RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 MKRN3Q13064 507 aaKnown RBP15.62■□□□□ 0.09
SOX2-OT-247ENST00000628347 PUM3Q15397 648 aaKnown RBP15.62■□□□□ 0.09
SOX2-OT-247ENST00000628347 DZIP1LQ8IYY4 767 aaKnown RBP15.62■□□□□ 0.09
SOX2-OT-247ENST00000628347 KLHDC4Q8TBB5 520 aa15.62■□□□□ 0.09
SOX2-OT-247ENST00000628347 ZNF296Q8WUU4 475 aaPredicted RBP15.62■□□□□ 0.09
SOX2-OT-247ENST00000628347 MRIQ9BWK5 157 aa15.62■□□□□ 0.09
SOX2-OT-247ENST00000628347 FZD1Q9UP38 647 aa15.62■□□□□ 0.09
SOX2-OT-247ENST00000628347 GPR25O00155 361 aa15.61■□□□□ 0.09
SOX2-OT-247ENST00000628347 EYA2O00167 538 aa15.61■□□□□ 0.09
SOX2-OT-247ENST00000628347 USP2O75604 605 aaPredicted RBP15.61■□□□□ 0.09
SOX2-OT-247ENST00000628347 IFIT1P09914 478 aaKnown RBP15.61■□□□□ 0.09
SOX2-OT-247ENST00000628347 PKN2Q16513 984 aaKnown RBP15.61■□□□□ 0.09
SOX2-OT-247ENST00000628347 WNK4Q96J92 1243 aa15.61■□□□□ 0.09
SOX2-OT-247ENST00000628347 CLMNQ96JQ2 1002 aa15.61■□□□□ 0.09
SOX2-OT-247ENST00000628347 TDRD3Q9H7E2 651 aaKnown RBP15.61■□□□□ 0.09
SOX2-OT-247ENST00000628347 FBXO3Q9UK99 471 aa15.61■□□□□ 0.09
SOX2-OT-247ENST00000628347 SUGT1Q9Y2Z0 365 aa15.61■□□□□ 0.09
SOX2-OT-247ENST00000628347 BCAMP50895 628 aa15.6■□□□□ 0.09
SOX2-OT-247ENST00000628347 GRIK5Q16478 980 aa15.6■□□□□ 0.09
SOX2-OT-247ENST00000628347 ANKRD13AQ8IZ07 590 aa15.6■□□□□ 0.09
SOX2-OT-247ENST00000628347 TEPSINQ96N21 525 aa15.6■□□□□ 0.09
SOX2-OT-247ENST00000628347 IQSEC3Q9UPP2 1182 aaPredicted RBP15.6■□□□□ 0.09
SOX2-OT-247ENST00000628347 OTOFQ9HC10 1997 aa15.6■□□□□ 0.09
SOX2-OT-247ENST00000628347 FRAT2O75474 233 aaPredicted RBP15.59■□□□□ 0.09
SOX2-OT-247ENST00000628347 TNNI2P48788 182 aa15.59■□□□□ 0.09
SOX2-OT-247ENST00000628347 CHAF1AQ13111 956 aaPredicted RBP15.59■□□□□ 0.09
SOX2-OT-247ENST00000628347 LPIN2Q92539 896 aa15.59■□□□□ 0.09
SOX2-OT-247ENST00000628347 API5Q9BZZ5 524 aaKnown RBP15.59■□□□□ 0.09
SOX2-OT-247ENST00000628347 MAST3O60307 1309 aa15.59■□□□□ 0.09
SOX2-OT-247ENST00000628347 FKTNO75072 461 aa15.58■□□□□ 0.08
SOX2-OT-247ENST00000628347 CIAO1O76071 339 aa15.58■□□□□ 0.08
SOX2-OT-247ENST00000628347 UBTFL1P0CB47 393 aaPredicted RBP15.58■□□□□ 0.08
SOX2-OT-247ENST00000628347 SLC5A1P13866 664 aa15.58■□□□□ 0.08
SOX2-OT-247ENST00000628347 ATG9AQ7Z3C6 839 aa15.58■□□□□ 0.08
SOX2-OT-247ENST00000628347 IFNL1Q8IU54 200 aa15.58■□□□□ 0.08
SOX2-OT-247ENST00000628347 TEKT1Q969V4 418 aa15.58■□□□□ 0.08
SOX2-OT-247ENST00000628347 ZDHHC15Q96MV8 337 aa15.58■□□□□ 0.08
SOX2-OT-247ENST00000628347 NOB1Q9ULX3 412 aaKnown RBP15.58■□□□□ 0.08
SOX2-OT-247ENST00000628347 HDAC5Q9UQL6 1122 aa15.58■□□□□ 0.08
SOX2-OT-247ENST00000628347 MYH13Q9UKX3 1938 aa15.58■□□□□ 0.08
SOX2-OT-247ENST00000628347 TESPA1A2RU30 521 aaPredicted RBP15.57■□□□□ 0.08
SOX2-OT-247ENST00000628347 ZBTB22O15209 634 aa15.57■□□□□ 0.08
SOX2-OT-247ENST00000628347 GJA5P36382 358 aa15.57■□□□□ 0.08
SOX2-OT-247ENST00000628347 FKBP1CQ5VVH2 108 aa15.57■□□□□ 0.08
SOX2-OT-247ENST00000628347 R3HDMLQ9H3Y0 253 aa15.57■□□□□ 0.08
SOX2-OT-247ENST00000628347 TCP10L2B9ZVM9 353 aa15.56■□□□□ 0.08
SOX2-OT-247ENST00000628347 IGF2BP3O00425 579 aaKnown RBP eCLIP15.56■□□□□ 0.08
SOX2-OT-247ENST00000628347 HHIPL2Q6UWX4 724 aa15.56■□□□□ 0.08
SOX2-OT-247ENST00000628347 FAM83AQ86UY5 434 aa15.56■□□□□ 0.08
SOX2-OT-247ENST00000628347 WDR66Q8TBY9 1149 aa15.56■□□□□ 0.08
SOX2-OT-247ENST00000628347 ARHGAP45Q92619 1136 aa15.56■□□□□ 0.08
SOX2-OT-247ENST00000628347 TMEM39BQ9GZU3 492 aa15.56■□□□□ 0.08
SOX2-OT-247ENST00000628347 HPS5Q9UPZ3 1129 aa15.56■□□□□ 0.08
SOX2-OT-247ENST00000628347 RPAP1Q9BWH6 1393 aaPredicted RBP15.55■□□□□ 0.08
SOX2-OT-247ENST00000628347 RARSP54136 660 aaKnown RBP15.55■□□□□ 0.08
SOX2-OT-247ENST00000628347 APOBEC3HQ6NTF7 200 aaKnown RBP15.55■□□□□ 0.08
SOX2-OT-247ENST00000628347 FBXO46Q6PJ61 603 aaPredicted RBP15.55■□□□□ 0.08
SOX2-OT-247ENST00000628347 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.55■□□□□ 0.08
SOX2-OT-247ENST00000628347 CDAN1Q8IWY9 1227 aa15.55■□□□□ 0.08
SOX2-OT-247ENST00000628347 IL15P40933 162 aaPredicted RBP15.54■□□□□ 0.08
SOX2-OT-247ENST00000628347 MAP3K9P80192 1104 aa15.54■□□□□ 0.08
SOX2-OT-247ENST00000628347 ATP2B3Q16720 1220 aa15.54■□□□□ 0.08
SOX2-OT-247ENST00000628347 OTUD7BQ6GQQ9 843 aa15.54■□□□□ 0.08
SOX2-OT-247ENST00000628347 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.54■□□□□ 0.08
SOX2-OT-247ENST00000628347 ELP3Q9H9T3 547 aa15.54■□□□□ 0.08
SOX2-OT-247ENST00000628347 COPRSQ9NQ92 184 aa15.54■□□□□ 0.08
SOX2-OT-247ENST00000628347 TMOD2Q9NZR1 351 aa15.54■□□□□ 0.08
SOX2-OT-247ENST00000628347 CEP126Q9P2H0 1117 aa15.54■□□□□ 0.08
SOX2-OT-247ENST00000628347 LRRFIP2Q9Y608 721 aaKnown RBP15.54■□□□□ 0.08
SOX2-OT-247ENST00000628347 TNRC18O15417 2968 aaPredicted RBP15.54■□□□□ 0.08
SOX2-OT-247ENST00000628347 INTS3Q68E01 1043 aaKnown RBP15.53■□□□□ 0.08
SOX2-OT-247ENST00000628347 OPTNQ96CV9 577 aa15.53■□□□□ 0.08
SOX2-OT-247ENST00000628347 HOOK2Q96ED9 719 aa15.53■□□□□ 0.08
SOX2-OT-247ENST00000628347 MS4A4AQ96JQ5 239 aa15.53■□□□□ 0.08
SOX2-OT-247ENST00000628347 SALL1Q9NSC2 1324 aa15.52■□□□□ 0.08
SOX2-OT-247ENST00000628347 SEMA3EO15041 775 aa15.52■□□□□ 0.08
SOX2-OT-247ENST00000628347 SOX10P56693 466 aa15.52■□□□□ 0.08
SOX2-OT-247ENST00000628347 VGLL4Q14135 290 aa15.52■□□□□ 0.08
SOX2-OT-247ENST00000628347 MEIS3Q99687 375 aa15.52■□□□□ 0.08
SOX2-OT-247ENST00000628347 PTPN18Q99952 460 aa15.52■□□□□ 0.08
SOX2-OT-247ENST00000628347 SIL1Q9H173 461 aa15.52■□□□□ 0.08
SOX2-OT-247ENST00000628347 GNL3LQ9NVN8 582 aaKnown RBP15.52■□□□□ 0.08
SOX2-OT-247ENST00000628347 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.52■□□□□ 0.08
SOX2-OT-247ENST00000628347 CACNB3P54284 484 aa15.51■□□□□ 0.07
SOX2-OT-247ENST00000628347 MTX1Q13505 466 aa15.51■□□□□ 0.07
SOX2-OT-247ENST00000628347 DENND2AQ9ULE3 1009 aa15.51■□□□□ 0.07
SOX2-OT-247ENST00000628347 PA2G4Q9UQ80 394 aaKnown RBP15.51■□□□□ 0.07
SOX2-OT-247ENST00000628347 CSADQ9Y600 493 aa15.51■□□□□ 0.07
SOX2-OT-247ENST00000628347 PDE4DIPQ5VU43 2346 aa15.51■□□□□ 0.07
SOX2-OT-247ENST00000628347 SPDYE5A6NIY4 337 aa15.5■□□□□ 0.07
SOX2-OT-247ENST00000628347 GNAI3P08754 354 aa15.5■□□□□ 0.07
SOX2-OT-247ENST00000628347 GTF2A2P52657 109 aa15.5■□□□□ 0.07
SOX2-OT-247ENST00000628347 CRHR2Q13324 411 aa15.5■□□□□ 0.07
SOX2-OT-247ENST00000628347 ERO1AQ96HE7 468 aa15.5■□□□□ 0.07
SOX2-OT-247ENST00000628347 DAGLAQ9Y4D2 1042 aa15.5■□□□□ 0.07
SOX2-OT-247ENST00000628347 SNCAIPQ9Y6H5 919 aa15.5■□□□□ 0.07
SOX2-OT-247ENST00000628347 PDS5AQ29RF7 1337 aaKnown RBP15.49■□□□□ 0.07
SOX2-OT-247ENST00000628347 HTTP42858 3142 aa15.49■□□□□ 0.07
SOX2-OT-247ENST00000628347 PRDX5P30044 214 aa15.49■□□□□ 0.07
SOX2-OT-247ENST00000628347 DCAF15Q66K64 600 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms