RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 NOGQ13253 232 aa27.96■■■□□ 2.07
CCDC9-204ENST00000599398 CCDC102AQ96A19 550 aa27.96■■■□□ 2.07
CCDC9-204ENST00000599398 TDRD3Q9H7E2 651 aaKnown RBP27.96■■■□□ 2.07
CCDC9-204ENST00000599398 A0A1B0GUL7 405 aa27.95■■■□□ 2.06
CCDC9-204ENST00000599398 COL13A1Q5TAT6 717 aaPredicted RBP27.95■■■□□ 2.06
CCDC9-204ENST00000599398 TEKT1Q969V4 418 aa27.95■■■□□ 2.06
CCDC9-204ENST00000599398 NEUROD6Q96NK8 337 aa27.95■■■□□ 2.06
CCDC9-204ENST00000599398 SUGT1Q9Y2Z0 365 aa27.95■■■□□ 2.06
CCDC9-204ENST00000599398 MAST3O60307 1309 aa27.94■■■□□ 2.06
CCDC9-204ENST00000599398 UBE2Q2LH0YL09 131 aa27.94■■■□□ 2.06
CCDC9-204ENST00000599398 CTCFP49711 727 aaPredicted RBP27.94■■■□□ 2.06
CCDC9-204ENST00000599398 HDLBPQ00341 1268 aaKnown RBP27.94■■■□□ 2.06
CCDC9-204ENST00000599398 OS9Q13438 667 aaPredicted RBP27.94■■■□□ 2.06
CCDC9-204ENST00000599398 PRKG1Q13976 671 aa27.94■■■□□ 2.06
CCDC9-204ENST00000599398 POLA2Q14181 598 aa27.94■■■□□ 2.06
CCDC9-204ENST00000599398 CCDC102BQ68D86 513 aa27.94■■■□□ 2.06
CCDC9-204ENST00000599398 ZNF70Q9UC06 446 aaPredicted RBP27.94■■■□□ 2.06
CCDC9-204ENST00000599398 DENND2AQ9ULE3 1009 aa27.94■■■□□ 2.06
CCDC9-204ENST00000599398 PPP2R3BQ9Y5P8 575 aa27.94■■■□□ 2.06
CCDC9-204ENST00000599398 SPDYE2Q495Y8 402 aa27.93■■■□□ 2.06
CCDC9-204ENST00000599398 SSH3Q8TE77 659 aa27.93■■■□□ 2.06
CCDC9-204ENST00000599398 XAGE2Q96GT9 111 aa27.93■■■□□ 2.06
CCDC9-204ENST00000599398 FAM155AB1AL88 458 aaPredicted RBP27.92■■■□□ 2.06
CCDC9-204ENST00000599398 SEMA3EO15041 775 aa27.92■■■□□ 2.06
CCDC9-204ENST00000599398 TNFAIP1Q13829 316 aa27.92■■■□□ 2.06
CCDC9-204ENST00000599398 ARMC9Q7Z3E5 817 aa27.92■■■□□ 2.06
CCDC9-204ENST00000599398 ZIC5Q96T25 663 aa27.92■■■□□ 2.06
CCDC9-204ENST00000599398 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.92■■■□□ 2.06
CCDC9-204ENST00000599398 RASA3Q14644 834 aa27.91■■■□□ 2.06
CCDC9-204ENST00000599398 MVPQ14764 893 aaKnown RBP27.91■■■□□ 2.06
CCDC9-204ENST00000599398 GORABQ5T7V8 394 aa27.91■■■□□ 2.06
CCDC9-204ENST00000599398 SURF6O75683 361 aaKnown RBP27.9■■■□□ 2.06
CCDC9-204ENST00000599398 SLC10A3P09131 477 aa27.9■■■□□ 2.06
CCDC9-204ENST00000599398 TCP10L2B9ZVM9 353 aa27.89■■■□□ 2.06
CCDC9-204ENST00000599398 LBX1P52954 281 aa27.89■■■□□ 2.06
CCDC9-204ENST00000599398 RASAL3Q86YV0 1011 aa27.89■■■□□ 2.06
CCDC9-204ENST00000599398 ZDHHC15Q96MV8 337 aa27.89■■■□□ 2.06
CCDC9-204ENST00000599398 MRIQ9BWK5 157 aa27.89■■■□□ 2.06
CCDC9-204ENST00000599398 ANGEL1Q9UNK9 670 aaKnown RBP27.89■■■□□ 2.06
CCDC9-204ENST00000599398 LDHBP07195 334 aaKnown RBP27.88■■■□□ 2.05
CCDC9-204ENST00000599398 PRDX5P30044 214 aa27.88■■■□□ 2.05
CCDC9-204ENST00000599398 RASGRF1Q13972 1273 aa27.88■■■□□ 2.05
CCDC9-204ENST00000599398 SUPT20HL1Q3ZLR7 823 aa27.88■■■□□ 2.05
CCDC9-204ENST00000599398 FZD1Q9UP38 647 aa27.88■■■□□ 2.05
CCDC9-204ENST00000599398 COG6Q9Y2V7 657 aa27.88■■■□□ 2.05
CCDC9-204ENST00000599398 HSPA8P11142 646 aaKnown RBP27.87■■■□□ 2.05
CCDC9-204ENST00000599398 TNNI2P48788 182 aa27.87■■■□□ 2.05
CCDC9-204ENST00000599398 KIF23Q02241 960 aaPredicted RBP27.87■■■□□ 2.05
CCDC9-204ENST00000599398 NBPF12Q5TAG4 269 aaPredicted RBP27.87■■■□□ 2.05
CCDC9-204ENST00000599398 CEP85Q6P2H3 762 aa27.87■■■□□ 2.05
CCDC9-204ENST00000599398 HHIPL2Q6UWX4 724 aa27.87■■■□□ 2.05
CCDC9-204ENST00000599398 TMOD2Q9NZR1 351 aa27.87■■■□□ 2.05
CCDC9-204ENST00000599398 SALL1Q9NSC2 1324 aa27.87■■■□□ 2.05
CCDC9-204ENST00000599398 PPP1R12BO60237 982 aaPredicted RBP27.86■■■□□ 2.05
CCDC9-204ENST00000599398 DDX19BQ9UMR2 479 aa27.86■■■□□ 2.05
CCDC9-204ENST00000599398 CACNB3P54284 484 aa27.85■■■□□ 2.05
CCDC9-204ENST00000599398 DIXDC1Q155Q3 683 aa27.85■■■□□ 2.05
CCDC9-204ENST00000599398 ZGPATQ8N5A5 531 aaKnown RBP27.85■■■□□ 2.05
CCDC9-204ENST00000599398 PRDM10Q9NQV6 1147 aa27.85■■■□□ 2.05
CCDC9-204ENST00000599398 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.85■■■□□ 2.05
CCDC9-204ENST00000599398 TSKSQ9UJT2 592 aa27.85■■■□□ 2.05
CCDC9-204ENST00000599398 SSC5DA1L4H1 1573 aa27.85■■■□□ 2.05
CCDC9-204ENST00000599398 APOBEC3HQ6NTF7 200 aaKnown RBP27.84■■■□□ 2.05
CCDC9-204ENST00000599398 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.84■■■□□ 2.05
CCDC9-204ENST00000599398 ABCF2Q9UG63 623 aa27.84■■■□□ 2.05
CCDC9-204ENST00000599398 ZBTB22O15209 634 aa27.83■■■□□ 2.05
CCDC9-204ENST00000599398 CA12O43570 354 aa27.83■■■□□ 2.05
CCDC9-204ENST00000599398 TNNI3KQ59H18 835 aa27.83■■■□□ 2.05
CCDC9-204ENST00000599398 TNS4Q8IZW8 715 aa27.83■■■□□ 2.05
CCDC9-204ENST00000599398 TMEM39BQ9GZU3 492 aa27.83■■■□□ 2.05
CCDC9-204ENST00000599398 NOP58Q9Y2X3 529 aaKnown RBP27.83■■■□□ 2.05
CCDC9-204ENST00000599398 FPGT-TNNI3KV9GXZ4 949 aa27.83■■■□□ 2.05
CCDC9-204ENST00000599398 PDS5AQ29RF7 1337 aaKnown RBP27.83■■■□□ 2.05
CCDC9-204ENST00000599398 GPR108Q9NPR9 543 aa27.82■■■□□ 2.04
CCDC9-204ENST00000599398 DAGLAQ9Y4D2 1042 aa27.82■■■□□ 2.04
CCDC9-204ENST00000599398 AKAP11Q9UKA4 1901 aa27.81■■■□□ 2.04
CCDC9-204ENST00000599398 MKRN3Q13064 507 aaKnown RBP27.81■■■□□ 2.04
CCDC9-204ENST00000599398 LDLRAD1Q5T700 205 aa27.81■■■□□ 2.04
CCDC9-204ENST00000599398 DZIP1Q86YF9 867 aaKnown RBP27.81■■■□□ 2.04
CCDC9-204ENST00000599398 MYH2Q9UKX2 1941 aa27.8■■■□□ 2.04
CCDC9-204ENST00000599398 IREB2P48200 963 aaKnown RBP27.8■■■□□ 2.04
CCDC9-204ENST00000599398 MAP3K11Q16584 847 aa27.8■■■□□ 2.04
CCDC9-204ENST00000599398 SPTY2D1Q68D10 685 aaPredicted RBP27.8■■■□□ 2.04
CCDC9-204ENST00000599398 CDAN1Q8IWY9 1227 aa27.8■■■□□ 2.04
CCDC9-204ENST00000599398 CHMP4BQ9H444 224 aaKnown RBP27.8■■■□□ 2.04
CCDC9-204ENST00000599398 HMG20BQ9P0W2 317 aa27.8■■■□□ 2.04
CCDC9-204ENST00000599398 ARID4AP29374 1257 aaPredicted RBP27.79■■■□□ 2.04
CCDC9-204ENST00000599398 IFFO2Q5TF58 517 aa27.79■■■□□ 2.04
CCDC9-204ENST00000599398 PI16Q6UXB8 463 aa27.79■■■□□ 2.04
CCDC9-204ENST00000599398 SPATA5Q8NB90 893 aa27.79■■■□□ 2.04
CCDC9-204ENST00000599398 YTHDC1Q96MU7 727 aaKnown RBP27.79■■■□□ 2.04
CCDC9-204ENST00000599398 TEPSINQ96N21 525 aa27.79■■■□□ 2.04
CCDC9-204ENST00000599398 CSRNP1Q96S65 589 aa27.79■■■□□ 2.04
CCDC9-204ENST00000599398 EXOC6BQ9Y2D4 811 aa27.79■■■□□ 2.04
CCDC9-204ENST00000599398 USP2O75604 605 aaPredicted RBP27.78■■■□□ 2.04
CCDC9-204ENST00000599398 UQCRFS1P1P0C7P4 283 aa27.78■■■□□ 2.04
CCDC9-204ENST00000599398 TTC39AQ5SRH9 613 aa27.78■■■□□ 2.04
CCDC9-204ENST00000599398 C20orf194Q5TEA3 1177 aa27.78■■■□□ 2.04
CCDC9-204ENST00000599398 SLC10A4Q96EP9 437 aa27.78■■■□□ 2.04
CCDC9-204ENST00000599398 DBNDD2Q9BQY9 259 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms