RNA–Protein interactions for RNA: ENST00000616030.4

LINC00649-217, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 714 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-217ENST00000616030 ATP2B3Q16720 1220 aa12.91□□□□□ -0.34
LINC00649-217ENST00000616030 VPS37DQ86XT2 251 aa12.91□□□□□ -0.34
LINC00649-217ENST00000616030 CCDC102AQ96A19 550 aa12.91□□□□□ -0.34
LINC00649-217ENST00000616030 PA2G4Q9UQ80 394 aaKnown RBP12.91□□□□□ -0.34
LINC00649-217ENST00000616030 MAST3O60307 1309 aa12.9□□□□□ -0.34
LINC00649-217ENST00000616030 ZBTB7BO15156 539 aaPredicted RBP12.9□□□□□ -0.34
LINC00649-217ENST00000616030 CTCFP49711 727 aaPredicted RBP12.9□□□□□ -0.34
LINC00649-217ENST00000616030 SPDYE2Q495Y8 402 aa12.9□□□□□ -0.34
LINC00649-217ENST00000616030 SSH3Q8TE77 659 aa12.9□□□□□ -0.34
LINC00649-217ENST00000616030 CCDC136Q96JN2 1154 aa12.9□□□□□ -0.34
LINC00649-217ENST00000616030 PRMT6Q96LA8 375 aaPredicted RBP12.9□□□□□ -0.34
LINC00649-217ENST00000616030 SIL1Q9H173 461 aa12.9□□□□□ -0.34
LINC00649-217ENST00000616030 TTF2Q9UNY4 1162 aaKnown RBP12.9□□□□□ -0.34
LINC00649-217ENST00000616030 AOX1Q06278 1338 aa12.89□□□□□ -0.35
LINC00649-217ENST00000616030 PNMA6EA0A0J9YXQ4 647 aa12.89□□□□□ -0.35
LINC00649-217ENST00000616030 MYO1BO43795 1136 aa12.89□□□□□ -0.35
LINC00649-217ENST00000616030 GRIK5Q16478 980 aa12.89□□□□□ -0.35
LINC00649-217ENST00000616030 COL13A1Q5TAT6 717 aaPredicted RBP12.89□□□□□ -0.35
LINC00649-217ENST00000616030 RASAL3Q86YV0 1011 aa12.89□□□□□ -0.35
LINC00649-217ENST00000616030 ITPRIPQ8IWB1 547 aa12.89□□□□□ -0.35
LINC00649-217ENST00000616030 WDR66Q8TBY9 1149 aa12.89□□□□□ -0.35
LINC00649-217ENST00000616030 AIDAQ96BJ3 306 aa12.89□□□□□ -0.35
LINC00649-217ENST00000616030 ZDHHC15Q96MV8 337 aa12.89□□□□□ -0.35
LINC00649-217ENST00000616030 DEFB129Q9H1M3 183 aa12.89□□□□□ -0.35
LINC00649-217ENST00000616030 JAG2Q9Y219 1238 aa12.89□□□□□ -0.35
LINC00649-217ENST00000616030 PCDHAC2Q9Y5I4 1007 aa12.89□□□□□ -0.35
LINC00649-217ENST00000616030 RPAP1Q9BWH6 1393 aaPredicted RBP12.89□□□□□ -0.35
LINC00649-217ENST00000616030 OTOFQ9HC10 1997 aa12.89□□□□□ -0.35
LINC00649-217ENST00000616030 F8W031 263 aaPredicted RBP12.88□□□□□ -0.35
LINC00649-217ENST00000616030 AOC2O75106 756 aa12.88□□□□□ -0.35
LINC00649-217ENST00000616030 HSPA8P11142 646 aaKnown RBP12.88□□□□□ -0.35
LINC00649-217ENST00000616030 NF2P35240 595 aa12.88□□□□□ -0.35
LINC00649-217ENST00000616030 CRKP46108 304 aa12.88□□□□□ -0.35
LINC00649-217ENST00000616030 TNFAIP1Q13829 316 aa12.88□□□□□ -0.35
LINC00649-217ENST00000616030 LDLRAD1Q5T700 205 aa12.88□□□□□ -0.35
LINC00649-217ENST00000616030 IFFO2Q5TF58 517 aa12.88□□□□□ -0.35
LINC00649-217ENST00000616030 FKBP1CQ5VVH2 108 aa12.88□□□□□ -0.35
LINC00649-217ENST00000616030 HHIPL2Q6UWX4 724 aa12.88□□□□□ -0.35
LINC00649-217ENST00000616030 REM2Q8IYK8 340 aaPredicted RBP12.88□□□□□ -0.35
LINC00649-217ENST00000616030 GPR108Q9NPR9 543 aa12.88□□□□□ -0.35
LINC00649-217ENST00000616030 SAGE1Q9NXZ1 904 aa12.88□□□□□ -0.35
LINC00649-217ENST00000616030 AKAP2Q9Y2D5 859 aa12.88□□□□□ -0.35
LINC00649-217ENST00000616030 PHKA1P46020 1223 aa12.87□□□□□ -0.35
LINC00649-217ENST00000616030 ATP8B2P98198 1209 aa12.87□□□□□ -0.35
LINC00649-217ENST00000616030 CCDC102BQ68D86 513 aa12.87□□□□□ -0.35
LINC00649-217ENST00000616030 TEKT1Q969V4 418 aa12.87□□□□□ -0.35
LINC00649-217ENST00000616030 DENND2AQ9ULE3 1009 aa12.87□□□□□ -0.35
LINC00649-217ENST00000616030 IQSEC3Q9UPP2 1182 aaPredicted RBP12.87□□□□□ -0.35
LINC00649-217ENST00000616030 NOP58Q9Y2X3 529 aaKnown RBP12.87□□□□□ -0.35
LINC00649-217ENST00000616030 AKAP11Q9UKA4 1901 aa12.86□□□□□ -0.35
LINC00649-217ENST00000616030 A0A1B0GUL7 405 aa12.86□□□□□ -0.35
LINC00649-217ENST00000616030 FRAT2O75474 233 aaPredicted RBP12.86□□□□□ -0.35
LINC00649-217ENST00000616030 ZNF157P51786 506 aaPredicted RBP12.86□□□□□ -0.35
LINC00649-217ENST00000616030 TFCP2Q12800 502 aa12.86□□□□□ -0.35
LINC00649-217ENST00000616030 CHAF1AQ13111 956 aaPredicted RBP12.86□□□□□ -0.35
LINC00649-217ENST00000616030 B4GALNT3Q6L9W6 998 aa12.86□□□□□ -0.35
LINC00649-217ENST00000616030 APOBEC3HQ6NTF7 200 aaKnown RBP12.86□□□□□ -0.35
LINC00649-217ENST00000616030 PAXIP1Q6ZW49 1069 aaPredicted RBP12.86□□□□□ -0.35
LINC00649-217ENST00000616030 TEPSINQ96N21 525 aa12.86□□□□□ -0.35
LINC00649-217ENST00000616030 GNL3LQ9NVN8 582 aaKnown RBP12.86□□□□□ -0.35
LINC00649-217ENST00000616030 ZNF70Q9UC06 446 aaPredicted RBP12.86□□□□□ -0.35
LINC00649-217ENST00000616030 SCAF8Q9UPN6 1271 aaKnown RBP12.86□□□□□ -0.35
LINC00649-217ENST00000616030 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.86□□□□□ -0.35
LINC00649-217ENST00000616030 RFX7Q2KHR2 1363 aa12.85□□□□□ -0.35
LINC00649-217ENST00000616030 MAST2Q6P0Q8 1798 aa12.85□□□□□ -0.35
LINC00649-217ENST00000616030 CLRN2A0PK11 232 aa12.85□□□□□ -0.35
LINC00649-217ENST00000616030 ARID4AP29374 1257 aaPredicted RBP12.85□□□□□ -0.35
LINC00649-217ENST00000616030 ADORA1P30542 326 aa12.85□□□□□ -0.35
LINC00649-217ENST00000616030 RASGRF1Q13972 1273 aa12.85□□□□□ -0.35
LINC00649-217ENST00000616030 RASA3Q14644 834 aa12.85□□□□□ -0.35
LINC00649-217ENST00000616030 PRAMEF18Q5VWM3 479 aa12.85□□□□□ -0.35
LINC00649-217ENST00000616030 ARMC9Q7Z3E5 817 aa12.85□□□□□ -0.35
LINC00649-217ENST00000616030 FAM83AQ86UY5 434 aa12.85□□□□□ -0.35
LINC00649-217ENST00000616030 ZGPATQ8N5A5 531 aaKnown RBP12.85□□□□□ -0.35
LINC00649-217ENST00000616030 ZIC5Q96T25 663 aa12.85□□□□□ -0.35
LINC00649-217ENST00000616030 MYH2Q9UKX2 1941 aa12.84□□□□□ -0.35
LINC00649-217ENST00000616030 IGSF3O75054 1194 aa12.84□□□□□ -0.35
LINC00649-217ENST00000616030 PRDX5P30044 214 aa12.84□□□□□ -0.35
LINC00649-217ENST00000616030 SUPT20HL1Q3ZLR7 823 aa12.84□□□□□ -0.35
LINC00649-217ENST00000616030 CEP85Q6P2H3 762 aa12.84□□□□□ -0.35
LINC00649-217ENST00000616030 MOB2Q70IA6 237 aa12.84□□□□□ -0.35
LINC00649-217ENST00000616030 XAGE2Q96GT9 111 aa12.84□□□□□ -0.35
LINC00649-217ENST00000616030 BEGAINQ9BUH8 593 aa12.84□□□□□ -0.35
LINC00649-217ENST00000616030 TDRD3Q9H7E2 651 aaKnown RBP12.84□□□□□ -0.35
LINC00649-217ENST00000616030 RNF216Q9NWF9 866 aaPredicted RBP12.84□□□□□ -0.35
LINC00649-217ENST00000616030 GAKO14976 1311 aa12.84□□□□□ -0.35
LINC00649-217ENST00000616030 RBM5P52756 815 aaKnown RBP eCLIP12.83□□□□□ -0.36
LINC00649-217ENST00000616030 LBX1P52954 281 aa12.83□□□□□ -0.36
LINC00649-217ENST00000616030 TIMM10P62072 90 aa12.83□□□□□ -0.36
LINC00649-217ENST00000616030 FAM163AQ96GL9 167 aaPredicted RBP12.83□□□□□ -0.36
LINC00649-217ENST00000616030 ZNF512BQ96KM6 892 aaPredicted RBP12.83□□□□□ -0.36
LINC00649-217ENST00000616030 CSRNP1Q96S65 589 aa12.83□□□□□ -0.36
LINC00649-217ENST00000616030 CFHR5Q9BXR6 569 aa12.83□□□□□ -0.36
LINC00649-217ENST00000616030 ZBTB40Q9NUA8 1239 aa12.83□□□□□ -0.36
LINC00649-217ENST00000616030 DAGLAQ9Y4D2 1042 aa12.83□□□□□ -0.36
LINC00649-217ENST00000616030 UBE2Q2LH0YL09 131 aa12.82□□□□□ -0.36
LINC00649-217ENST00000616030 PPP1R12BO60237 982 aaPredicted RBP12.82□□□□□ -0.36
LINC00649-217ENST00000616030 LDHBP07195 334 aaKnown RBP12.82□□□□□ -0.36
LINC00649-217ENST00000616030 ZBTB48P10074 688 aaPredicted RBP12.82□□□□□ -0.36
LINC00649-217ENST00000616030 TM4SF4P48230 202 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms