RNA–Protein interactions for RNA: ENST00000617958.4

CPEB1-215, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-215ENST00000617958 CTCFLQ8NI51 663 aaPredicted RBP12.33□□□□□ -0.44
CPEB1-215ENST00000617958 RHPN1Q8TCX5 695 aa12.33□□□□□ -0.44
CPEB1-215ENST00000617958 ZNF396Q96N95 335 aaPredicted RBP12.33□□□□□ -0.44
CPEB1-215ENST00000617958 EPC1Q9H2F5 836 aa12.33□□□□□ -0.44
CPEB1-215ENST00000617958 ANKZF1Q9H8Y5 726 aa12.33□□□□□ -0.44
CPEB1-215ENST00000617958 KIAA1468Q9P260 1216 aa12.33□□□□□ -0.44
CPEB1-215ENST00000617958 SHOX2O60902 331 aaPredicted RBP12.32□□□□□ -0.44
CPEB1-215ENST00000617958 CHMP4BP1P59074 171 aa12.32□□□□□ -0.44
CPEB1-215ENST00000617958 DDR1Q08345 913 aa12.32□□□□□ -0.44
CPEB1-215ENST00000617958 NCAPHQ15003 741 aa12.32□□□□□ -0.44
CPEB1-215ENST00000617958 BLOC1S2Q6QNY1 142 aa12.32□□□□□ -0.44
CPEB1-215ENST00000617958 EGFL6Q8IUX8 553 aa12.32□□□□□ -0.44
CPEB1-215ENST00000617958 TMEM139Q8IV31 216 aa12.32□□□□□ -0.44
CPEB1-215ENST00000617958 FMR1NBQ8N0W7 255 aaPredicted RBP12.32□□□□□ -0.44
CPEB1-215ENST00000617958 ERCC4Q92889 916 aaPredicted RBP12.32□□□□□ -0.44
CPEB1-215ENST00000617958 LLPHQ9BRT6 129 aaKnown RBP12.32□□□□□ -0.44
CPEB1-215ENST00000617958 RBM28Q9NW13 759 aaKnown RBP12.32□□□□□ -0.44
CPEB1-215ENST00000617958 HMG20BQ9P0W2 317 aa12.32□□□□□ -0.44
CPEB1-215ENST00000617958 IGSF1Q8N6C5 1336 aa12.32□□□□□ -0.44
CPEB1-215ENST00000617958 PPP1R12AO14974 1030 aaPredicted RBP12.32□□□□□ -0.44
CPEB1-215ENST00000617958 STX10O60499 249 aa12.32□□□□□ -0.44
CPEB1-215ENST00000617958 GNG11P61952 73 aa12.32□□□□□ -0.44
CPEB1-215ENST00000617958 FANCCQ00597 558 aa12.32□□□□□ -0.44
CPEB1-215ENST00000617958 SF3B2Q13435 895 aaKnown RBP12.32□□□□□ -0.44
CPEB1-215ENST00000617958 MICALL1Q8N3F8 863 aa12.32□□□□□ -0.44
CPEB1-215ENST00000617958 JCADQ9P266 1359 aa12.32□□□□□ -0.44
CPEB1-215ENST00000617958 CUTAO60888 179 aa12.31□□□□□ -0.44
CPEB1-215ENST00000617958 IFIT2P09913 472 aaKnown RBP12.31□□□□□ -0.44
CPEB1-215ENST00000617958 HNRNPH1P31943 449 aaKnown RBP12.31□□□□□ -0.44
CPEB1-215ENST00000617958 NLRP12P59046 1061 aa12.31□□□□□ -0.44
CPEB1-215ENST00000617958 TOB2Q14106 344 aaPredicted RBP12.31□□□□□ -0.44
CPEB1-215ENST00000617958 MCM6Q14566 821 aa12.31□□□□□ -0.44
CPEB1-215ENST00000617958 NBPF20Q3BBV1 942 aa12.31□□□□□ -0.44
CPEB1-215ENST00000617958 NUTM1Q86Y26 1132 aa12.31□□□□□ -0.44
CPEB1-215ENST00000617958 CNPY4Q8N129 248 aa12.31□□□□□ -0.44
CPEB1-215ENST00000617958 RBM8AQ9Y5S9 174 aaKnown RBP12.31□□□□□ -0.44
CPEB1-215ENST00000617958 VSTM4Q8IW00 320 aa12.31□□□□□ -0.44
CPEB1-215ENST00000617958 TBC1D22AQ8WUA7 517 aa12.31□□□□□ -0.44
CPEB1-215ENST00000617958 BRF1Q92994 677 aa12.31□□□□□ -0.44
CPEB1-215ENST00000617958 WDR24Q96S15 920 aa12.31□□□□□ -0.44
CPEB1-215ENST00000617958 F6X3S4 739 aa12.3□□□□□ -0.44
CPEB1-215ENST00000617958 H3BQV1 296 aa12.3□□□□□ -0.44
CPEB1-215ENST00000617958 MNAT1P51948 309 aa12.3□□□□□ -0.44
CPEB1-215ENST00000617958 SETQ01105 290 aaPredicted RBP12.3□□□□□ -0.44
CPEB1-215ENST00000617958 CASP8Q14790 479 aa12.3□□□□□ -0.44
CPEB1-215ENST00000617958 IFFO2Q5TF58 517 aa12.3□□□□□ -0.44
CPEB1-215ENST00000617958 TTLL5Q6EMB2 1281 aa12.3□□□□□ -0.44
CPEB1-215ENST00000617958 G2E3Q7L622 706 aa12.3□□□□□ -0.44
CPEB1-215ENST00000617958 MRPS27Q92552 414 aaKnown RBP12.3□□□□□ -0.44
CPEB1-215ENST00000617958 IL1RAPL2Q9NP60 686 aa12.3□□□□□ -0.44
CPEB1-215ENST00000617958 SLC27A2O14975 620 aa12.3□□□□□ -0.44
CPEB1-215ENST00000617958 FSIP1Q8NA03 581 aa12.3□□□□□ -0.44
CPEB1-215ENST00000617958 SMARCC2Q8TAQ2 1214 aa12.3□□□□□ -0.44
CPEB1-215ENST00000617958 AFAP1L1Q8TED9 768 aa12.3□□□□□ -0.44
CPEB1-215ENST00000617958 DHX58Q96C10 678 aa12.3□□□□□ -0.44
CPEB1-215ENST00000617958 SLIT3O75094 1523 aa12.3□□□□□ -0.44
CPEB1-215ENST00000617958 DPCR1Q3MIW9 517 aa12.3□□□□□ -0.44
CPEB1-215ENST00000617958 BICC1Q9H694 974 aaKnown RBP12.3□□□□□ -0.44
CPEB1-215ENST00000617958 FAM204AQ9H8W3 233 aa12.3□□□□□ -0.44
CPEB1-215ENST00000617958 LGR6Q9HBX8 967 aa12.3□□□□□ -0.44
CPEB1-215ENST00000617958 CDC23Q9UJX2 597 aa12.3□□□□□ -0.44
CPEB1-215ENST00000617958 TMCO5BA8MYB1 307 aa12.29□□□□□ -0.44
CPEB1-215ENST00000617958 TOM1O60784 492 aa12.29□□□□□ -0.44
CPEB1-215ENST00000617958 ADALQ6DHV7 355 aa12.29□□□□□ -0.44
CPEB1-215ENST00000617958 KCNV1Q6PIU1 500 aa12.29□□□□□ -0.44
CPEB1-215ENST00000617958 PRPF38AQ8NAV1 312 aaKnown RBP12.29□□□□□ -0.44
CPEB1-215ENST00000617958 KAT2BQ92831 832 aa12.29□□□□□ -0.44
CPEB1-215ENST00000617958 EVI5LQ96CN4 794 aa12.29□□□□□ -0.44
CPEB1-215ENST00000617958 EXOC5O00471 708 aa12.29□□□□□ -0.44
CPEB1-215ENST00000617958 MAP4K4O95819 1239 aaPredicted RBP12.29□□□□□ -0.44
CPEB1-215ENST00000617958 KRT32Q14532 448 aa12.29□□□□□ -0.44
CPEB1-215ENST00000617958 GRIPAP1Q4V328 841 aa12.29□□□□□ -0.44
CPEB1-215ENST00000617958 WDR93Q6P2C0 686 aa12.29□□□□□ -0.44
CPEB1-215ENST00000617958 EP400NLQ6ZTU2 488 aa12.29□□□□□ -0.44
CPEB1-215ENST00000617958 CERKQ8TCT0 537 aa12.29□□□□□ -0.44
CPEB1-215ENST00000617958 STK31Q9BXU1 1019 aa12.29□□□□□ -0.44
CPEB1-215ENST00000617958 ABCB6Q9NP58 842 aa12.29□□□□□ -0.44
CPEB1-215ENST00000617958 BTG4Q9NY30 223 aa12.29□□□□□ -0.44
CPEB1-215ENST00000617958 NEDD4P46934 1319 aa12.28□□□□□ -0.44
CPEB1-215ENST00000617958 N4BP1O75113 896 aaKnown RBP12.28□□□□□ -0.44
CPEB1-215ENST00000617958 PRPF6O94906 941 aaKnown RBP12.28□□□□□ -0.44
CPEB1-215ENST00000617958 UBTFL1P0CB47 393 aaPredicted RBP12.28□□□□□ -0.44
CPEB1-215ENST00000617958 ERCC3P19447 782 aa12.28□□□□□ -0.44
CPEB1-215ENST00000617958 TBX2Q13207 712 aaPredicted RBP12.28□□□□□ -0.44
CPEB1-215ENST00000617958 MPRIPQ6WCQ1 1025 aa12.28□□□□□ -0.44
CPEB1-215ENST00000617958 SDF4Q9BRK5 362 aa12.28□□□□□ -0.44
CPEB1-215ENST00000617958 GNL3LQ9NVN8 582 aaKnown RBP12.28□□□□□ -0.44
CPEB1-215ENST00000617958 CAMTA1Q9Y6Y1 1673 aa12.28□□□□□ -0.44
CPEB1-215ENST00000617958 TOP1P11387 765 aaKnown RBP12.28□□□□□ -0.44
CPEB1-215ENST00000617958 FLIIQ13045 1269 aa12.28□□□□□ -0.44
CPEB1-215ENST00000617958 GPATCH3Q96I76 525 aa12.28□□□□□ -0.44
CPEB1-215ENST00000617958 PHRF1Q9P1Y6 1649 aaKnown RBP12.28□□□□□ -0.44
CPEB1-215ENST00000617958 SURF6O75683 361 aaKnown RBP12.27□□□□□ -0.44
CPEB1-215ENST00000617958 MCM3P25205 808 aa12.27□□□□□ -0.44
CPEB1-215ENST00000617958 UBASH3AP57075 661 aa12.27□□□□□ -0.44
CPEB1-215ENST00000617958 C11orf91Q3C1V1 193 aa12.27□□□□□ -0.44
CPEB1-215ENST00000617958 DHX37Q8IY37 1157 aaKnown RBP12.27□□□□□ -0.44
CPEB1-215ENST00000617958 BAG1Q99933 345 aaPredicted RBP12.27□□□□□ -0.44
CPEB1-215ENST00000617958 USP44Q9H0E7 712 aa12.27□□□□□ -0.44
CPEB1-215ENST00000617958 HSD3B7Q9H2F3 369 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms