RNA–Protein interactions for RNA: ENST00000635682.1

HSPG2-214, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 921 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-214ENST00000635682 G3BP1Q13283 466 aaKnown RBP eCLIP18.31■□□□□ 0.52
HSPG2-214ENST00000635682 PUM3Q15397 648 aaKnown RBP18.31■□□□□ 0.52
HSPG2-214ENST00000635682 LDLRAD1Q5T700 205 aa18.31■□□□□ 0.52
HSPG2-214ENST00000635682 CTU1Q7Z7A3 348 aaKnown RBP18.31■□□□□ 0.52
HSPG2-214ENST00000635682 VEZTQ9HBM0 779 aa18.31■□□□□ 0.52
HSPG2-214ENST00000635682 COG6Q9Y2V7 657 aa18.31■□□□□ 0.52
HSPG2-214ENST00000635682 SPDYE2BA6NHP3 402 aa18.3■□□□□ 0.52
HSPG2-214ENST00000635682 SPDYE6P0CI01 402 aa18.3■□□□□ 0.52
HSPG2-214ENST00000635682 FKBP1AP62942 108 aaKnown RBP18.3■□□□□ 0.52
HSPG2-214ENST00000635682 PDE3AQ14432 1141 aa18.3■□□□□ 0.52
HSPG2-214ENST00000635682 ZNF296Q8WUU4 475 aaPredicted RBP18.3■□□□□ 0.52
HSPG2-214ENST00000635682 ZBTB7BO15156 539 aaPredicted RBP18.29■□□□□ 0.52
HSPG2-214ENST00000635682 MYO1BO43795 1136 aa18.29■□□□□ 0.52
HSPG2-214ENST00000635682 HIBADHP31937 336 aaKnown RBP18.29■□□□□ 0.52
HSPG2-214ENST00000635682 RFX5P48382 616 aaPredicted RBP18.29■□□□□ 0.52
HSPG2-214ENST00000635682 SOX10P56693 466 aa18.29■□□□□ 0.52
HSPG2-214ENST00000635682 MTX1Q13505 466 aa18.29■□□□□ 0.52
HSPG2-214ENST00000635682 SPRYD7Q5W111 196 aa18.29■□□□□ 0.52
HSPG2-214ENST00000635682 TDRD7Q8NHU6 1098 aaKnown RBP18.29■□□□□ 0.52
HSPG2-214ENST00000635682 SLC10A4Q96EP9 437 aa18.29■□□□□ 0.52
HSPG2-214ENST00000635682 FAM84BQ96KN1 310 aaPredicted RBP18.29■□□□□ 0.52
HSPG2-214ENST00000635682 R3HDMLQ9H3Y0 253 aa18.29■□□□□ 0.52
HSPG2-214ENST00000635682 C1orf115Q9H7X2 142 aa18.29■□□□□ 0.52
HSPG2-214ENST00000635682 COPRSQ9NQ92 184 aa18.29■□□□□ 0.52
HSPG2-214ENST00000635682 ECM29Q5VYK3 1845 aa18.28■□□□□ 0.52
HSPG2-214ENST00000635682 FAM205AQ6ZU69 1335 aa18.28■□□□□ 0.52
HSPG2-214ENST00000635682 MFSD14BQ5SR56 506 aa18.28■□□□□ 0.52
HSPG2-214ENST00000635682 NBPF12Q5TAG4 269 aaPredicted RBP18.28■□□□□ 0.52
HSPG2-214ENST00000635682 CLMNQ96JQ2 1002 aa18.28■□□□□ 0.52
HSPG2-214ENST00000635682 PA2G4Q9UQ80 394 aaKnown RBP18.28■□□□□ 0.52
HSPG2-214ENST00000635682 AKAP2Q9Y2D5 859 aa18.28■□□□□ 0.52
HSPG2-214ENST00000635682 GPR25O00155 361 aa18.27■□□□□ 0.52
HSPG2-214ENST00000635682 PPP1R12BO60237 982 aaPredicted RBP18.27■□□□□ 0.52
HSPG2-214ENST00000635682 SREBF2Q12772 1141 aa18.27■□□□□ 0.52
HSPG2-214ENST00000635682 ATP2B3Q16720 1220 aa18.27■□□□□ 0.52
HSPG2-214ENST00000635682 LPIN2Q92539 896 aa18.27■□□□□ 0.52
HSPG2-214ENST00000635682 TTF2Q9UNY4 1162 aaKnown RBP18.27■□□□□ 0.52
HSPG2-214ENST00000635682 IQSEC3Q9UPP2 1182 aaPredicted RBP18.27■□□□□ 0.52
HSPG2-214ENST00000635682 SSC5DA1L4H1 1573 aa18.26■□□□□ 0.51
HSPG2-214ENST00000635682 HMMRO75330 724 aa18.26■□□□□ 0.51
HSPG2-214ENST00000635682 ATP8B2P98198 1209 aa18.26■□□□□ 0.51
HSPG2-214ENST00000635682 RASA3Q14644 834 aa18.26■□□□□ 0.51
HSPG2-214ENST00000635682 GNL3LQ9NVN8 582 aaKnown RBP18.26■□□□□ 0.51
HSPG2-214ENST00000635682 PPP2R3BQ9Y5P8 575 aa18.26■□□□□ 0.51
HSPG2-214ENST00000635682 COL1A1P02452 1464 aaPredicted RBP18.26■□□□□ 0.51
HSPG2-214ENST00000635682 GRIK5Q16478 980 aa18.25■□□□□ 0.51
HSPG2-214ENST00000635682 MAP3K11Q16584 847 aa18.25■□□□□ 0.51
HSPG2-214ENST00000635682 SUPT20HL1Q3ZLR7 823 aa18.25■□□□□ 0.51
HSPG2-214ENST00000635682 TDRD3Q9H7E2 651 aaKnown RBP18.25■□□□□ 0.51
HSPG2-214ENST00000635682 ZNF70Q9UC06 446 aaPredicted RBP18.25■□□□□ 0.51
HSPG2-214ENST00000635682 PNMA6EA0A0J9YXQ4 647 aa18.24■□□□□ 0.51
HSPG2-214ENST00000635682 USP2O75604 605 aaPredicted RBP18.24■□□□□ 0.51
HSPG2-214ENST00000635682 SURF6O75683 361 aaKnown RBP18.24■□□□□ 0.51
HSPG2-214ENST00000635682 CHAF1AQ13111 956 aaPredicted RBP18.24■□□□□ 0.51
HSPG2-214ENST00000635682 GORABQ5T7V8 394 aa18.24■□□□□ 0.51
HSPG2-214ENST00000635682 ATG9AQ7Z3C6 839 aa18.24■□□□□ 0.51
HSPG2-214ENST00000635682 WNK4Q96J92 1243 aa18.24■□□□□ 0.51
HSPG2-214ENST00000635682 HPS5Q9UPZ3 1129 aa18.24■□□□□ 0.51
HSPG2-214ENST00000635682 RRP1P56182 461 aaKnown RBP18.23■□□□□ 0.51
HSPG2-214ENST00000635682 SPDYE2Q495Y8 402 aa18.23■□□□□ 0.51
HSPG2-214ENST00000635682 HSP90AB4PQ58FF6 505 aa18.23■□□□□ 0.51
HSPG2-214ENST00000635682 FBXO33Q7Z6M2 555 aa18.23■□□□□ 0.51
HSPG2-214ENST00000635682 VGLL2Q8N8G2 317 aa18.23■□□□□ 0.51
HSPG2-214ENST00000635682 SERPINA10Q9UK55 444 aa18.23■□□□□ 0.51
HSPG2-214ENST00000635682 PDE4DIPQ5VU43 2346 aa18.22■□□□□ 0.51
HSPG2-214ENST00000635682 MANSC4A6NHS7 340 aaPredicted RBP18.22■□□□□ 0.51
HSPG2-214ENST00000635682 TCP10L2B9ZVM9 353 aa18.22■□□□□ 0.51
HSPG2-214ENST00000635682 FKTNO75072 461 aa18.22■□□□□ 0.51
HSPG2-214ENST00000635682 CRKP46108 304 aa18.22■□□□□ 0.51
HSPG2-214ENST00000635682 IREB2P48200 963 aaKnown RBP18.22■□□□□ 0.51
HSPG2-214ENST00000635682 IFNL1Q8IU54 200 aa18.22■□□□□ 0.51
HSPG2-214ENST00000635682 CDAN1Q8IWY9 1227 aa18.22■□□□□ 0.51
HSPG2-214ENST00000635682 RPAP2Q8IXW5 612 aaPredicted RBP18.22■□□□□ 0.51
HSPG2-214ENST00000635682 NEUROD6Q96NK8 337 aa18.22■□□□□ 0.51
HSPG2-214ENST00000635682 TNRC18O15417 2968 aaPredicted RBP18.22■□□□□ 0.51
HSPG2-214ENST00000635682 IGF2BP3O00425 579 aaKnown RBP eCLIP18.21■□□□□ 0.51
HSPG2-214ENST00000635682 GJA5P36382 358 aa18.21■□□□□ 0.51
HSPG2-214ENST00000635682 BCAMP50895 628 aa18.21■□□□□ 0.51
HSPG2-214ENST00000635682 TFCP2Q12800 502 aa18.21■□□□□ 0.51
HSPG2-214ENST00000635682 PKN2Q16513 984 aaKnown RBP18.21■□□□□ 0.51
HSPG2-214ENST00000635682 CEP85Q6P2H3 762 aa18.21■□□□□ 0.51
HSPG2-214ENST00000635682 SSH3Q8TE77 659 aa18.21■□□□□ 0.51
HSPG2-214ENST00000635682 TBC1D22AQ8WUA7 517 aa18.21■□□□□ 0.51
HSPG2-214ENST00000635682 ZBTB48P10074 688 aaPredicted RBP18.2■□□□□ 0.5
HSPG2-214ENST00000635682 INHBEP58166 350 aa18.2■□□□□ 0.5
HSPG2-214ENST00000635682 POLA2Q14181 598 aa18.2■□□□□ 0.5
HSPG2-214ENST00000635682 NOM1Q5C9Z4 860 aaKnown RBP18.2■□□□□ 0.5
HSPG2-214ENST00000635682 C20orf194Q5TEA3 1177 aa18.2■□□□□ 0.5
HSPG2-214ENST00000635682 ERC1Q8IUD2 1116 aa18.2■□□□□ 0.5
HSPG2-214ENST00000635682 CFHR5Q9BXR6 569 aa18.2■□□□□ 0.5
HSPG2-214ENST00000635682 TMEM39BQ9GZU3 492 aa18.2■□□□□ 0.5
HSPG2-214ENST00000635682 ALDH1A1P00352 501 aa18.19■□□□□ 0.5
HSPG2-214ENST00000635682 FGFR2P21802 821 aa18.19■□□□□ 0.5
HSPG2-214ENST00000635682 TNFAIP1Q13829 316 aa18.19■□□□□ 0.5
HSPG2-214ENST00000635682 ANKRD13AQ8IZ07 590 aa18.19■□□□□ 0.5
HSPG2-214ENST00000635682 TEPSINQ96N21 525 aa18.19■□□□□ 0.5
HSPG2-214ENST00000635682 ELP3Q9H9T3 547 aa18.19■□□□□ 0.5
HSPG2-214ENST00000635682 ZBTB40Q9NUA8 1239 aa18.19■□□□□ 0.5
HSPG2-214ENST00000635682 A0A1B0GUL7 405 aa18.18■□□□□ 0.5
HSPG2-214ENST00000635682 CACNB3P54284 484 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms