RNA–Protein interactions for RNA: ENST00000611575.4

CLK4-214, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-214ENST00000611575 HPS5Q9UPZ3 1129 aa9.26□□□□□ -0.93
CLK4-214ENST00000611575 MAPK8IP3Q9UPT6 1336 aa9.26□□□□□ -0.93
CLK4-214ENST00000611575 TAF1P21675 1872 aa9.25□□□□□ -0.93
CLK4-214ENST00000611575 PDE4DIPQ5VU43 2346 aa9.25□□□□□ -0.93
CLK4-214ENST00000611575 PTPREP23469 700 aa9.25□□□□□ -0.93
CLK4-214ENST00000611575 TM4SF4P48230 202 aa9.25□□□□□ -0.93
CLK4-214ENST00000611575 LMOD3Q0VAK6 560 aa9.25□□□□□ -0.93
CLK4-214ENST00000611575 AIMP1Q12904 312 aaKnown RBP9.25□□□□□ -0.93
CLK4-214ENST00000611575 RSBN1LQ6PCB5 846 aaPredicted RBP9.25□□□□□ -0.93
CLK4-214ENST00000611575 SULF1Q8IWU6 871 aa9.25□□□□□ -0.93
CLK4-214ENST00000611575 ZBTB38Q8NAP3 1195 aaPredicted RBP9.25□□□□□ -0.93
CLK4-214ENST00000611575 DBF4Q9UBU7 674 aaPredicted RBP9.25□□□□□ -0.93
CLK4-214ENST00000611575 ZNF646O15015 1829 aaPredicted RBP9.25□□□□□ -0.93
CLK4-214ENST00000611575 PSME4Q14997 1843 aa9.24□□□□□ -0.93
CLK4-214ENST00000611575 IRS4O14654 1257 aaPredicted RBP9.24□□□□□ -0.93
CLK4-214ENST00000611575 ZNF853P0CG23 659 aa9.24□□□□□ -0.93
CLK4-214ENST00000611575 SCARF1Q14162 830 aa9.24□□□□□ -0.93
CLK4-214ENST00000611575 SH3D19Q5HYK7 790 aa9.24□□□□□ -0.93
CLK4-214ENST00000611575 ANGEL2Q5VTE6 544 aaKnown RBP9.24□□□□□ -0.93
CLK4-214ENST00000611575 ZNF296Q8WUU4 475 aaPredicted RBP9.24□□□□□ -0.93
CLK4-214ENST00000611575 ZBED2Q9BTP6 218 aa9.24□□□□□ -0.93
CLK4-214ENST00000611575 SEC31BQ9NQW1 1179 aa9.24□□□□□ -0.93
CLK4-214ENST00000611575 ATP5J2-PTCD1G3V325 749 aa9.23□□□□□ -0.93
CLK4-214ENST00000611575 C6orf229H3BNL8 230 aa9.23□□□□□ -0.93
CLK4-214ENST00000611575 HDGFL1Q5TGJ6 251 aa9.23□□□□□ -0.93
CLK4-214ENST00000611575 PODNQ7Z5L7 613 aa9.23□□□□□ -0.93
CLK4-214ENST00000611575 ZBED3Q96IU2 234 aaPredicted RBP9.23□□□□□ -0.93
CLK4-214ENST00000611575 SLC4A5Q9BY07 1137 aa9.23□□□□□ -0.93
CLK4-214ENST00000611575 ZC3H12CQ9C0D7 883 aaKnown RBP9.23□□□□□ -0.93
CLK4-214ENST00000611575 MYOZ2Q9NPC6 264 aa9.23□□□□□ -0.93
CLK4-214ENST00000611575 HYPKQ9NX55 129 aa9.23□□□□□ -0.93
CLK4-214ENST00000611575 C3orf80F5H4A9 247 aa9.22□□□□□ -0.93
CLK4-214ENST00000611575 UFL1O94874 794 aa9.22□□□□□ -0.93
CLK4-214ENST00000611575 PCCAP05165 728 aaPredicted RBP9.22□□□□□ -0.93
CLK4-214ENST00000611575 USP17L8P0C7I0 530 aa9.22□□□□□ -0.93
CLK4-214ENST00000611575 DACT2Q5SW24 774 aa9.22□□□□□ -0.93
CLK4-214ENST00000611575 LDLRAD1Q5T700 205 aa9.22□□□□□ -0.93
CLK4-214ENST00000611575 MOB2Q70IA6 237 aa9.22□□□□□ -0.93
CLK4-214ENST00000611575 GGA1Q9UJY5 639 aa9.22□□□□□ -0.93
CLK4-214ENST00000611575 MED23Q9ULK4 1368 aa9.22□□□□□ -0.93
CLK4-214ENST00000611575 WTIPA6NIX2 430 aaPredicted RBP9.21□□□□□ -0.94
CLK4-214ENST00000611575 TRIM6-TRIM34B2RNG4 842 aa9.21□□□□□ -0.94
CLK4-214ENST00000611575 BHMG1C9JSJ3 638 aaPredicted RBP9.21□□□□□ -0.94
CLK4-214ENST00000611575 GPR25O00155 361 aa9.21□□□□□ -0.94
CLK4-214ENST00000611575 MMP14P50281 582 aa9.21□□□□□ -0.94
CLK4-214ENST00000611575 FBXO46Q6PJ61 603 aaPredicted RBP9.21□□□□□ -0.94
CLK4-214ENST00000611575 CCDC191Q8NCU4 936 aa9.21□□□□□ -0.94
CLK4-214ENST00000611575 PLA2G2EQ9NZK7 142 aa9.21□□□□□ -0.94
CLK4-214ENST00000611575 SZT2Q5T011 3432 aa9.21□□□□□ -0.94
CLK4-214ENST00000611575 XDHP47989 1333 aa9.21□□□□□ -0.94
CLK4-214ENST00000611575 LAMB1P07942 1786 aa9.2□□□□□ -0.94
CLK4-214ENST00000611575 USP17L3A6NCW0 530 aa9.2□□□□□ -0.94
CLK4-214ENST00000611575 USP17L4A6NCW7 530 aa9.2□□□□□ -0.94
CLK4-214ENST00000611575 RCCD1A6NED2 376 aa9.2□□□□□ -0.94
CLK4-214ENST00000611575 WNT10BO00744 389 aa9.2□□□□□ -0.94
CLK4-214ENST00000611575 PDE8AO60658 829 aa9.2□□□□□ -0.94
CLK4-214ENST00000611575 TBC1D8O95759 1140 aa9.2□□□□□ -0.94
CLK4-214ENST00000611575 RALBP1Q15311 655 aa9.2□□□□□ -0.94
CLK4-214ENST00000611575 MAP3K11Q16584 847 aa9.2□□□□□ -0.94
CLK4-214ENST00000611575 NBPF9Q3BBW0 867 aa9.2□□□□□ -0.94
CLK4-214ENST00000611575 DUSP27Q5VZP5 1158 aa9.2□□□□□ -0.94
CLK4-214ENST00000611575 USP17L1Q7RTZ2 530 aa9.2□□□□□ -0.94
CLK4-214ENST00000611575 ZNF428Q96B54 188 aa9.2□□□□□ -0.94
CLK4-214ENST00000611575 R3HDMLQ9H3Y0 253 aa9.2□□□□□ -0.94
CLK4-214ENST00000611575 IRS2Q9Y4H2 1338 aa9.2□□□□□ -0.94
CLK4-214ENST00000611575 COL1A1P02452 1464 aaPredicted RBP9.2□□□□□ -0.94
CLK4-214ENST00000611575 SSC5DA1L4H1 1573 aa9.2□□□□□ -0.94
CLK4-214ENST00000611575 UBE2Q2LH0YL09 131 aa9.19□□□□□ -0.94
CLK4-214ENST00000611575 HSP90B1P14625 803 aaKnown RBP9.19□□□□□ -0.94
CLK4-214ENST00000611575 ATP2B4P23634 1241 aa9.19□□□□□ -0.94
CLK4-214ENST00000611575 CCDC152Q4G0S7 254 aa9.19□□□□□ -0.94
CLK4-214ENST00000611575 RTL5Q5HYW3 569 aaPredicted RBP9.19□□□□□ -0.94
CLK4-214ENST00000611575 STRIP1Q5VSL9 837 aa9.19□□□□□ -0.94
CLK4-214ENST00000611575 NUDT18Q6ZVK8 323 aa9.19□□□□□ -0.94
CLK4-214ENST00000611575 RUNDC1Q96C34 613 aa9.19□□□□□ -0.94
CLK4-214ENST00000611575 PHAXQ9H814 394 aaKnown RBP9.19□□□□□ -0.94
CLK4-214ENST00000611575 MBIPQ9NS73 344 aa9.19□□□□□ -0.94
CLK4-214ENST00000611575 BSDC1Q9NW68 430 aaPredicted RBP9.19□□□□□ -0.94
CLK4-214ENST00000611575 MINPP1Q9UNW1 487 aa9.19□□□□□ -0.94
CLK4-214ENST00000611575 MYO3BQ8WXR4 1341 aa9.19□□□□□ -0.94
CLK4-214ENST00000611575 RANBP2P49792 3224 aaKnown RBP9.19□□□□□ -0.94
CLK4-214ENST00000611575 UNCXA6NJT0 531 aa9.18□□□□□ -0.94
CLK4-214ENST00000611575 IGKV5-2P06315 115 aa9.18□□□□□ -0.94
CLK4-214ENST00000611575 POLR2AP24928 1970 aaKnown RBP9.18□□□□□ -0.94
CLK4-214ENST00000611575 PTPN5P54829 565 aa9.18□□□□□ -0.94
CLK4-214ENST00000611575 SKIV2LQ15477 1246 aaKnown RBP9.18□□□□□ -0.94
CLK4-214ENST00000611575 SPRYD7Q5W111 196 aa9.18□□□□□ -0.94
CLK4-214ENST00000611575 TTLL11Q8NHH1 800 aa9.18□□□□□ -0.94
CLK4-214ENST00000611575 TATDN2Q93075 761 aa9.18□□□□□ -0.94
CLK4-214ENST00000611575 PCMTD1Q96MG8 357 aaPredicted RBP9.18□□□□□ -0.94
CLK4-214ENST00000611575 METTL22Q9BUU2 404 aaPredicted RBP9.18□□□□□ -0.94
CLK4-214ENST00000611575 ANKIB1Q9P2G1 1089 aa9.18□□□□□ -0.94
CLK4-214ENST00000611575 SCAF8Q9UPN6 1271 aaKnown RBP9.18□□□□□ -0.94
CLK4-214ENST00000611575 AKAP11Q9UKA4 1901 aa9.17□□□□□ -0.94
CLK4-214ENST00000611575 CTSWP56202 376 aa9.17□□□□□ -0.94
CLK4-214ENST00000611575 PTPN12Q05209 780 aaKnown RBP9.17□□□□□ -0.94
CLK4-214ENST00000611575 SREBF2Q12772 1141 aa9.17□□□□□ -0.94
CLK4-214ENST00000611575 PROX2Q3B8N5 592 aa9.17□□□□□ -0.94
CLK4-214ENST00000611575 PRAMEF18Q5VWM3 479 aa9.17□□□□□ -0.94
CLK4-214ENST00000611575 TXNRD3Q86VQ6 643 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms