RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 TCEA2Q15560 299 aa6.91□□□□□ -1.3
RFC3-203ENST00000616236 C21orf62-AS1Q17RA5 79 aa6.91□□□□□ -1.3
RFC3-203ENST00000616236 DALRD3Q5D0E6 543 aaKnown RBP6.91□□□□□ -1.3
RFC3-203ENST00000616236 RPS26P11Q5JNZ5 115 aaPredicted RBP6.91□□□□□ -1.3
RFC3-203ENST00000616236 ODR4Q5SWX8 454 aa6.91□□□□□ -1.3
RFC3-203ENST00000616236 SPATC1Q76KD6 591 aa6.91□□□□□ -1.3
RFC3-203ENST00000616236 KRT26Q7Z3Y9 468 aa6.91□□□□□ -1.3
RFC3-203ENST00000616236 REC114Q7Z4M0 266 aa6.91□□□□□ -1.3
RFC3-203ENST00000616236 NLRP8Q86W28 1048 aa6.91□□□□□ -1.3
RFC3-203ENST00000616236 REXO1Q8N1G1 1221 aaKnown RBP6.91□□□□□ -1.3
RFC3-203ENST00000616236 CEP120Q8N960 986 aa6.91□□□□□ -1.3
RFC3-203ENST00000616236 BHLHE41Q9C0J9 482 aaPredicted RBP6.91□□□□□ -1.3
RFC3-203ENST00000616236 ZNF576Q9H609 170 aa6.91□□□□□ -1.3
RFC3-203ENST00000616236 HOMER2Q9NSB8 354 aa6.91□□□□□ -1.3
RFC3-203ENST00000616236 TLR7Q9NYK1 1049 aaKnown RBP6.91□□□□□ -1.3
RFC3-203ENST00000616236 CD2APQ9Y5K6 639 aa6.91□□□□□ -1.3
RFC3-203ENST00000616236 B2RBV5 119 aa6.9□□□□□ -1.3
RFC3-203ENST00000616236 IMPDH2P12268 514 aa6.9□□□□□ -1.3
RFC3-203ENST00000616236 BMP2P12643 396 aa6.9□□□□□ -1.3
RFC3-203ENST00000616236 SMPD1P17405 629 aa6.9□□□□□ -1.3
RFC3-203ENST00000616236 SSRP1Q08945 709 aaKnown RBP6.9□□□□□ -1.3
RFC3-203ENST00000616236 C6orf118Q5T5N4 469 aa6.9□□□□□ -1.3
RFC3-203ENST00000616236 RUFY4Q6ZNE9 571 aa6.9□□□□□ -1.3
RFC3-203ENST00000616236 CYP4X1Q8N118 509 aa6.9□□□□□ -1.3
RFC3-203ENST00000616236 PRPF38AQ8NAV1 312 aaKnown RBP6.9□□□□□ -1.3
RFC3-203ENST00000616236 RBBP8NLQ8NC74 664 aaPredicted RBP6.9□□□□□ -1.3
RFC3-203ENST00000616236 ASAP3Q8TDY4 903 aa6.9□□□□□ -1.3
RFC3-203ENST00000616236 HPS1Q92902 700 aa6.9□□□□□ -1.3
RFC3-203ENST00000616236 NXPE3Q969Y0 559 aa6.9□□□□□ -1.3
RFC3-203ENST00000616236 ZMYM5Q9UJ78 669 aa6.9□□□□□ -1.3
RFC3-203ENST00000616236 NFKBIEO00221 500 aa6.89□□□□□ -1.31
RFC3-203ENST00000616236 NFKB1P19838 968 aa6.89□□□□□ -1.31
RFC3-203ENST00000616236 BMP6P22004 513 aa6.89□□□□□ -1.31
RFC3-203ENST00000616236 SOX18P35713 384 aa6.89□□□□□ -1.31
RFC3-203ENST00000616236 JAMLQ86YT9 394 aa6.89□□□□□ -1.31
RFC3-203ENST00000616236 PNMA5Q96PV4 448 aa6.89□□□□□ -1.31
RFC3-203ENST00000616236 CEP89Q96ST8 783 aa6.89□□□□□ -1.31
RFC3-203ENST00000616236 TMEM39AQ9NV64 488 aa6.89□□□□□ -1.31
RFC3-203ENST00000616236 PRR12Q9ULL5 1215 aa6.89□□□□□ -1.31
RFC3-203ENST00000616236 KHNYNO15037 678 aaKnown RBP6.88□□□□□ -1.31
RFC3-203ENST00000616236 F11P03951 625 aa6.88□□□□□ -1.31
RFC3-203ENST00000616236 CNGA1P29973 690 aa6.88□□□□□ -1.31
RFC3-203ENST00000616236 CDKN1CP49918 316 aaPredicted RBP6.88□□□□□ -1.31
RFC3-203ENST00000616236 PLAURQ03405 335 aa6.88□□□□□ -1.31
RFC3-203ENST00000616236 GORABQ5T7V8 394 aa6.88□□□□□ -1.31
RFC3-203ENST00000616236 C6orf15Q6UXA7 325 aaPredicted RBP6.88□□□□□ -1.31
RFC3-203ENST00000616236 EXOC8Q8IYI6 725 aa6.88□□□□□ -1.31
RFC3-203ENST00000616236 SYNPOQ8N3V7 929 aa6.88□□□□□ -1.31
RFC3-203ENST00000616236 TMEM102Q8N9M5 508 aaPredicted RBP6.88□□□□□ -1.31
RFC3-203ENST00000616236 ZNF526Q8TF50 670 aaPredicted RBP6.88□□□□□ -1.31
RFC3-203ENST00000616236 NSUN5Q96P11 429 aaKnown RBP6.88□□□□□ -1.31
RFC3-203ENST00000616236 FAM126AQ9BYI3 521 aaPredicted RBP6.88□□□□□ -1.31
RFC3-203ENST00000616236 RBSNQ9H1K0 784 aa6.88□□□□□ -1.31
RFC3-203ENST00000616236 MAGEC2Q9UBF1 373 aaPredicted RBP6.88□□□□□ -1.31
RFC3-203ENST00000616236 CYP8B1Q9UNU6 501 aa6.88□□□□□ -1.31
RFC3-203ENST00000616236 THRAP3Q9Y2W1 955 aaKnown RBP6.88□□□□□ -1.31
RFC3-203ENST00000616236 SAMM50Q9Y512 469 aa6.88□□□□□ -1.31
RFC3-203ENST00000616236 PCDHB14Q9Y5E9 798 aa6.88□□□□□ -1.31
RFC3-203ENST00000616236 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.88□□□□□ -1.31
RFC3-203ENST00000616236 A0A1W2PQH9 124 aa6.87□□□□□ -1.31
RFC3-203ENST00000616236 PDE2AO00408 941 aaPredicted RBP6.87□□□□□ -1.31
RFC3-203ENST00000616236 CAPN5O15484 640 aaPredicted RBP6.87□□□□□ -1.31
RFC3-203ENST00000616236 EFSO43281 561 aa6.87□□□□□ -1.31
RFC3-203ENST00000616236 BPNT1O95861 308 aa6.87□□□□□ -1.31
RFC3-203ENST00000616236 PPP2R3AQ06190 1150 aa6.87□□□□□ -1.31
RFC3-203ENST00000616236 DIEXFQ68CQ4 756 aaKnown RBP6.87□□□□□ -1.31
RFC3-203ENST00000616236 FAM178BQ8IXR5 827 aa6.87□□□□□ -1.31
RFC3-203ENST00000616236 ST13P5Q8NFI4 369 aaPredicted RBP6.87□□□□□ -1.31
RFC3-203ENST00000616236 SGSM3Q96HU1 749 aa6.87□□□□□ -1.31
RFC3-203ENST00000616236 GAS2L1Q99501 681 aaPredicted RBP6.87□□□□□ -1.31
RFC3-203ENST00000616236 EHMT1Q9H9B1 1298 aa6.87□□□□□ -1.31
RFC3-203ENST00000616236 TOR4AQ9NXH8 423 aa6.87□□□□□ -1.31
RFC3-203ENST00000616236 PLAAQ9Y263 795 aa6.87□□□□□ -1.31
RFC3-203ENST00000616236 ATP8A1Q9Y2Q0 1164 aa6.87□□□□□ -1.31
RFC3-203ENST00000616236 TTBK1Q5TCY1 1321 aaPredicted RBP6.86□□□□□ -1.31
RFC3-203ENST00000616236 FIGNL2A6NMB9 653 aa6.86□□□□□ -1.31
RFC3-203ENST00000616236 ATXN7O15265 892 aaPredicted RBP6.86□□□□□ -1.31
RFC3-203ENST00000616236 MAP3K6O95382 1288 aa6.86□□□□□ -1.31
RFC3-203ENST00000616236 FAM157BP0CG42 384 aa6.86□□□□□ -1.31
RFC3-203ENST00000616236 HOXD8P13378 290 aaPredicted RBP6.86□□□□□ -1.31
RFC3-203ENST00000616236 NME2P22392 152 aa6.86□□□□□ -1.31
RFC3-203ENST00000616236 EFHC2Q5JST6 749 aa6.86□□□□□ -1.31
RFC3-203ENST00000616236 MRM1Q6IN84 353 aaKnown RBP6.86□□□□□ -1.31
RFC3-203ENST00000616236 TTC6Q86TZ1 520 aa6.86□□□□□ -1.31
RFC3-203ENST00000616236 CCDC146Q8IYE0 955 aa6.86□□□□□ -1.31
RFC3-203ENST00000616236 C19orf47Q8N9M1 422 aaKnown RBP6.86□□□□□ -1.31
RFC3-203ENST00000616236 GRIN3AQ8TCU5 1115 aa6.86□□□□□ -1.31
RFC3-203ENST00000616236 MUC3BQ9H195 1237 aa6.86□□□□□ -1.31
RFC3-203ENST00000616236 STRN4Q9NRL3 753 aa6.86□□□□□ -1.31
RFC3-203ENST00000616236 POLR3KQ9Y2Y1 108 aaPredicted RBP6.86□□□□□ -1.31
RFC3-203ENST00000616236 DYRK1BQ9Y463 629 aa6.86□□□□□ -1.31
RFC3-203ENST00000616236 DCDC2BA2VCK2 349 aa6.85□□□□□ -1.31
RFC3-203ENST00000616236 TTLL8A6PVC2 850 aa6.85□□□□□ -1.31
RFC3-203ENST00000616236 TNFRSF10AO00220 468 aa6.85□□□□□ -1.31
RFC3-203ENST00000616236 KCNQ2O43526 872 aa6.85□□□□□ -1.31
RFC3-203ENST00000616236 GDF9O60383 454 aa6.85□□□□□ -1.31
RFC3-203ENST00000616236 GRIN3BO60391 1043 aa6.85□□□□□ -1.31
RFC3-203ENST00000616236 FAM153BP0C7A2 387 aa6.85□□□□□ -1.31
RFC3-203ENST00000616236 POU3F3P20264 500 aaPredicted RBP6.85□□□□□ -1.31
RFC3-203ENST00000616236 TBX4P57082 545 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms