RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 ZSCAN25Q6NSZ9 544 aa24.73■■□□□ 1.55
PNKP-215ENST00000600910 MAGEB6Q8N7X4 407 aa24.73■■□□□ 1.55
PNKP-215ENST00000600910 ZNF384Q8TF68 577 aa24.73■■□□□ 1.55
PNKP-215ENST00000600910 TTF2Q9UNY4 1162 aaKnown RBP24.73■■□□□ 1.55
PNKP-215ENST00000600910 MAST2Q6P0Q8 1798 aa24.73■■□□□ 1.55
PNKP-215ENST00000600910 PDE6AP16499 860 aa24.72■■□□□ 1.55
PNKP-215ENST00000600910 ADD2P35612 726 aa24.72■■□□□ 1.55
PNKP-215ENST00000600910 SLFNL1Q499Z3 407 aa24.72■■□□□ 1.55
PNKP-215ENST00000600910 AGBL3Q8NEM8 1001 aa24.72■■□□□ 1.55
PNKP-215ENST00000600910 GMLQ99445 158 aa24.72■■□□□ 1.55
PNKP-215ENST00000600910 RNF113AO15541 343 aaKnown RBP24.72■■□□□ 1.55
PNKP-215ENST00000600910 IGSF3O75054 1194 aa24.72■■□□□ 1.55
PNKP-215ENST00000600910 ZFYP08048 801 aaPredicted RBP24.72■■□□□ 1.55
PNKP-215ENST00000600910 NAA16Q6N069 864 aaPredicted RBP24.72■■□□□ 1.55
PNKP-215ENST00000600910 TICAM2Q86XR7 235 aa24.72■■□□□ 1.55
PNKP-215ENST00000600910 GPC2Q8N158 579 aa24.72■■□□□ 1.55
PNKP-215ENST00000600910 ZC3H4Q9UPT8 1303 aaKnown RBP24.71■■□□□ 1.55
PNKP-215ENST00000600910 CDC45O75419 566 aa24.71■■□□□ 1.55
PNKP-215ENST00000600910 ZNF532Q9HCE3 1301 aa24.7■■□□□ 1.55
PNKP-215ENST00000600910 TCRBV5S4A2TA0A5A2 114 aa24.7■■□□□ 1.54
PNKP-215ENST00000600910 HIP1O00291 1037 aa24.7■■□□□ 1.54
PNKP-215ENST00000600910 CHMLP26374 656 aa24.7■■□□□ 1.54
PNKP-215ENST00000600910 UBE3CQ15386 1083 aa24.7■■□□□ 1.54
PNKP-215ENST00000600910 DIXDC1Q155Q3 683 aa24.7■■□□□ 1.54
PNKP-215ENST00000600910 DIAPH3Q9NSV4 1193 aa24.7■■□□□ 1.54
PNKP-215ENST00000600910 MAST3O60307 1309 aa24.7■■□□□ 1.54
PNKP-215ENST00000600910 CYP7A1P22680 504 aa24.69■■□□□ 1.54
PNKP-215ENST00000600910 RPS12P25398 132 aaKnown RBP24.69■■□□□ 1.54
PNKP-215ENST00000600910 SCNN1DP51172 638 aa24.69■■□□□ 1.54
PNKP-215ENST00000600910 DDNO94850 711 aaPredicted RBP24.68■■□□□ 1.54
PNKP-215ENST00000600910 GMPSP49915 693 aaPredicted RBP24.68■■□□□ 1.54
PNKP-215ENST00000600910 GSTO1P78417 241 aa24.68■■□□□ 1.54
PNKP-215ENST00000600910 ADGRA1Q86SQ6 560 aa24.68■■□□□ 1.54
PNKP-215ENST00000600910 FAM227BQ96M60 508 aa24.68■■□□□ 1.54
PNKP-215ENST00000600910 NMIQ13287 307 aaPredicted RBP24.68■■□□□ 1.54
PNKP-215ENST00000600910 TMED8Q6PL24 325 aaPredicted RBP24.68■■□□□ 1.54
PNKP-215ENST00000600910 CWC27Q6UX04 472 aaKnown RBP24.68■■□□□ 1.54
PNKP-215ENST00000600910 USP17L8P0C7I0 530 aa24.67■■□□□ 1.54
PNKP-215ENST00000600910 ZMYM1Q5SVZ6 1142 aa24.67■■□□□ 1.54
PNKP-215ENST00000600910 DPY19L2Q6NUT2 758 aa24.67■■□□□ 1.54
PNKP-215ENST00000600910 APPBP2Q92624 585 aa24.67■■□□□ 1.54
PNKP-215ENST00000600910 MYH2Q9UKX2 1941 aa24.66■■□□□ 1.54
PNKP-215ENST00000600910 A0A0D9SFI3 127 aa24.66■■□□□ 1.54
PNKP-215ENST00000600910 CASC1Q6TDU7 716 aa24.66■■□□□ 1.54
PNKP-215ENST00000600910 SLF2Q8IX21 1173 aa24.66■■□□□ 1.54
PNKP-215ENST00000600910 OGFOD1Q8N543 542 aa24.66■■□□□ 1.54
PNKP-215ENST00000600910 DPF2Q92785 391 aa24.66■■□□□ 1.54
PNKP-215ENST00000600910 OSBP2Q969R2 916 aa24.66■■□□□ 1.54
PNKP-215ENST00000600910 SEC62Q99442 399 aaKnown RBP24.66■■□□□ 1.54
PNKP-215ENST00000600910 HDAC9Q9UKV0 1011 aa24.66■■□□□ 1.54
PNKP-215ENST00000600910 LDHCP07864 332 aa24.65■■□□□ 1.54
PNKP-215ENST00000600910 TEKT1Q969V4 418 aa24.65■■□□□ 1.54
PNKP-215ENST00000600910 PUS7LQ9H0K6 701 aaKnown RBP24.65■■□□□ 1.54
PNKP-215ENST00000600910 MROH7-TTC4A0A0A0MT08 1334 aa24.65■■□□□ 1.54
PNKP-215ENST00000600910 ADAMTSL1Q8N6G6 1762 aa24.65■■□□□ 1.54
PNKP-215ENST00000600910 SHTN1A0MZ66 631 aa24.64■■□□□ 1.54
PNKP-215ENST00000600910 CRKP46108 304 aa24.64■■□□□ 1.54
PNKP-215ENST00000600910 HDLBPQ00341 1268 aaKnown RBP24.64■■□□□ 1.54
PNKP-215ENST00000600910 FAM163AQ96GL9 167 aaPredicted RBP24.64■■□□□ 1.54
PNKP-215ENST00000600910 MRIQ9BWK5 157 aa24.64■■□□□ 1.54
PNKP-215ENST00000600910 SERPINA10Q9UK55 444 aa24.64■■□□□ 1.54
PNKP-215ENST00000600910 HHIPL2Q6UWX4 724 aa24.64■■□□□ 1.53
PNKP-215ENST00000600910 MIGA1Q8NAN2 632 aa24.64■■□□□ 1.53
PNKP-215ENST00000600910 HELLSQ9NRZ9 838 aa24.64■■□□□ 1.53
PNKP-215ENST00000600910 CNOT7Q9UIV1 285 aaKnown RBP24.64■■□□□ 1.53
PNKP-215ENST00000600910 DAGLAQ9Y4D2 1042 aa24.64■■□□□ 1.53
PNKP-215ENST00000600910 GAKO14976 1311 aa24.64■■□□□ 1.53
PNKP-215ENST00000600910 GLTPD2A6NH11 291 aa24.63■■□□□ 1.53
PNKP-215ENST00000600910 M0R2C6 588 aa24.63■■□□□ 1.53
PNKP-215ENST00000600910 RBM5P52756 815 aaKnown RBP eCLIP24.63■■□□□ 1.53
PNKP-215ENST00000600910 MICALL2Q8IY33 904 aa24.63■■□□□ 1.53
PNKP-215ENST00000600910 RUFY2Q8WXA3 655 aa24.63■■□□□ 1.53
PNKP-215ENST00000600910 IL25Q9H293 177 aa24.63■■□□□ 1.53
PNKP-215ENST00000600910 MCMDC2Q4G0Z9 681 aa24.62■■□□□ 1.53
PNKP-215ENST00000600910 AATFQ9NY61 560 aaKnown RBP eCLIP24.62■■□□□ 1.53
PNKP-215ENST00000600910 GPRC5DQ9NZD1 345 aa24.62■■□□□ 1.53
PNKP-215ENST00000600910 PCDHAC2Q9Y5I4 1007 aa24.62■■□□□ 1.53
PNKP-215ENST00000600910 ZNF280AP59817 542 aaPredicted RBP24.61■■□□□ 1.53
PNKP-215ENST00000600910 CFAP100Q494V2 611 aa24.61■■□□□ 1.53
PNKP-215ENST00000600910 C8orf34Q49A92 452 aa24.61■■□□□ 1.53
PNKP-215ENST00000600910 ZDHHC15Q96MV8 337 aa24.61■■□□□ 1.53
PNKP-215ENST00000600910 ESYT1Q9BSJ8 1104 aa24.61■■□□□ 1.53
PNKP-215ENST00000600910 GPR75-ASB3A0A0A6YYF3 556 aa24.61■■□□□ 1.53
PNKP-215ENST00000600910 MAGEB6P1A0A0J9YX57 407 aa24.61■■□□□ 1.53
PNKP-215ENST00000600910 BTDP43251 543 aa24.61■■□□□ 1.53
PNKP-215ENST00000600910 MMP14P50281 582 aa24.61■■□□□ 1.53
PNKP-215ENST00000600910 CCDC129Q6ZRS4 1044 aa24.61■■□□□ 1.53
PNKP-215ENST00000600910 AIDAQ96BJ3 306 aa24.61■■□□□ 1.53
PNKP-215ENST00000600910 RAD50Q92878 1312 aa24.6■■□□□ 1.53
PNKP-215ENST00000600910 MBD4O95243 580 aa24.6■■□□□ 1.53
PNKP-215ENST00000600910 DYNLL1P63167 89 aaKnown RBP24.6■■□□□ 1.53
PNKP-215ENST00000600910 ZNF589Q86UQ0 364 aaPredicted RBP24.6■■□□□ 1.53
PNKP-215ENST00000600910 RIOK1Q9BRS2 568 aaKnown RBP24.6■■□□□ 1.53
PNKP-215ENST00000600910 NOL10Q9BSC4 688 aaKnown RBP24.6■■□□□ 1.53
PNKP-215ENST00000600910 MYOZ2Q9NPC6 264 aa24.6■■□□□ 1.53
PNKP-215ENST00000600910 H7C1D1 291 aa24.59■■□□□ 1.53
PNKP-215ENST00000600910 SGSM2O43147 1006 aa24.59■■□□□ 1.53
PNKP-215ENST00000600910 GPAA1O43292 621 aa24.59■■□□□ 1.53
PNKP-215ENST00000600910 BAG3O95817 575 aa24.59■■□□□ 1.53
PNKP-215ENST00000600910 APOBEC3HQ6NTF7 200 aaKnown RBP24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms