RNA–Protein interactions for RNA: ENST00000612199.4

SRGAP2B-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRGAP2B, Length 7,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-204ENST00000612199 GPHNQ9NQX3 736 aaPredicted RBP10.72□□□□□ -0.69
SRGAP2B-204ENST00000612199 GINS2Q9Y248 185 aa10.72□□□□□ -0.69
SRGAP2B-204ENST00000612199 MAST1Q9Y2H9 1570 aa10.72□□□□□ -0.69
SRGAP2B-204ENST00000612199 TSPY3P0CV98 308 aa10.72□□□□□ -0.69
SRGAP2B-204ENST00000612199 TSPY8P0CW00 308 aa10.72□□□□□ -0.69
SRGAP2B-204ENST00000612199 TMC6Q7Z403 805 aa10.72□□□□□ -0.69
SRGAP2B-204ENST00000612199 RPUSD2Q8IZ73 545 aaKnown RBP10.72□□□□□ -0.69
SRGAP2B-204ENST00000612199 ZNF594Q96JF6 807 aaPredicted RBP10.72□□□□□ -0.69
SRGAP2B-204ENST00000612199 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.72□□□□□ -0.69
SRGAP2B-204ENST00000612199 TCP11L1Q9NUJ3 509 aa10.72□□□□□ -0.69
SRGAP2B-204ENST00000612199 TRPM2O94759 1503 aa10.71□□□□□ -0.69
SRGAP2B-204ENST00000612199 NBPF7P0C2Y1 421 aaPredicted RBP10.71□□□□□ -0.69
SRGAP2B-204ENST00000612199 PPP2R5DQ14738 602 aa10.71□□□□□ -0.69
SRGAP2B-204ENST00000612199 CACNA2D4Q7Z3S7 1137 aa10.71□□□□□ -0.69
SRGAP2B-204ENST00000612199 SYCP3Q8IZU3 236 aa10.71□□□□□ -0.69
SRGAP2B-204ENST00000612199 MAGEB6Q8N7X4 407 aa10.71□□□□□ -0.69
SRGAP2B-204ENST00000612199 GOLGA6CA6NDK9 693 aa10.71□□□□□ -0.69
SRGAP2B-204ENST00000612199 GOLGA6BA6NDN3 693 aa10.71□□□□□ -0.69
SRGAP2B-204ENST00000612199 GOLGA6DP0CG33 693 aa10.71□□□□□ -0.69
SRGAP2B-204ENST00000612199 SP4Q02446 784 aa10.71□□□□□ -0.69
SRGAP2B-204ENST00000612199 CREB3L3Q68CJ9 461 aa10.71□□□□□ -0.69
SRGAP2B-204ENST00000612199 ATRIPQ8WXE1 791 aa10.71□□□□□ -0.69
SRGAP2B-204ENST00000612199 ZFYVE1Q9HBF4 777 aa10.71□□□□□ -0.69
SRGAP2B-204ENST00000612199 GOLGA6AQ9NYA3 693 aa10.71□□□□□ -0.69
SRGAP2B-204ENST00000612199 MCM3P25205 808 aa10.71□□□□□ -0.69
SRGAP2B-204ENST00000612199 AFMP43652 599 aa10.71□□□□□ -0.69
SRGAP2B-204ENST00000612199 HS1BP3Q53T59 392 aa10.71□□□□□ -0.69
SRGAP2B-204ENST00000612199 ZNF830Q96NB3 372 aaPredicted RBP10.71□□□□□ -0.69
SRGAP2B-204ENST00000612199 PBRM1Q86U86 1689 aa10.71□□□□□ -0.7
SRGAP2B-204ENST00000612199 LTKP29376 864 aa10.71□□□□□ -0.7
SRGAP2B-204ENST00000612199 KCNG4Q8TDN1 519 aa10.71□□□□□ -0.7
SRGAP2B-204ENST00000612199 NUP88Q99567 741 aaPredicted RBP10.71□□□□□ -0.7
SRGAP2B-204ENST00000612199 PNMA6EA0A0J9YXQ4 647 aa10.71□□□□□ -0.7
SRGAP2B-204ENST00000612199 USO1O60763 962 aaKnown RBP10.71□□□□□ -0.7
SRGAP2B-204ENST00000612199 AMPD3Q01432 767 aa10.71□□□□□ -0.7
SRGAP2B-204ENST00000612199 MAP9Q49MG5 647 aa10.71□□□□□ -0.7
SRGAP2B-204ENST00000612199 ESR2Q92731 530 aa10.71□□□□□ -0.7
SRGAP2B-204ENST00000612199 AFG3L2Q9Y4W6 797 aa10.71□□□□□ -0.7
SRGAP2B-204ENST00000612199 KIF5AQ12840 1032 aa10.7□□□□□ -0.7
SRGAP2B-204ENST00000612199 ZNF467Q7Z7K2 595 aaPredicted RBP10.7□□□□□ -0.7
SRGAP2B-204ENST00000612199 INTS4Q96HW7 963 aaKnown RBP10.7□□□□□ -0.7
SRGAP2B-204ENST00000612199 NAP1L3Q99457 506 aaPredicted RBP10.7□□□□□ -0.7
SRGAP2B-204ENST00000612199 USP19O94966 1318 aa10.7□□□□□ -0.7
SRGAP2B-204ENST00000612199 CHL1O00533 1208 aa10.7□□□□□ -0.7
SRGAP2B-204ENST00000612199 GJC1P36383 396 aa10.7□□□□□ -0.7
SRGAP2B-204ENST00000612199 RTN1Q16799 776 aa10.7□□□□□ -0.7
SRGAP2B-204ENST00000612199 CCDC24Q8N4L8 307 aa10.7□□□□□ -0.7
SRGAP2B-204ENST00000612199 PAIP2Q9BPZ3 127 aaKnown RBP10.7□□□□□ -0.7
SRGAP2B-204ENST00000612199 DACT1Q9NYF0 836 aa10.7□□□□□ -0.7
SRGAP2B-204ENST00000612199 RNF217Q8TC41 542 aa10.7□□□□□ -0.7
SRGAP2B-204ENST00000612199 GANCQ8TET4 914 aa10.7□□□□□ -0.7
SRGAP2B-204ENST00000612199 MXRA7P84157 204 aa10.7□□□□□ -0.7
SRGAP2B-204ENST00000612199 PRKG1Q13976 671 aa10.7□□□□□ -0.7
SRGAP2B-204ENST00000612199 ZKSCAN3Q9BRR0 538 aa10.7□□□□□ -0.7
SRGAP2B-204ENST00000612199 KRT23Q9C075 422 aa10.7□□□□□ -0.7
SRGAP2B-204ENST00000612199 RAD50Q92878 1312 aa10.7□□□□□ -0.7
SRGAP2B-204ENST00000612199 HLA-DOAP06340 250 aa10.7□□□□□ -0.7
SRGAP2B-204ENST00000612199 PRIMPOLQ96LW4 560 aa10.7□□□□□ -0.7
SRGAP2B-204ENST00000612199 CNNM2Q9H8M5 875 aa10.7□□□□□ -0.7
SRGAP2B-204ENST00000612199 EDC4Q6P2E9 1401 aaKnown RBP10.7□□□□□ -0.7
SRGAP2B-204ENST00000612199 INSRP06213 1382 aa10.7□□□□□ -0.7
SRGAP2B-204ENST00000612199 F13A1P00488 732 aa10.7□□□□□ -0.7
SRGAP2B-204ENST00000612199 PDE6AP16499 860 aa10.7□□□□□ -0.7
SRGAP2B-204ENST00000612199 RIMBP2O15034 1052 aa10.69□□□□□ -0.7
SRGAP2B-204ENST00000612199 ZRANB2O95218 330 aaKnown RBP eCLIP10.69□□□□□ -0.7
SRGAP2B-204ENST00000612199 SYKP43405 635 aa10.69□□□□□ -0.7
SRGAP2B-204ENST00000612199 DAAM2Q86T65 1068 aa10.69□□□□□ -0.7
SRGAP2B-204ENST00000612199 PCDH11XQ9BZA7 1347 aa10.69□□□□□ -0.7
SRGAP2B-204ENST00000612199 PCDH11YQ9BZA8 1340 aa10.69□□□□□ -0.7
SRGAP2B-204ENST00000612199 SBNO1A3KN83 1393 aa10.69□□□□□ -0.7
SRGAP2B-204ENST00000612199 PTPRTO14522 1441 aa10.69□□□□□ -0.7
SRGAP2B-204ENST00000612199 RNF113AO15541 343 aaKnown RBP10.69□□□□□ -0.7
SRGAP2B-204ENST00000612199 PHACTR2O75167 634 aa10.69□□□□□ -0.7
SRGAP2B-204ENST00000612199 PAFAH1B1P43034 410 aa10.69□□□□□ -0.7
SRGAP2B-204ENST00000612199 TCERG1LQ5VWI1 586 aa10.69□□□□□ -0.7
SRGAP2B-204ENST00000612199 TPTE2Q6XPS3 522 aa10.69□□□□□ -0.7
SRGAP2B-204ENST00000612199 SMARCC1Q92922 1105 aaPredicted RBP10.69□□□□□ -0.7
SRGAP2B-204ENST00000612199 CGNQ9P2M7 1197 aaKnown RBP10.69□□□□□ -0.7
SRGAP2B-204ENST00000612199 RTCBQ9Y3I0 505 aaKnown RBP10.69□□□□□ -0.7
SRGAP2B-204ENST00000612199 HEATR3Q7Z4Q2 680 aa10.69□□□□□ -0.7
SRGAP2B-204ENST00000612199 IPO4Q8TEX9 1081 aaKnown RBP10.69□□□□□ -0.7
SRGAP2B-204ENST00000612199 MRPS27Q92552 414 aaKnown RBP10.69□□□□□ -0.7
SRGAP2B-204ENST00000612199 DBNDD2Q9BQY9 259 aa10.69□□□□□ -0.7
SRGAP2B-204ENST00000612199 USP26Q9BXU7 913 aa10.69□□□□□ -0.7
SRGAP2B-204ENST00000612199 MTIF2P46199 727 aaKnown RBP10.69□□□□□ -0.7
SRGAP2B-204ENST00000612199 TDRD12Q587J7 1177 aaKnown RBP10.69□□□□□ -0.7
SRGAP2B-204ENST00000612199 VEZTQ9HBM0 779 aa10.69□□□□□ -0.7
SRGAP2B-204ENST00000612199 CABP5Q9NP86 173 aa10.69□□□□□ -0.7
SRGAP2B-204ENST00000612199 BABAM1Q9NWV8 329 aa10.69□□□□□ -0.7
SRGAP2B-204ENST00000612199 ZSCAN32Q9NX65 697 aa10.69□□□□□ -0.7
SRGAP2B-204ENST00000612199 ADGRL2O95490 1459 aa10.69□□□□□ -0.7
SRGAP2B-204ENST00000612199 CASQ1P31415 396 aa10.69□□□□□ -0.7
SRGAP2B-204ENST00000612199 ZBTB16Q05516 673 aa10.69□□□□□ -0.7
SRGAP2B-204ENST00000612199 PRPF4BQ13523 1007 aaKnown RBP10.69□□□□□ -0.7
SRGAP2B-204ENST00000612199 RAB3GAP1Q15042 981 aa10.69□□□□□ -0.7
SRGAP2B-204ENST00000612199 GPATCH11Q8N954 259 aa10.69□□□□□ -0.7
SRGAP2B-204ENST00000612199 MCM9Q9NXL9 1143 aa10.69□□□□□ -0.7
SRGAP2B-204ENST00000612199 TFCP2L1Q9NZI6 479 aa10.69□□□□□ -0.7
SRGAP2B-204ENST00000612199 FOXD4Q12950 439 aaPredicted RBP10.68□□□□□ -0.7
SRGAP2B-204ENST00000612199 CCDC65Q8IXS2 484 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms