RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 CFAP100Q494V2 611 aa12.89□□□□□ -0.35
LINC01001-203ENST00000607448 PRMT6Q96LA8 375 aaPredicted RBP12.89□□□□□ -0.35
LINC01001-203ENST00000607448 WBP1LQ9NX94 342 aa12.89□□□□□ -0.35
LINC01001-203ENST00000607448 HDAC9Q9UKV0 1011 aa12.89□□□□□ -0.35
LINC01001-203ENST00000607448 OTOFQ9HC10 1997 aa12.89□□□□□ -0.35
LINC01001-203ENST00000607448 PNMA6EA0A0J9YXQ4 647 aa12.88□□□□□ -0.35
LINC01001-203ENST00000607448 SRGAP3O43295 1099 aa12.88□□□□□ -0.35
LINC01001-203ENST00000607448 CHAF1AQ13111 956 aaPredicted RBP12.88□□□□□ -0.35
LINC01001-203ENST00000607448 VPS37DQ86XT2 251 aa12.88□□□□□ -0.35
LINC01001-203ENST00000607448 COPRSQ9NQ92 184 aa12.88□□□□□ -0.35
LINC01001-203ENST00000607448 SSC5DA1L4H1 1573 aa12.88□□□□□ -0.35
LINC01001-203ENST00000607448 CLRN2A0PK11 232 aa12.87□□□□□ -0.35
LINC01001-203ENST00000607448 CIAO1O76071 339 aa12.87□□□□□ -0.35
LINC01001-203ENST00000607448 MTX1Q13505 466 aa12.87□□□□□ -0.35
LINC01001-203ENST00000607448 DLGAP5Q15398 846 aa12.87□□□□□ -0.35
LINC01001-203ENST00000607448 CAVIN4Q5BKX8 364 aa12.87□□□□□ -0.35
LINC01001-203ENST00000607448 CHD1LQ86WJ1 897 aa12.87□□□□□ -0.35
LINC01001-203ENST00000607448 HHIPL1Q96JK4 782 aa12.87□□□□□ -0.35
LINC01001-203ENST00000607448 C22orf23Q9BZE7 217 aa12.87□□□□□ -0.35
LINC01001-203ENST00000607448 C1orf115Q9H7X2 142 aa12.87□□□□□ -0.35
LINC01001-203ENST00000607448 TTF2Q9UNY4 1162 aaKnown RBP12.87□□□□□ -0.35
LINC01001-203ENST00000607448 FZD1Q9UP38 647 aa12.87□□□□□ -0.35
LINC01001-203ENST00000607448 AKAP11Q9UKA4 1901 aa12.87□□□□□ -0.35
LINC01001-203ENST00000607448 SPDYE2BA6NHP3 402 aa12.86□□□□□ -0.35
LINC01001-203ENST00000607448 FAM155AB1AL88 458 aaPredicted RBP12.86□□□□□ -0.35
LINC01001-203ENST00000607448 SPDYE6P0CI01 402 aa12.86□□□□□ -0.35
LINC01001-203ENST00000607448 ECE1P42892 770 aa12.86□□□□□ -0.35
LINC01001-203ENST00000607448 C2orf69Q8N8R5 385 aa12.86□□□□□ -0.35
LINC01001-203ENST00000607448 MTMR14Q8NCE2 650 aa12.86□□□□□ -0.35
LINC01001-203ENST00000607448 LPIN2Q92539 896 aa12.86□□□□□ -0.35
LINC01001-203ENST00000607448 GNAI2P04899 355 aa12.86□□□□□ -0.35
LINC01001-203ENST00000607448 IFIT1P09914 478 aaKnown RBP12.86□□□□□ -0.35
LINC01001-203ENST00000607448 SLC5A1P13866 664 aa12.86□□□□□ -0.35
LINC01001-203ENST00000607448 ADORA1P30542 326 aa12.86□□□□□ -0.35
LINC01001-203ENST00000607448 IL15P40933 162 aaPredicted RBP12.86□□□□□ -0.35
LINC01001-203ENST00000607448 MMP14P50281 582 aa12.86□□□□□ -0.35
LINC01001-203ENST00000607448 ATP2B3Q16720 1220 aa12.86□□□□□ -0.35
LINC01001-203ENST00000607448 BMP2KLQ5H9B9 411 aa12.86□□□□□ -0.35
LINC01001-203ENST00000607448 RGMBQ6NW40 437 aa12.86□□□□□ -0.35
LINC01001-203ENST00000607448 TBC1D2Q9BYX2 928 aa12.86□□□□□ -0.35
LINC01001-203ENST00000607448 FBXO3Q9UK99 471 aa12.86□□□□□ -0.35
LINC01001-203ENST00000607448 MYO5AQ9Y4I1 1855 aaKnown RBP12.85□□□□□ -0.35
LINC01001-203ENST00000607448 MYH2Q9UKX2 1941 aa12.85□□□□□ -0.35
LINC01001-203ENST00000607448 LAMB1P07942 1786 aa12.85□□□□□ -0.35
LINC01001-203ENST00000607448 FRAT2O75474 233 aaPredicted RBP12.85□□□□□ -0.35
LINC01001-203ENST00000607448 RBM5P52756 815 aaKnown RBP eCLIP12.85□□□□□ -0.35
LINC01001-203ENST00000607448 TFCP2Q12800 502 aa12.85□□□□□ -0.35
LINC01001-203ENST00000607448 ANTXR1Q9H6X2 564 aa12.85□□□□□ -0.35
LINC01001-203ENST00000607448 CEP126Q9P2H0 1117 aa12.85□□□□□ -0.35
LINC01001-203ENST00000607448 TSKSQ9UJT2 592 aa12.85□□□□□ -0.35
LINC01001-203ENST00000607448 HDAC5Q9UQL6 1122 aa12.85□□□□□ -0.35
LINC01001-203ENST00000607448 PHKA1P46020 1223 aa12.84□□□□□ -0.35
LINC01001-203ENST00000607448 PRKG1Q13976 671 aa12.84□□□□□ -0.35
LINC01001-203ENST00000607448 APOBEC3FQ8IUX4 373 aaKnown RBP12.84□□□□□ -0.35
LINC01001-203ENST00000607448 DEFB129Q9H1M3 183 aa12.84□□□□□ -0.35
LINC01001-203ENST00000607448 VEZTQ9HBM0 779 aa12.84□□□□□ -0.35
LINC01001-203ENST00000607448 CASP8AP2Q9UKL3 1982 aa12.84□□□□□ -0.35
LINC01001-203ENST00000607448 UBE2Q2LH0YL09 131 aa12.83□□□□□ -0.36
LINC01001-203ENST00000607448 HSPA8P11142 646 aaKnown RBP12.83□□□□□ -0.36
LINC01001-203ENST00000607448 MAP2K2P36507 400 aa12.83□□□□□ -0.36
LINC01001-203ENST00000607448 CRKP46108 304 aa12.83□□□□□ -0.36
LINC01001-203ENST00000607448 RBM25P49756 843 aaKnown RBP12.83□□□□□ -0.36
LINC01001-203ENST00000607448 ZNF157P51786 506 aaPredicted RBP12.83□□□□□ -0.36
LINC01001-203ENST00000607448 LBX1P52954 281 aa12.83□□□□□ -0.36
LINC01001-203ENST00000607448 MFAP1P55081 439 aaKnown RBP12.83□□□□□ -0.36
LINC01001-203ENST00000607448 TIMM10P62072 90 aa12.83□□□□□ -0.36
LINC01001-203ENST00000607448 MAP2K1Q02750 393 aaPredicted RBP12.83□□□□□ -0.36
LINC01001-203ENST00000607448 CDAN1Q8IWY9 1227 aa12.83□□□□□ -0.36
LINC01001-203ENST00000607448 TDRD3Q9H7E2 651 aaKnown RBP12.83□□□□□ -0.36
LINC01001-203ENST00000607448 SERPINA10Q9UK55 444 aa12.83□□□□□ -0.36
LINC01001-203ENST00000607448 SLC10A3P09131 477 aa12.82□□□□□ -0.36
LINC01001-203ENST00000607448 RASAL3Q86YV0 1011 aa12.82□□□□□ -0.36
LINC01001-203ENST00000607448 AIDAQ96BJ3 306 aa12.82□□□□□ -0.36
LINC01001-203ENST00000607448 ZNF70Q9UC06 446 aaPredicted RBP12.82□□□□□ -0.36
LINC01001-203ENST00000607448 A0A1B0GUL7 405 aa12.81□□□□□ -0.36
LINC01001-203ENST00000607448 MYO1BO43795 1136 aa12.81□□□□□ -0.36
LINC01001-203ENST00000607448 CACNB3P54284 484 aa12.81□□□□□ -0.36
LINC01001-203ENST00000607448 FKBP1BP68106 108 aa12.81□□□□□ -0.36
LINC01001-203ENST00000607448 NOGQ13253 232 aa12.81□□□□□ -0.36
LINC01001-203ENST00000607448 POLA2Q14181 598 aa12.81□□□□□ -0.36
LINC01001-203ENST00000607448 SPDYE2Q495Y8 402 aa12.81□□□□□ -0.36
LINC01001-203ENST00000607448 CCDC102BQ68D86 513 aa12.81□□□□□ -0.36
LINC01001-203ENST00000607448 TBC1D22AQ8WUA7 517 aa12.81□□□□□ -0.36
LINC01001-203ENST00000607448 SNX21Q969T3 373 aa12.81□□□□□ -0.36
LINC01001-203ENST00000607448 LNPKQ9C0E8 428 aa12.81□□□□□ -0.36
LINC01001-203ENST00000607448 AK9Q5TCS8 1911 aa12.81□□□□□ -0.36
LINC01001-203ENST00000607448 PRDX5P30044 214 aa12.81□□□□□ -0.36
LINC01001-203ENST00000607448 CTCFP49711 727 aaPredicted RBP12.81□□□□□ -0.36
LINC01001-203ENST00000607448 KIF23Q02241 960 aaPredicted RBP12.81□□□□□ -0.36
LINC01001-203ENST00000607448 TTLL12Q14166 644 aaPredicted RBP12.81□□□□□ -0.36
LINC01001-203ENST00000607448 NBPF12Q5TAG4 269 aaPredicted RBP12.81□□□□□ -0.36
LINC01001-203ENST00000607448 ANKRD45Q5TZF3 282 aa12.81□□□□□ -0.36
LINC01001-203ENST00000607448 HSCBQ8IWL3 235 aa12.81□□□□□ -0.36
LINC01001-203ENST00000607448 SSH3Q8TE77 659 aa12.81□□□□□ -0.36
LINC01001-203ENST00000607448 XAGE2Q96GT9 111 aa12.81□□□□□ -0.36
LINC01001-203ENST00000607448 CHMP5Q9NZZ3 219 aa12.81□□□□□ -0.36
LINC01001-203ENST00000607448 TCP10L2B9ZVM9 353 aa12.8□□□□□ -0.36
LINC01001-203ENST00000607448 ATP8B2P98198 1209 aa12.8□□□□□ -0.36
LINC01001-203ENST00000607448 RASGRF1Q13972 1273 aa12.8□□□□□ -0.36
LINC01001-203ENST00000607448 RASA3Q14644 834 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms