RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 CSF1RP07333 972 aa12.71□□□□□ -0.37
HIF3A-219ENST00000600879 IL1R1P14778 569 aa12.71□□□□□ -0.37
HIF3A-219ENST00000600879 GTF2A2P52657 109 aa12.71□□□□□ -0.37
HIF3A-219ENST00000600879 ARHGEF6Q15052 776 aa12.71□□□□□ -0.37
HIF3A-219ENST00000600879 SPDYE2Q495Y8 402 aa12.71□□□□□ -0.37
HIF3A-219ENST00000600879 PLA2G12BQ9BX93 195 aa12.71□□□□□ -0.37
HIF3A-219ENST00000600879 PRO3102Q9H379 93 aa12.71□□□□□ -0.37
HIF3A-219ENST00000600879 TTF2Q9UNY4 1162 aaKnown RBP12.71□□□□□ -0.37
HIF3A-219ENST00000600879 TLR2O60603 784 aa12.7□□□□□ -0.38
HIF3A-219ENST00000600879 SLC4A2P04920 1241 aa12.7□□□□□ -0.38
HIF3A-219ENST00000600879 CCL5P13501 91 aa12.7□□□□□ -0.38
HIF3A-219ENST00000600879 MAP3K9P80192 1104 aa12.7□□□□□ -0.38
HIF3A-219ENST00000600879 TNFAIP1Q13829 316 aa12.7□□□□□ -0.38
HIF3A-219ENST00000600879 KIF22Q14807 665 aa12.7□□□□□ -0.38
HIF3A-219ENST00000600879 GRIK5Q16478 980 aa12.7□□□□□ -0.38
HIF3A-219ENST00000600879 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.7□□□□□ -0.38
HIF3A-219ENST00000600879 ZKSCAN4Q969J2 545 aaPredicted RBP12.7□□□□□ -0.38
HIF3A-219ENST00000600879 ZNF594Q96JF6 807 aaPredicted RBP12.7□□□□□ -0.38
HIF3A-219ENST00000600879 TRIM47Q96LD4 638 aa12.7□□□□□ -0.38
HIF3A-219ENST00000600879 CSADQ9Y600 493 aa12.7□□□□□ -0.38
HIF3A-219ENST00000600879 SNCAIPQ9Y6H5 919 aa12.7□□□□□ -0.38
HIF3A-219ENST00000600879 A0A0C4DFX4 3053 aa12.69□□□□□ -0.38
HIF3A-219ENST00000600879 PSMC4P43686 418 aa12.69□□□□□ -0.38
HIF3A-219ENST00000600879 FKBP1AP62942 108 aaKnown RBP12.69□□□□□ -0.38
HIF3A-219ENST00000600879 IFIT5Q13325 482 aaKnown RBP12.69□□□□□ -0.38
HIF3A-219ENST00000600879 MFSD14BQ5SR56 506 aa12.69□□□□□ -0.38
HIF3A-219ENST00000600879 C15orf52Q6ZUT6 534 aaKnown RBP12.69□□□□□ -0.38
HIF3A-219ENST00000600879 MYH16Q9H6N6 1097 aa12.69□□□□□ -0.38
HIF3A-219ENST00000600879 BIN2Q9UBW5 565 aaPredicted RBP12.69□□□□□ -0.38
HIF3A-219ENST00000600879 STAP2Q9UGK3 403 aa12.69□□□□□ -0.38
HIF3A-219ENST00000600879 IRF6O14896 467 aa12.68□□□□□ -0.38
HIF3A-219ENST00000600879 ZBTB7BO15156 539 aaPredicted RBP12.68□□□□□ -0.38
HIF3A-219ENST00000600879 OSBPP22059 807 aa12.68□□□□□ -0.38
HIF3A-219ENST00000600879 GYG1P46976 350 aa12.68□□□□□ -0.38
HIF3A-219ENST00000600879 FKBP5Q13451 457 aaPredicted RBP12.68□□□□□ -0.38
HIF3A-219ENST00000600879 UBE2Q1Q7Z7E8 422 aa12.68□□□□□ -0.38
HIF3A-219ENST00000600879 DZIP1LQ8IYY4 767 aaKnown RBP12.68□□□□□ -0.38
HIF3A-219ENST00000600879 RAET1EQ8TD07 263 aa12.68□□□□□ -0.38
HIF3A-219ENST00000600879 CHMP4AQ9BY43 222 aa12.68□□□□□ -0.38
HIF3A-219ENST00000600879 RNF208Q9H0X6 261 aa12.68□□□□□ -0.38
HIF3A-219ENST00000600879 RIPOR2Q9Y4F9 1068 aa12.68□□□□□ -0.38
HIF3A-219ENST00000600879 A0A1B0GUL6 1792 aa12.68□□□□□ -0.38
HIF3A-219ENST00000600879 SPDYE5A6NIY4 337 aa12.67□□□□□ -0.38
HIF3A-219ENST00000600879 FMNL1O95466 1100 aaPredicted RBP12.67□□□□□ -0.38
HIF3A-219ENST00000600879 CETPP11597 493 aa12.67□□□□□ -0.38
HIF3A-219ENST00000600879 GRK4P32298 578 aa12.67□□□□□ -0.38
HIF3A-219ENST00000600879 CRKP46108 304 aa12.67□□□□□ -0.38
HIF3A-219ENST00000600879 GJA8P48165 433 aa12.67□□□□□ -0.38
HIF3A-219ENST00000600879 FOXO4P98177 505 aa12.67□□□□□ -0.38
HIF3A-219ENST00000600879 FLIIQ13045 1269 aa12.67□□□□□ -0.38
HIF3A-219ENST00000600879 TWISTNBQ3B726 338 aaPredicted RBP12.67□□□□□ -0.38
HIF3A-219ENST00000600879 TAF7LQ5H9L4 462 aa12.67□□□□□ -0.38
HIF3A-219ENST00000600879 Q7L0L9 218 aa12.67□□□□□ -0.38
HIF3A-219ENST00000600879 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.67□□□□□ -0.38
HIF3A-219ENST00000600879 DNAAF4Q8WXU2 420 aa12.67□□□□□ -0.38
HIF3A-219ENST00000600879 WRNIP1Q96S55 665 aa12.67□□□□□ -0.38
HIF3A-219ENST00000600879 UNC93B1Q9H1C4 597 aa12.67□□□□□ -0.38
HIF3A-219ENST00000600879 CNNM1Q9NRU3 951 aa12.67□□□□□ -0.38
HIF3A-219ENST00000600879 SRRDQ9UH36 339 aa12.67□□□□□ -0.38
HIF3A-219ENST00000600879 SERPINA10Q9UK55 444 aa12.67□□□□□ -0.38
HIF3A-219ENST00000600879 IQSEC3Q9UPP2 1182 aaPredicted RBP12.67□□□□□ -0.38
HIF3A-219ENST00000600879 LAMA3Q16787 3333 aa12.67□□□□□ -0.38
HIF3A-219ENST00000600879 WDHD1O75717 1129 aaPredicted RBP12.66□□□□□ -0.38
HIF3A-219ENST00000600879 FARP2O94887 1054 aaPredicted RBP12.66□□□□□ -0.38
HIF3A-219ENST00000600879 TNNI2P48788 182 aa12.66□□□□□ -0.38
HIF3A-219ENST00000600879 PRKCZQ05513 592 aa12.66□□□□□ -0.38
HIF3A-219ENST00000600879 EPHA10Q5JZY3 1008 aa12.66□□□□□ -0.38
HIF3A-219ENST00000600879 LMBR1LQ6UX01 489 aa12.66□□□□□ -0.38
HIF3A-219ENST00000600879 LDHAL6AQ6ZMR3 332 aa12.66□□□□□ -0.38
HIF3A-219ENST00000600879 LINS1Q8NG48 757 aa12.66□□□□□ -0.38
HIF3A-219ENST00000600879 HTATIP2Q9BUP3 242 aa12.66□□□□□ -0.38
HIF3A-219ENST00000600879 FAM205AQ6ZU69 1335 aa12.65□□□□□ -0.38
HIF3A-219ENST00000600879 MYPNQ86TC9 1320 aa12.65□□□□□ -0.38
HIF3A-219ENST00000600879 F6X3S4 739 aa12.65□□□□□ -0.38
HIF3A-219ENST00000600879 GJB1P08034 283 aa12.65□□□□□ -0.38
HIF3A-219ENST00000600879 CHAF1AQ13111 956 aaPredicted RBP12.65□□□□□ -0.38
HIF3A-219ENST00000600879 SNAPC2Q13487 334 aa12.65□□□□□ -0.38
HIF3A-219ENST00000600879 C17orf99Q6UX52 265 aa12.65□□□□□ -0.38
HIF3A-219ENST00000600879 MIGA2Q7L4E1 593 aa12.65□□□□□ -0.38
HIF3A-219ENST00000600879 TDRD7Q8NHU6 1098 aaKnown RBP12.65□□□□□ -0.38
HIF3A-219ENST00000600879 U2AF1L4Q8WU68 220 aaKnown RBP12.65□□□□□ -0.38
HIF3A-219ENST00000600879 GABRQQ9UN88 632 aa12.65□□□□□ -0.38
HIF3A-219ENST00000600879 NR2E3Q9Y5X4 410 aa12.65□□□□□ -0.38
HIF3A-219ENST00000600879 PDHXO00330 501 aa12.64□□□□□ -0.39
HIF3A-219ENST00000600879 EVI5O60447 810 aa12.64□□□□□ -0.39
HIF3A-219ENST00000600879 ELNP15502 786 aa12.64□□□□□ -0.39
HIF3A-219ENST00000600879 HIBADHP31937 336 aaKnown RBP12.64□□□□□ -0.39
HIF3A-219ENST00000600879 CCDC57Q2TAC2 916 aa12.64□□□□□ -0.39
HIF3A-219ENST00000600879 ERO1BQ86YB8 467 aa12.64□□□□□ -0.39
HIF3A-219ENST00000600879 ARAP2Q8WZ64 1704 aa12.64□□□□□ -0.39
HIF3A-219ENST00000600879 CYP2C8P10632 490 aa12.63□□□□□ -0.39
HIF3A-219ENST00000600879 INPP5BP32019 993 aa12.63□□□□□ -0.39
HIF3A-219ENST00000600879 NKX2-3Q8TAU0 364 aa12.63□□□□□ -0.39
HIF3A-219ENST00000600879 FAM84BQ96KN1 310 aaPredicted RBP12.63□□□□□ -0.39
HIF3A-219ENST00000600879 PUS3Q9BZE2 481 aaKnown RBP12.63□□□□□ -0.39
HIF3A-219ENST00000600879 GNRH1P01148 92 aa12.62□□□□□ -0.39
HIF3A-219ENST00000600879 PRMT2P55345 433 aa12.62□□□□□ -0.39
HIF3A-219ENST00000600879 PPIL2Q13356 520 aa12.62□□□□□ -0.39
HIF3A-219ENST00000600879 DIEXFQ68CQ4 756 aaKnown RBP12.62□□□□□ -0.39
HIF3A-219ENST00000600879 DEFB123Q8N688 67 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms