RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 SGPL1O95470 568 aa5.94□□□□□ -1.46
SNCA-213ENST00000618500 GRK4P32298 578 aa5.94□□□□□ -1.46
SNCA-213ENST00000618500 TMPOP42166 694 aaKnown RBP5.94□□□□□ -1.46
SNCA-213ENST00000618500 CCL15Q16663 113 aa5.94□□□□□ -1.46
SNCA-213ENST00000618500 TTLL5Q6EMB2 1281 aa5.94□□□□□ -1.46
SNCA-213ENST00000618500 CD209Q9NNX6 404 aa5.94□□□□□ -1.46
SNCA-213ENST00000618500 PRDM6Q9NQX0 595 aa5.94□□□□□ -1.46
SNCA-213ENST00000618500 MTMR10Q9NXD2 777 aa5.94□□□□□ -1.46
SNCA-213ENST00000618500 SNCAIPQ9Y6H5 919 aa5.94□□□□□ -1.46
SNCA-213ENST00000618500 RPTORQ8N122 1335 aa5.94□□□□□ -1.46
SNCA-213ENST00000618500 H7C1W4 665 aa5.93□□□□□ -1.46
SNCA-213ENST00000618500 DDX58O95786 925 aaKnown RBP5.93□□□□□ -1.46
SNCA-213ENST00000618500 BCRP11274 1271 aa5.93□□□□□ -1.46
SNCA-213ENST00000618500 CFAP100Q494V2 611 aa5.93□□□□□ -1.46
SNCA-213ENST00000618500 MYPNQ86TC9 1320 aa5.93□□□□□ -1.46
SNCA-213ENST00000618500 FOCADQ5VW36 1801 aa5.93□□□□□ -1.46
SNCA-213ENST00000618500 MOGSQ13724 837 aa5.93□□□□□ -1.46
SNCA-213ENST00000618500 ZNF804AQ7Z570 1209 aa5.93□□□□□ -1.46
SNCA-213ENST00000618500 FAM43AQ8N2R8 423 aa5.93□□□□□ -1.46
SNCA-213ENST00000618500 CERS5Q8N5B7 392 aa5.93□□□□□ -1.46
SNCA-213ENST00000618500 COL25A1Q9BXS0 654 aaPredicted RBP5.93□□□□□ -1.46
SNCA-213ENST00000618500 RIPOR2Q9Y4F9 1068 aa5.93□□□□□ -1.46
SNCA-213ENST00000618500 EIF2S2P20042 333 aaKnown RBP5.93□□□□□ -1.46
SNCA-213ENST00000618500 OSBPP22059 807 aa5.93□□□□□ -1.46
SNCA-213ENST00000618500 IGHMBP2P38935 993 aaKnown RBP5.93□□□□□ -1.46
SNCA-213ENST00000618500 CASP7P55210 303 aa5.93□□□□□ -1.46
SNCA-213ENST00000618500 FCGRTP55899 365 aa5.93□□□□□ -1.46
SNCA-213ENST00000618500 CALD1Q05682 793 aaKnown RBP5.93□□□□□ -1.46
SNCA-213ENST00000618500 VGLL4Q14135 290 aa5.93□□□□□ -1.46
SNCA-213ENST00000618500 TBC1D2Q9BYX2 928 aa5.93□□□□□ -1.46
SNCA-213ENST00000618500 IFT57Q9NWB7 429 aa5.93□□□□□ -1.46
SNCA-213ENST00000618500 ZNF70Q9UC06 446 aaPredicted RBP5.93□□□□□ -1.46
SNCA-213ENST00000618500 CSADQ9Y600 493 aa5.93□□□□□ -1.46
SNCA-213ENST00000618500 BTBD19C9JJ37 291 aa5.92□□□□□ -1.46
SNCA-213ENST00000618500 MKRN3Q13064 507 aaKnown RBP5.92□□□□□ -1.46
SNCA-213ENST00000618500 NBPF12Q5TAG4 269 aaPredicted RBP5.92□□□□□ -1.46
SNCA-213ENST00000618500 PRAMEF18Q5VWM3 479 aa5.92□□□□□ -1.46
SNCA-213ENST00000618500 DPF3Q92784 378 aa5.92□□□□□ -1.46
SNCA-213ENST00000618500 SYMPKQ92797 1274 aaKnown RBP5.92□□□□□ -1.46
SNCA-213ENST00000618500 PARK7Q99497 189 aaKnown RBP5.92□□□□□ -1.46
SNCA-213ENST00000618500 A0A0G2JMZ2 1700 aa5.92□□□□□ -1.46
SNCA-213ENST00000618500 AK9Q5TCS8 1911 aa5.92□□□□□ -1.46
SNCA-213ENST00000618500 RIPK4P57078 832 aa5.92□□□□□ -1.46
SNCA-213ENST00000618500 AIMP1Q12904 312 aaKnown RBP5.92□□□□□ -1.46
SNCA-213ENST00000618500 RASA3Q14644 834 aa5.92□□□□□ -1.46
SNCA-213ENST00000618500 U2AF1L4Q8WU68 220 aaKnown RBP5.92□□□□□ -1.46
SNCA-213ENST00000618500 ELP3Q9H9T3 547 aa5.92□□□□□ -1.46
SNCA-213ENST00000618500 TRIM35Q9UPQ4 493 aa5.92□□□□□ -1.46
SNCA-213ENST00000618500 SYNGAP1Q96PV0 1343 aa5.92□□□□□ -1.46
SNCA-213ENST00000618500 RFX7Q2KHR2 1363 aa5.92□□□□□ -1.46
SNCA-213ENST00000618500 PITPNM1O00562 1244 aa5.91□□□□□ -1.46
SNCA-213ENST00000618500 CXCL11O14625 94 aa5.91□□□□□ -1.46
SNCA-213ENST00000618500 ANXA1P04083 346 aa5.91□□□□□ -1.46
SNCA-213ENST00000618500 DCAF15Q66K64 600 aa5.91□□□□□ -1.46
SNCA-213ENST00000618500 TRMT44Q8IYL2 757 aaKnown RBP5.91□□□□□ -1.46
SNCA-213ENST00000618500 TDHQ8IZJ6 230 aa5.91□□□□□ -1.46
SNCA-213ENST00000618500 SH3TC2Q8TF17 1288 aa5.91□□□□□ -1.46
SNCA-213ENST00000618500 MAST3O60307 1309 aa5.91□□□□□ -1.46
SNCA-213ENST00000618500 RLFQ13129 1914 aa5.91□□□□□ -1.46
SNCA-213ENST00000618500 ATP5J2-PTCD1G3V325 749 aa5.91□□□□□ -1.46
SNCA-213ENST00000618500 EVI5O60447 810 aa5.91□□□□□ -1.46
SNCA-213ENST00000618500 CTGFP29279 349 aa5.91□□□□□ -1.46
SNCA-213ENST00000618500 RIC3Q7Z5B4 369 aa5.91□□□□□ -1.46
SNCA-213ENST00000618500 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.91□□□□□ -1.46
SNCA-213ENST00000618500 TDRD7Q8NHU6 1098 aaKnown RBP5.91□□□□□ -1.46
SNCA-213ENST00000618500 ATRNL1Q5VV63 1379 aa5.91□□□□□ -1.46
SNCA-213ENST00000618500 WTIPA6NIX2 430 aaPredicted RBP5.91□□□□□ -1.46
SNCA-213ENST00000618500 POTEB2H3BUK9 544 aa5.91□□□□□ -1.46
SNCA-213ENST00000618500 GTF2IP78347 998 aa5.91□□□□□ -1.46
SNCA-213ENST00000618500 DUSP27Q5VZP5 1158 aa5.91□□□□□ -1.46
SNCA-213ENST00000618500 KSR2Q6VAB6 950 aa5.91□□□□□ -1.46
SNCA-213ENST00000618500 RAET1EQ8TD07 263 aa5.91□□□□□ -1.46
SNCA-213ENST00000618500 PRMT6Q96LA8 375 aaPredicted RBP5.91□□□□□ -1.46
SNCA-213ENST00000618500 MYD88Q99836 296 aa5.91□□□□□ -1.46
SNCA-213ENST00000618500 MXD3Q9BW11 206 aa5.91□□□□□ -1.46
SNCA-213ENST00000618500 ZNF341Q9BYN7 854 aa5.91□□□□□ -1.46
SNCA-213ENST00000618500 GREM2Q9H772 168 aa5.91□□□□□ -1.46
SNCA-213ENST00000618500 IGKV5-2P06315 115 aa5.9□□□□□ -1.46
SNCA-213ENST00000618500 MAP3K10Q02779 954 aa5.9□□□□□ -1.46
SNCA-213ENST00000618500 RALBP1Q15311 655 aa5.9□□□□□ -1.46
SNCA-213ENST00000618500 NECAB2Q7Z6G3 386 aa5.9□□□□□ -1.46
SNCA-213ENST00000618500 KIAA0825Q8IV33 1275 aa5.9□□□□□ -1.46
SNCA-213ENST00000618500 TBC1D22AQ8WUA7 517 aa5.9□□□□□ -1.46
SNCA-213ENST00000618500 ZDHHC15Q96MV8 337 aa5.9□□□□□ -1.46
SNCA-213ENST00000618500 ARHGAP39Q9C0H5 1083 aa5.9□□□□□ -1.46
SNCA-213ENST00000618500 OGDHLQ9ULD0 1010 aa5.9□□□□□ -1.46
SNCA-213ENST00000618500 NEURL1BA8MQ27 555 aa5.9□□□□□ -1.47
SNCA-213ENST00000618500 PSMC4P43686 418 aa5.9□□□□□ -1.47
SNCA-213ENST00000618500 MTFR1Q15390 333 aa5.9□□□□□ -1.47
SNCA-213ENST00000618500 GPAT2Q6NUI2 795 aa5.9□□□□□ -1.47
SNCA-213ENST00000618500 TXNRD3Q86VQ6 643 aa5.9□□□□□ -1.47
SNCA-213ENST00000618500 DEFB123Q8N688 67 aa5.9□□□□□ -1.47
SNCA-213ENST00000618500 RUNDC1Q96C34 613 aa5.9□□□□□ -1.47
SNCA-213ENST00000618500 HTTP42858 3142 aa5.89□□□□□ -1.47
SNCA-213ENST00000618500 A0A0G2JLL6 359 aaPredicted RBP5.89□□□□□ -1.47
SNCA-213ENST00000618500 COL6A1P12109 1028 aa5.89□□□□□ -1.47
SNCA-213ENST00000618500 CHRNDQ07001 517 aa5.89□□□□□ -1.47
SNCA-213ENST00000618500 UBE4AQ14139 1066 aa5.89□□□□□ -1.47
SNCA-213ENST00000618500 CCDC30Q5VVM6 783 aa5.89□□□□□ -1.47
SNCA-213ENST00000618500 PRRT2Q7Z6L0 340 aaPredicted RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms