 110 aa8.62□□□□□ -1.03
LINC00598-209ENST00000635966 MSL1Q68DK7 614 aa8.62□□□□□ -1.03
LINC00598-209ENST00000635966 PGBD3Q8N328 593 aa8.62□□□□□ -1.03
LINC00598-209ENST00000635966 AIDAQ96BJ3 306 aa8.62□□□□□ -1.03
LINC00598-209ENST00000635966 GMCL1Q96IK5 515 aa8.62□□□□□ -1.03
LINC00598-209ENST00000635966 VRTNQ9H8Y1 702 aa8.62□□□□□ -1.03
LINC00598-209ENST00000635966 GPAMQ9HCL2 828 aa8.62□□□□□ -1.03
LINC00598-209ENST00000635966 DOT1LQ8TEK3 1739 aa8.62□□□□□ -1.03
LINC00598-209ENST00000635966 NCAPD2Q15021 1401 aa8.62□□□□□ -1.03
LINC00598-209ENST00000635966 PLEKHG2Q9H7P9 1386 aa8.61□□□□□ -1.03
LINC00598-209ENST00000635966 MEGF6O75095 1541 aa8.61□□□□□ -1.03
LINC00598-209ENST00000635966 CDK2AP1O14519 115 aa8.61□□□□□ -1.03
LINC00598-209ENST00000635966 PRKAR2BP31323 418 aa8.61□□□□□ -1.03
LINC00598-209ENST00000635966 NFE2L2Q16236 605 aa8.61□□□□□ -1.03
LINC00598-209ENST00000635966 SULT6B1Q6IMI4 303 aa8.61□□□□□ -1.03
LINC00598-209ENST00000635966 TRIM22Q8IYM9 498 aa8.61□□□□□ -1.03
LINC00598-209ENST00000635966 RAPGEF4Q8WZA2 1011 aa8.61□□□□□ -1.03
LINC00598-209ENST00000635966 SMARCC1Q92922 1105 aaPredicted RBP8.61□□□□□ -1.03
LINC00598-209ENST00000635966 IL16Q14005 1332 aa8.6□□□□□ -1.03
LINC00598-209ENST00000635966 E9PSI1 815 aa8.6□□□□□ -1.03
LINC00598-209ENST00000635966 ZBTB7BO15156 539 aaPredicted RBP8.6□□□□□ -1.03
LINC00598-209ENST00000635966 HMOX1P09601 288 aa8.6□□□□□ -1.03
LINC00598-209ENST00000635966 SLFN5Q08AF3 891 aa8.6□□□□□ -1.03
LINC00598-209ENST00000635966 NBPF6Q5VWK0 638 aa8.6□□□□□ -1.03
LINC00598-209ENST00000635966 DNAJC5GQ8N7S2 189 aa8.6□□□□□ -1.03
LINC00598-209ENST00000635966 ZNF526Q8TF50 670 aaPredicted RBP8.6□□□□□ -1.03
LINC00598-209ENST00000635966 NBPF4Q96M43 638 aa8.6□□□□□ -1.03
LINC00598-209ENST00000635966 KIAA1024Q9UPX6 916 aa8.6□□□□□ -1.03
LINC00598-209ENST00000635966 PALLDQ8WX93 1383 aa8.6□□□□□ -1.03
LINC00598-209ENST00000635966 PCDH11XQ9BZA7 1347 aa8.59□□□□□ -1.03
LINC00598-209ENST00000635966 PCDH11YQ9BZA8 1340 aa8.59□□□□□ -1.03
LINC00598-209ENST00000635966 TOMM70O94826 608 aa8.59□□□□□ -1.03
LINC00598-209ENST00000635966 RFX1P22670 979 aa8.59□□□□□ -1.03
LINC00598-209ENST00000635966 SSFA2P28290 1259 aa8.59□□□□□ -1.03
LINC00598-209ENST00000635966 LMOD3Q0VAK6 560 aa8.59□□□□□ -1.03
LINC00598-209ENST00000635966 MTFR1Q15390 333 aa8.59□□□□□ -1.03
LINC00598-209ENST00000635966 DUSP27Q5VZP5 1158 aa8.59□□□□□ -1.03
LINC00598-209ENST00000635966 GPR161Q8N6U8 529 aaKnown RBP8.59□□□□□ -1.03
LINC00598-209ENST00000635966 CCDC97Q96F63 343 aaPredicted RBP8.59□□□□□ -1.03
LINC00598-209ENST00000635966 PHACTR3Q96KR7 559 aa8.59□□□□□ -1.03
LINC00598-209ENST00000635966 TRERF1Q96PN7 1200 aa8.59□□□□□ -1.03
LINC00598-209ENST00000635966 COL25A1Q9BXS0 654 aaPredicted RBP8.59□□□□□ -1.03
LINC00598-209ENST00000635966 NUCKS1Q9H1E3 243 aaKnown RBP8.59□□□□□ -1.03
LINC00598-209ENST00000635966 CUEDC1Q9NWM3 386 aaPredicted RBP8.59□□□□□ -1.03
LINC00598-209ENST00000635966 C5P01031 1676 aa8.59□□□□□ -1.03
LINC00598-209ENST00000635966 TAF1LQ8IZX4 1826 aa8.59□□□□□ -1.03
LINC00598-209ENST00000635966 TATP17735 454 aaPredicted RBP8.58□□□□□ -1.04
LINC00598-209ENST00000635966 RIPK4P57078 832 aa8.58□□□□□ -1.04
LINC00598-209ENST00000635966 DBN1Q16643 649 aa8.58□□□□□ -1.04
LINC00598-209ENST00000635966 EFHC2Q5JST6 749 aa8.58□□□□□ -1.04
LINC00598-209ENST00000635966 AEBP1Q8IUX7 1158 aa8.58□□□□□ -1.04
LINC00598-209ENST00000635966 TNS4Q8IZW8 715 aa8.58□□□□□ -1.04
LINC00598-209ENST00000635966 ZNF837Q96EG3 531 aaPredicted RBP8.58□□□□□ -1.04
LINC00598-209ENST00000635966 CNTNAP3BQ96NU0 1288 aa8.58□□□□□ -1.04
LINC00598-209ENST00000635966 CNTNAP3Q9BZ76 1288 aa8.58□□□□□ -1.04
LINC00598-209ENST00000635966 SCHIP1Q9P0W5 487 aaPredicted RBP8.58□□□□□ -1.04
LINC00598-209ENST00000635966 CHMP3Q9Y3E7 222 aa8.58□□□□□ -1.04
LINC00598-209ENST00000635966 CICQ96RK0 1608 aaPredicted RBP8.58□□□□□ -1.04
LINC00598-209ENST00000635966 RNF123Q5XPI4 1314 aa8.57□□□□□ -1.04
LINC00598-209ENST00000635966 CYP27B1O15528 508 aa8.57□□□□□ -1.04
LINC00598-209ENST00000635966 HTATSF1O43719 755 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms