RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 TMC4Q7Z404 712 aa8.88□□□□□ -0.99
CDKL5-204ENST00000623364 GMLQ99445 158 aa8.88□□□□□ -0.99
CDKL5-204ENST00000623364 PRRX2Q99811 253 aa8.88□□□□□ -0.99
CDKL5-204ENST00000623364 DEFB129Q9H1M3 183 aa8.88□□□□□ -0.99
CDKL5-204ENST00000623364 OGDHLQ9ULD0 1010 aa8.88□□□□□ -0.99
CDKL5-204ENST00000623364 NSFL1CQ9UNZ2 370 aaKnown RBP8.88□□□□□ -0.99
CDKL5-204ENST00000623364 LRRC37A2A6NM11 1700 aa8.88□□□□□ -0.99
CDKL5-204ENST00000623364 SCN9AQ15858 1988 aa8.88□□□□□ -0.99
CDKL5-204ENST00000623364 IBTKQ9P2D0 1353 aaPredicted RBP8.87□□□□□ -0.99
CDKL5-204ENST00000623364 MAP1BP46821 2468 aaKnown RBP8.87□□□□□ -0.99
CDKL5-204ENST00000623364 BTBD19C9JJ37 291 aa8.87□□□□□ -0.99
CDKL5-204ENST00000623364 COL6A1P12109 1028 aa8.87□□□□□ -0.99
CDKL5-204ENST00000623364 PIP4K2AP48426 406 aaPredicted RBP8.87□□□□□ -0.99
CDKL5-204ENST00000623364 HLFQ16534 295 aa8.87□□□□□ -0.99
CDKL5-204ENST00000623364 RIC3Q7Z5B4 369 aa8.87□□□□□ -0.99
CDKL5-204ENST00000623364 MICALL1Q8N3F8 863 aa8.87□□□□□ -0.99
CDKL5-204ENST00000623364 MTMR14Q8NCE2 650 aa8.87□□□□□ -0.99
CDKL5-204ENST00000623364 HERVK_113Q902F9 699 aa8.87□□□□□ -0.99
CDKL5-204ENST00000623364 ZKSCAN4Q969J2 545 aaPredicted RBP8.87□□□□□ -0.99
CDKL5-204ENST00000623364 HMX1Q9NP08 348 aaPredicted RBP8.87□□□□□ -0.99
CDKL5-204ENST00000623364 CACNA1HO95180 2353 aa8.86□□□□□ -0.99
CDKL5-204ENST00000623364 DDX46Q7L014 1031 aaKnown RBP8.86□□□□□ -0.99
CDKL5-204ENST00000623364 PRSS33Q8NF86 280 aa8.86□□□□□ -0.99
CDKL5-204ENST00000623364 ZC3H12CQ9C0D7 883 aaKnown RBP8.86□□□□□ -0.99
CDKL5-204ENST00000623364 CD320Q9NPF0 282 aa8.86□□□□□ -0.99
CDKL5-204ENST00000623364 COG5Q9UP83 839 aa8.86□□□□□ -0.99
CDKL5-204ENST00000623364 PPP2R3BQ9Y5P8 575 aa8.86□□□□□ -0.99
CDKL5-204ENST00000623364 ZNF292O60281 2723 aa8.86□□□□□ -0.99
CDKL5-204ENST00000623364 LTBP2Q14767 1821 aa8.85□□□□□ -0.99
CDKL5-204ENST00000623364 XIRP2A4UGR9 3374 aa8.85□□□□□ -0.99
CDKL5-204ENST00000623364 USP2O75604 605 aaPredicted RBP8.85□□□□□ -0.99
CDKL5-204ENST00000623364 SASH1O94885 1247 aa8.85□□□□□ -0.99
CDKL5-204ENST00000623364 FMNL2Q96PY5 1086 aa8.85□□□□□ -0.99
CDKL5-204ENST00000623364 POLLQ9UGP5 575 aa8.85□□□□□ -0.99
CDKL5-204ENST00000623364 ROCK2O75116 1388 aaKnown RBP8.85□□□□□ -0.99
CDKL5-204ENST00000623364 MGAMO43451 1857 aa8.84□□□□□ -0.99
CDKL5-204ENST00000623364 FXR2P51116 673 aaKnown RBP eCLIP8.84□□□□□ -0.99
CDKL5-204ENST00000623364 GRAPQ13588 217 aa8.84□□□□□ -0.99
CDKL5-204ENST00000623364 ZNF790Q6PG37 636 aa8.84□□□□□ -0.99
CDKL5-204ENST00000623364 DGLUCYQ7Z3D6 616 aa8.84□□□□□ -0.99
CDKL5-204ENST00000623364 PPARGC1BQ86YN6 1023 aaKnown RBP8.84□□□□□ -0.99
CDKL5-204ENST00000623364 GJD3Q8N144 294 aa8.84□□□□□ -0.99
CDKL5-204ENST00000623364 GRAPLQ8TC17 118 aaPredicted RBP8.84□□□□□ -0.99
CDKL5-204ENST00000623364 BADQ92934 168 aa8.84□□□□□ -0.99
CDKL5-204ENST00000623364 RALYQ9UKM9 306 aaKnown RBP8.84□□□□□ -0.99
CDKL5-204ENST00000623364 NAV2Q8IVL1 2488 aa8.83□□□□□ -1
CDKL5-204ENST00000623364 USP17L3A6NCW0 530 aa8.83□□□□□ -1
CDKL5-204ENST00000623364 USP17L4A6NCW7 530 aa8.83□□□□□ -1
CDKL5-204ENST00000623364 HMGCRP04035 888 aa8.83□□□□□ -1
CDKL5-204ENST00000623364 MMP14P50281 582 aa8.83□□□□□ -1
CDKL5-204ENST00000623364 SNAPC2Q13487 334 aa8.83□□□□□ -1
CDKL5-204ENST00000623364 SUSD4Q5VX71 490 aa8.83□□□□□ -1
CDKL5-204ENST00000623364 HFE2Q6ZVN8 426 aa8.83□□□□□ -1
CDKL5-204ENST00000623364 USP17L1Q7RTZ2 530 aa8.83□□□□□ -1
CDKL5-204ENST00000623364 ANKS1AQ92625 1134 aa8.83□□□□□ -1
CDKL5-204ENST00000623364 IRF2BPLQ9H1B7 796 aa8.83□□□□□ -1
CDKL5-204ENST00000623364 KCNH4Q9UQ05 1017 aa8.83□□□□□ -1
CDKL5-204ENST00000623364 ATRNL1Q5VV63 1379 aa8.83□□□□□ -1
CDKL5-204ENST00000623364 KIF20BQ96Q89 1820 aa8.82□□□□□ -1
CDKL5-204ENST00000623364 GVINP1Q7Z2Y8 2422 aa8.82□□□□□ -1
CDKL5-204ENST00000623364 TNPO2O14787 897 aaKnown RBP8.82□□□□□ -1
CDKL5-204ENST00000623364 DCXO43602 365 aa8.82□□□□□ -1
CDKL5-204ENST00000623364 GPTP24298 496 aa8.82□□□□□ -1
CDKL5-204ENST00000623364 SSTR3P32745 418 aaPredicted RBP8.82□□□□□ -1
CDKL5-204ENST00000623364 PPP1R42Q7Z4L9 355 aa8.82□□□□□ -1
CDKL5-204ENST00000623364 USP24Q9UPU5 2620 aa8.81□□□□□ -1
CDKL5-204ENST00000623364 NTSR2O95665 410 aa8.81□□□□□ -1
CDKL5-204ENST00000623364 NBPF12Q5TAG4 269 aaPredicted RBP8.81□□□□□ -1
CDKL5-204ENST00000623364 CCDC129Q6ZRS4 1044 aa8.81□□□□□ -1
CDKL5-204ENST00000623364 AEBP1Q8IUX7 1158 aa8.81□□□□□ -1
CDKL5-204ENST00000623364 PRDM5Q9NQX1 630 aaPredicted RBP8.81□□□□□ -1
CDKL5-204ENST00000623364 FAM86C1Q9NVL1 165 aa8.81□□□□□ -1
CDKL5-204ENST00000623364 POLKQ9UBT6 870 aa8.81□□□□□ -1
CDKL5-204ENST00000623364 CSADQ9Y600 493 aa8.81□□□□□ -1
CDKL5-204ENST00000623364 MAST2Q6P0Q8 1798 aa8.81□□□□□ -1
CDKL5-204ENST00000623364 LRRC37AA6NMS7 1700 aa8.8□□□□□ -1
CDKL5-204ENST00000623364 PSME4Q14997 1843 aa8.8□□□□□ -1
CDKL5-204ENST00000623364 ERVV-1B6SEH8 477 aa8.8□□□□□ -1
CDKL5-204ENST00000623364 PDHXO00330 501 aa8.8□□□□□ -1
CDKL5-204ENST00000623364 GPSM2P81274 684 aa8.8□□□□□ -1
CDKL5-204ENST00000623364 TCF15Q12870 199 aa8.8□□□□□ -1
CDKL5-204ENST00000623364 SLC10A5Q5PT55 438 aa8.8□□□□□ -1
CDKL5-204ENST00000623364 TBC1D16Q8TBP0 767 aa8.8□□□□□ -1
CDKL5-204ENST00000623364 ATOH1Q92858 354 aaPredicted RBP8.8□□□□□ -1
CDKL5-204ENST00000623364 HLA-CQ95604 372 aa8.8□□□□□ -1
CDKL5-204ENST00000623364 SENP6Q9GZR1 1112 aaPredicted RBP8.8□□□□□ -1
CDKL5-204ENST00000623364 TRPC6Q9Y210 931 aa8.8□□□□□ -1
CDKL5-204ENST00000623364 USP16Q9Y5T5 823 aa8.8□□□□□ -1
CDKL5-204ENST00000623364 UBN2Q6ZU65 1347 aa8.8□□□□□ -1
CDKL5-204ENST00000623364 OTOFQ9HC10 1997 aa8.79□□□□□ -1
CDKL5-204ENST00000623364 SLC24A1O60721 1099 aa8.79□□□□□ -1
CDKL5-204ENST00000623364 VGLL4Q14135 290 aa8.79□□□□□ -1
CDKL5-204ENST00000623364 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.79□□□□□ -1
CDKL5-204ENST00000623364 ANKRD23Q86SG2 305 aa8.79□□□□□ -1
CDKL5-204ENST00000623364 COA7Q96BR5 231 aa8.79□□□□□ -1
CDKL5-204ENST00000623364 SH2B1Q9NRF2 756 aaPredicted RBP8.79□□□□□ -1
CDKL5-204ENST00000623364 MYO3BQ8WXR4 1341 aa8.79□□□□□ -1
CDKL5-204ENST00000623364 SOWAHBA6NEL2 793 aa8.78□□□□□ -1
CDKL5-204ENST00000623364 SPDYE5A6NIY4 337 aa8.78□□□□□ -1
CDKL5-204ENST00000623364 BCRP11274 1271 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms