RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 ZNF70Q9UC06 446 aaPredicted RBP22.76■■□□□ 1.23
SSBP4-207ENST00000600244 CSADQ9Y600 493 aa22.76■■□□□ 1.23
SSBP4-207ENST00000600244 IL1R1P14778 569 aa22.75■■□□□ 1.23
SSBP4-207ENST00000600244 LRIT3Q3SXY7 679 aa22.75■■□□□ 1.23
SSBP4-207ENST00000600244 CPA4Q9UI42 421 aa22.75■■□□□ 1.23
SSBP4-207ENST00000600244 ERO1BQ86YB8 467 aa22.74■■□□□ 1.23
SSBP4-207ENST00000600244 UNC93B1Q9H1C4 597 aa22.74■■□□□ 1.23
SSBP4-207ENST00000600244 BIN2Q9UBW5 565 aaPredicted RBP22.74■■□□□ 1.23
SSBP4-207ENST00000600244 TRIM35Q9UPQ4 493 aa22.74■■□□□ 1.23
SSBP4-207ENST00000600244 SNCAIPQ9Y6H5 919 aa22.74■■□□□ 1.23
SSBP4-207ENST00000600244 MYPNQ86TC9 1320 aa22.74■■□□□ 1.23
SSBP4-207ENST00000600244 SNAP23O00161 211 aa22.73■■□□□ 1.23
SSBP4-207ENST00000600244 IRF6O14896 467 aa22.73■■□□□ 1.23
SSBP4-207ENST00000600244 FMNL1O95466 1100 aaPredicted RBP22.73■■□□□ 1.23
SSBP4-207ENST00000600244 IGKV5-2P06315 115 aa22.73■■□□□ 1.23
SSBP4-207ENST00000600244 CAPN2P17655 700 aa22.73■■□□□ 1.23
SSBP4-207ENST00000600244 RBM5P52756 815 aaKnown RBP eCLIP22.73■■□□□ 1.23
SSBP4-207ENST00000600244 SNAPC2Q13487 334 aa22.73■■□□□ 1.23
SSBP4-207ENST00000600244 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.73■■□□□ 1.23
SSBP4-207ENST00000600244 TDRD3Q9H7E2 651 aaKnown RBP22.73■■□□□ 1.23
SSBP4-207ENST00000600244 ADGRA2Q96PE1 1338 aa22.73■■□□□ 1.23
SSBP4-207ENST00000600244 MYH3P11055 1940 aa22.72■■□□□ 1.23
SSBP4-207ENST00000600244 CHRNDQ07001 517 aa22.72■■□□□ 1.23
SSBP4-207ENST00000600244 TMEM39BQ9GZU3 492 aa22.72■■□□□ 1.23
SSBP4-207ENST00000600244 KCNJ4P48050 445 aa22.71■■□□□ 1.23
SSBP4-207ENST00000600244 PPIL2Q13356 520 aa22.7■■□□□ 1.22
SSBP4-207ENST00000600244 NEUROD2Q15784 382 aa22.7■■□□□ 1.22
SSBP4-207ENST00000600244 SLAIN1Q8ND83 568 aa22.7■■□□□ 1.22
SSBP4-207ENST00000600244 MPHOSPH8Q99549 860 aa22.7■■□□□ 1.22
SSBP4-207ENST00000600244 ITGA6P23229 1130 aa22.69■■□□□ 1.22
SSBP4-207ENST00000600244 BCAMP50895 628 aa22.69■■□□□ 1.22
SSBP4-207ENST00000600244 PRKCZQ05513 592 aa22.69■■□□□ 1.22
SSBP4-207ENST00000600244 SERPINA10Q9UK55 444 aa22.69■■□□□ 1.22
SSBP4-207ENST00000600244 JAG2Q9Y219 1238 aa22.69■■□□□ 1.22
SSBP4-207ENST00000600244 ALPK3Q96L96 1907 aa22.69■■□□□ 1.22
SSBP4-207ENST00000600244 TCP10L2B9ZVM9 353 aa22.68■■□□□ 1.22
SSBP4-207ENST00000600244 ANKRD23Q86SG2 305 aa22.68■■□□□ 1.22
SSBP4-207ENST00000600244 MAP3K2Q9Y2U5 619 aa22.68■■□□□ 1.22
SSBP4-207ENST00000600244 H7C1W4 665 aa22.67■■□□□ 1.22
SSBP4-207ENST00000600244 DDX58O95786 925 aaKnown RBP22.67■■□□□ 1.22
SSBP4-207ENST00000600244 TFRCP02786 760 aaKnown RBP22.67■■□□□ 1.22
SSBP4-207ENST00000600244 ZNF804AQ7Z570 1209 aa22.67■■□□□ 1.22
SSBP4-207ENST00000600244 DZIP1LQ8IYY4 767 aaKnown RBP22.67■■□□□ 1.22
SSBP4-207ENST00000600244 ZKSCAN4Q969J2 545 aaPredicted RBP22.67■■□□□ 1.22
SSBP4-207ENST00000600244 PAWRQ96IZ0 340 aaKnown RBP22.67■■□□□ 1.22
SSBP4-207ENST00000600244 CRISPLD2Q9H0B8 497 aa22.67■■□□□ 1.22
SSBP4-207ENST00000600244 PRDM6Q9NQX0 595 aa22.67■■□□□ 1.22
SSBP4-207ENST00000600244 MBIPQ9NS73 344 aa22.67■■□□□ 1.22
SSBP4-207ENST00000600244 ARAP2Q8WZ64 1704 aa22.66■■□□□ 1.22
SSBP4-207ENST00000600244 FAM205AQ6ZU69 1335 aa22.66■■□□□ 1.22
SSBP4-207ENST00000600244 TAF5LO75529 589 aa22.66■■□□□ 1.22
SSBP4-207ENST00000600244 CSF1RP07333 972 aa22.66■■□□□ 1.22
SSBP4-207ENST00000600244 TNNI2P48788 182 aa22.66■■□□□ 1.22
SSBP4-207ENST00000600244 PLA2G12BQ9BX93 195 aa22.66■■□□□ 1.22
SSBP4-207ENST00000600244 GABRQQ9UN88 632 aa22.66■■□□□ 1.22
SSBP4-207ENST00000600244 PDHXO00330 501 aa22.65■■□□□ 1.22
SSBP4-207ENST00000600244 DEFB118Q96PH6 123 aa22.65■■□□□ 1.22
SSBP4-207ENST00000600244 WRNIP1Q96S55 665 aa22.65■■□□□ 1.22
SSBP4-207ENST00000600244 PAK6Q9NQU5 681 aaPredicted RBP22.65■■□□□ 1.22
SSBP4-207ENST00000600244 ADCY3O60266 1144 aa22.64■■□□□ 1.21
SSBP4-207ENST00000600244 BCRP11274 1271 aa22.64■■□□□ 1.21
SSBP4-207ENST00000600244 FCGRTP55899 365 aa22.64■■□□□ 1.21
SSBP4-207ENST00000600244 PPATQ06203 517 aa22.64■■□□□ 1.21
SSBP4-207ENST00000600244 KSR2Q6VAB6 950 aa22.64■■□□□ 1.21
SSBP4-207ENST00000600244 TDHQ8IZJ6 230 aa22.64■■□□□ 1.21
SSBP4-207ENST00000600244 ZMYND8Q9ULU4 1186 aaPredicted RBP22.64■■□□□ 1.21
SSBP4-207ENST00000600244 TTF2Q9UNY4 1162 aaKnown RBP22.64■■□□□ 1.21
SSBP4-207ENST00000600244 VCANP13611 3396 aa22.63■■□□□ 1.21
SSBP4-207ENST00000600244 MOGSQ13724 837 aa22.63■■□□□ 1.21
SSBP4-207ENST00000600244 CWF19L2Q2TBE0 894 aaKnown RBP22.63■■□□□ 1.21
SSBP4-207ENST00000600244 UBE3BQ7Z3V4 1068 aa22.63■■□□□ 1.21
SSBP4-207ENST00000600244 NECAB2Q7Z6G3 386 aa22.63■■□□□ 1.21
SSBP4-207ENST00000600244 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.63■■□□□ 1.21
SSBP4-207ENST00000600244 PXYLP1Q8TE99 480 aa22.63■■□□□ 1.21
SSBP4-207ENST00000600244 PI4KAP2A4QPH2 592 aa22.62■■□□□ 1.21
SSBP4-207ENST00000600244 NEURL1BA8MQ27 555 aa22.62■■□□□ 1.21
SSBP4-207ENST00000600244 ELL2O00472 640 aaPredicted RBP22.62■■□□□ 1.21
SSBP4-207ENST00000600244 INHAP05111 366 aa22.62■■□□□ 1.21
SSBP4-207ENST00000600244 ZNF853P0CG23 659 aa22.62■■□□□ 1.21
SSBP4-207ENST00000600244 C7orf61Q8IZ16 206 aa22.62■■□□□ 1.21
SSBP4-207ENST00000600244 PI4KAP1Q8N8J0 262 aa22.62■■□□□ 1.21
SSBP4-207ENST00000600244 ELNP15502 786 aa22.61■■□□□ 1.21
SSBP4-207ENST00000600244 MAGEA10P43363 369 aaPredicted RBP22.61■■□□□ 1.21
SSBP4-207ENST00000600244 MFSD14BQ5SR56 506 aa22.61■■□□□ 1.21
SSBP4-207ENST00000600244 CCDC146Q8IYE0 955 aa22.61■■□□□ 1.21
SSBP4-207ENST00000600244 DIS3LQ8TF46 1054 aaKnown RBP22.61■■□□□ 1.21
SSBP4-207ENST00000600244 KCNH4Q9UQ05 1017 aa22.61■■□□□ 1.21
SSBP4-207ENST00000600244 RPTORQ8N122 1335 aa22.6■■□□□ 1.21
SSBP4-207ENST00000600244 CRKP46108 304 aa22.6■■□□□ 1.21
SSBP4-207ENST00000600244 FLT3LGP49771 235 aa22.6■■□□□ 1.21
SSBP4-207ENST00000600244 CASP7P55210 303 aa22.6■■□□□ 1.21
SSBP4-207ENST00000600244 SPTBN5Q9NRC6 3674 aaKnown RBP22.6■■□□□ 1.21
SSBP4-207ENST00000600244 IRF5Q13568 498 aa22.59■■□□□ 1.21
SSBP4-207ENST00000600244 TDRD7Q8NHU6 1098 aaKnown RBP22.59■■□□□ 1.21
SSBP4-207ENST00000600244 GUCD1Q96NT3 240 aa22.59■■□□□ 1.21
SSBP4-207ENST00000600244 MGAMO43451 1857 aa22.59■■□□□ 1.21
SSBP4-207ENST00000600244 POTEB2H3BUK9 544 aa22.58■■□□□ 1.21
SSBP4-207ENST00000600244 NEXNQ0ZGT2 675 aa22.58■■□□□ 1.21
SSBP4-207ENST00000600244 FAM109BQ6ICB4 259 aaPredicted RBP22.58■■□□□ 1.21
SSBP4-207ENST00000600244 SYN1P17600 705 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms