RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 ADALQ6DHV7 355 aa12.4□□□□□ -0.42
CDC42EP3-206ENST00000611976 SLF2Q8IX21 1173 aa12.4□□□□□ -0.42
CDC42EP3-206ENST00000611976 MLKLQ8NB16 471 aa12.4□□□□□ -0.42
CDC42EP3-206ENST00000611976 HECW2Q9P2P5 1572 aa12.4□□□□□ -0.42
CDC42EP3-206ENST00000611976 LDHCP07864 332 aa12.4□□□□□ -0.42
CDC42EP3-206ENST00000611976 KCNA6P17658 529 aa12.4□□□□□ -0.42
CDC42EP3-206ENST00000611976 IFFO1Q0D2I5 559 aa12.4□□□□□ -0.42
CDC42EP3-206ENST00000611976 TRIM14Q14142 442 aa12.4□□□□□ -0.42
CDC42EP3-206ENST00000611976 CCDC96Q2M329 555 aa12.4□□□□□ -0.42
CDC42EP3-206ENST00000611976 CHAMP1Q96JM3 812 aa12.4□□□□□ -0.42
CDC42EP3-206ENST00000611976 TMEM2Q9UHN6 1383 aa12.4□□□□□ -0.42
CDC42EP3-206ENST00000611976 A0A0D9SFI3 127 aa12.4□□□□□ -0.42
CDC42EP3-206ENST00000611976 NR1I2O75469 434 aa12.4□□□□□ -0.42
CDC42EP3-206ENST00000611976 IDEP14735 1019 aa12.4□□□□□ -0.42
CDC42EP3-206ENST00000611976 CDC25BP30305 580 aa12.4□□□□□ -0.42
CDC42EP3-206ENST00000611976 IFI16Q16666 785 aaKnown RBP12.4□□□□□ -0.42
CDC42EP3-206ENST00000611976 IQUBQ8NA54 791 aa12.4□□□□□ -0.42
CDC42EP3-206ENST00000611976 ZNF274Q96GC6 653 aaPredicted RBP12.4□□□□□ -0.42
CDC42EP3-206ENST00000611976 ABCA6Q8N139 1617 aa12.4□□□□□ -0.42
CDC42EP3-206ENST00000611976 OPA1O60313 960 aa12.4□□□□□ -0.42
CDC42EP3-206ENST00000611976 PFKFB2O60825 505 aa12.4□□□□□ -0.42
CDC42EP3-206ENST00000611976 BAG3O95817 575 aa12.4□□□□□ -0.42
CDC42EP3-206ENST00000611976 IGSF3O75054 1194 aa12.39□□□□□ -0.43
CDC42EP3-206ENST00000611976 TIMM10P62072 90 aa12.39□□□□□ -0.43
CDC42EP3-206ENST00000611976 HLTFQ14527 1009 aaKnown RBP eCLIP12.39□□□□□ -0.43
CDC42EP3-206ENST00000611976 TDRD7Q8NHU6 1098 aaKnown RBP12.39□□□□□ -0.43
CDC42EP3-206ENST00000611976 RBM28Q9NW13 759 aaKnown RBP12.39□□□□□ -0.43
CDC42EP3-206ENST00000611976 QRICH2Q9H0J4 1663 aa12.39□□□□□ -0.43
CDC42EP3-206ENST00000611976 GLI2P10070 1586 aa12.39□□□□□ -0.43
CDC42EP3-206ENST00000611976 UNC5CLQ8IV45 518 aa12.39□□□□□ -0.43
CDC42EP3-206ENST00000611976 TMEM87AQ8NBN3 555 aa12.39□□□□□ -0.43
CDC42EP3-206ENST00000611976 MAP4K1Q92918 833 aa12.39□□□□□ -0.43
CDC42EP3-206ENST00000611976 REREQ9P2R6 1566 aa12.39□□□□□ -0.43
CDC42EP3-206ENST00000611976 TTF2Q9UNY4 1162 aaKnown RBP12.39□□□□□ -0.43
CDC42EP3-206ENST00000611976 BICDL2A1A5D9 508 aa12.39□□□□□ -0.43
CDC42EP3-206ENST00000611976 DEXIO95424 95 aa12.39□□□□□ -0.43
CDC42EP3-206ENST00000611976 NBPF11Q86T75 865 aa12.39□□□□□ -0.43
CDC42EP3-206ENST00000611976 RASEFQ8IZ41 740 aa12.39□□□□□ -0.43
CDC42EP3-206ENST00000611976 SLC52A2Q9HAB3 445 aa12.39□□□□□ -0.43
CDC42EP3-206ENST00000611976 PUF60Q9UHX1 559 aaKnown RBP12.39□□□□□ -0.43
CDC42EP3-206ENST00000611976 RNF17Q9BXT8 1623 aaKnown RBP12.39□□□□□ -0.43
CDC42EP3-206ENST00000611976 E7EWF7 191 aa12.39□□□□□ -0.43
CDC42EP3-206ENST00000611976 EXOC5O00471 708 aa12.39□□□□□ -0.43
CDC42EP3-206ENST00000611976 DNA2P51530 1060 aa12.39□□□□□ -0.43
CDC42EP3-206ENST00000611976 STX17P56962 302 aa12.39□□□□□ -0.43
CDC42EP3-206ENST00000611976 KIF5AQ12840 1032 aa12.39□□□□□ -0.43
CDC42EP3-206ENST00000611976 SEPT7Q16181 437 aaKnown RBP12.39□□□□□ -0.43
CDC42EP3-206ENST00000611976 ENOX2Q16206 610 aaKnown RBP12.39□□□□□ -0.43
CDC42EP3-206ENST00000611976 VPS18Q9P253 973 aa12.39□□□□□ -0.43
CDC42EP3-206ENST00000611976 MRVI1Q9Y6F6 885 aa12.39□□□□□ -0.43
CDC42EP3-206ENST00000611976 MED14O60244 1454 aa12.38□□□□□ -0.43
CDC42EP3-206ENST00000611976 UBXN1Q04323 297 aa12.38□□□□□ -0.43
CDC42EP3-206ENST00000611976 MEX3CQ5U5Q3 659 aaKnown RBP12.38□□□□□ -0.43
CDC42EP3-206ENST00000611976 GIMAP7Q8NHV1 300 aa12.38□□□□□ -0.43
CDC42EP3-206ENST00000611976 EAF2Q96CJ1 260 aaPredicted RBP12.38□□□□□ -0.43
CDC42EP3-206ENST00000611976 ABCC3O15438 1527 aa12.38□□□□□ -0.43
CDC42EP3-206ENST00000611976 MAGEB6P1A0A0J9YX57 407 aa12.38□□□□□ -0.43
CDC42EP3-206ENST00000611976 RXRAP19793 462 aa12.38□□□□□ -0.43
CDC42EP3-206ENST00000611976 MAGEB6Q8N7X4 407 aa12.38□□□□□ -0.43
CDC42EP3-206ENST00000611976 RNF216Q9NWF9 866 aaPredicted RBP12.38□□□□□ -0.43
CDC42EP3-206ENST00000611976 ANKIB1Q9P2G1 1089 aa12.38□□□□□ -0.43
CDC42EP3-206ENST00000611976 IGSF1Q8N6C5 1336 aa12.38□□□□□ -0.43
CDC42EP3-206ENST00000611976 PCDH11XQ9BZA7 1347 aa12.38□□□□□ -0.43
CDC42EP3-206ENST00000611976 PCDH11YQ9BZA8 1340 aa12.38□□□□□ -0.43
CDC42EP3-206ENST00000611976 NEURL1BA8MQ27 555 aa12.38□□□□□ -0.43
CDC42EP3-206ENST00000611976 ZPR1O75312 459 aa12.38□□□□□ -0.43
CDC42EP3-206ENST00000611976 MATR3P43243 847 aaKnown RBP eCLIP12.38□□□□□ -0.43
CDC42EP3-206ENST00000611976 NBPF6Q5VWK0 638 aa12.38□□□□□ -0.43
CDC42EP3-206ENST00000611976 LRRC8AQ8IWT6 810 aa12.38□□□□□ -0.43
CDC42EP3-206ENST00000611976 NBPF4Q96M43 638 aa12.38□□□□□ -0.43
CDC42EP3-206ENST00000611976 KIAA1468Q9P260 1216 aa12.38□□□□□ -0.43
CDC42EP3-206ENST00000611976 MAPK8IP2Q13387 824 aaPredicted RBP12.38□□□□□ -0.43
CDC42EP3-206ENST00000611976 ZRSR2Q15696 482 aaKnown RBP12.38□□□□□ -0.43
CDC42EP3-206ENST00000611976 RNF187Q5TA31 235 aaPredicted RBP12.38□□□□□ -0.43
CDC42EP3-206ENST00000611976 IGSF22Q8N9C0 903 aa12.38□□□□□ -0.43
CDC42EP3-206ENST00000611976 LUC7L2Q9Y383 392 aaKnown RBP12.38□□□□□ -0.43
CDC42EP3-206ENST00000611976 MAATS1Q7Z4T9 603 aa12.37□□□□□ -0.43
CDC42EP3-206ENST00000611976 CARD6Q9BX69 1037 aa12.37□□□□□ -0.43
CDC42EP3-206ENST00000611976 XPO4Q9C0E2 1151 aaKnown RBP12.37□□□□□ -0.43
CDC42EP3-206ENST00000611976 RSPH14Q9UHP6 348 aa12.37□□□□□ -0.43
CDC42EP3-206ENST00000611976 E9PCH4 1651 aa12.37□□□□□ -0.43
CDC42EP3-206ENST00000611976 GCOM1H8Y6P7 765 aaPredicted RBP12.37□□□□□ -0.43
CDC42EP3-206ENST00000611976 GPAA1O43292 621 aa12.37□□□□□ -0.43
CDC42EP3-206ENST00000611976 GIGYF1O75420 1035 aaPredicted RBP12.37□□□□□ -0.43
CDC42EP3-206ENST00000611976 MYZAPP0CAP1 466 aa12.37□□□□□ -0.43
CDC42EP3-206ENST00000611976 GUCA1BQ9UMX6 200 aa12.37□□□□□ -0.43
CDC42EP3-206ENST00000611976 GSTO1P78417 241 aa12.37□□□□□ -0.43
CDC42EP3-206ENST00000611976 XAGE2Q96GT9 111 aa12.37□□□□□ -0.43
CDC42EP3-206ENST00000611976 PYCARDQ9ULZ3 195 aa12.37□□□□□ -0.43
CDC42EP3-206ENST00000611976 MPHOSPH10O00566 681 aaKnown RBP12.37□□□□□ -0.43
CDC42EP3-206ENST00000611976 MYSM1Q5VVJ2 828 aa12.37□□□□□ -0.43
CDC42EP3-206ENST00000611976 DYDC1Q8WWB3 177 aa12.37□□□□□ -0.43
CDC42EP3-206ENST00000611976 NAPGQ99747 312 aaPredicted RBP12.37□□□□□ -0.43
CDC42EP3-206ENST00000611976 ADCY9O60503 1353 aa12.36□□□□□ -0.43
CDC42EP3-206ENST00000611976 B4E1Z4 1266 aa12.36□□□□□ -0.43
CDC42EP3-206ENST00000611976 IRS4O14654 1257 aaPredicted RBP12.36□□□□□ -0.43
CDC42EP3-206ENST00000611976 NEFHP12036 1026 aa12.36□□□□□ -0.43
CDC42EP3-206ENST00000611976 CHMP4BP1P59074 171 aa12.36□□□□□ -0.43
CDC42EP3-206ENST00000611976 ASIC1P78348 528 aa12.36□□□□□ -0.43
CDC42EP3-206ENST00000611976 LRMPQ12912 555 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms