RNA–Protein interactions for RNA: ENST00000598886.1

SMG9-208, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 681 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-208ENST00000598886 RBBP6Q7Z6E9 1792 aaKnown RBP19.7■□□□□ 0.74
SMG9-208ENST00000598886 PPP1R12BO60237 982 aaPredicted RBP19.7■□□□□ 0.74
SMG9-208ENST00000598886 SUPT20HL1Q3ZLR7 823 aa19.7■□□□□ 0.74
SMG9-208ENST00000598886 ATG9AQ7Z3C6 839 aa19.7■□□□□ 0.74
SMG9-208ENST00000598886 MANSC4A6NHS7 340 aaPredicted RBP19.69■□□□□ 0.74
SMG9-208ENST00000598886 BCAMP50895 628 aa19.69■□□□□ 0.74
SMG9-208ENST00000598886 RBM5P52756 815 aaKnown RBP eCLIP19.69■□□□□ 0.74
SMG9-208ENST00000598886 HDLBPQ00341 1268 aaKnown RBP19.69■□□□□ 0.74
SMG9-208ENST00000598886 IFNL1Q8IU54 200 aa19.69■□□□□ 0.74
SMG9-208ENST00000598886 SLC10A4Q96EP9 437 aa19.69■□□□□ 0.74
SMG9-208ENST00000598886 HPS5Q9UPZ3 1129 aa19.69■□□□□ 0.74
SMG9-208ENST00000598886 PDE4DIPQ5VU43 2346 aa19.69■□□□□ 0.74
SMG9-208ENST00000598886 EYA2O00167 538 aa19.68■□□□□ 0.74
SMG9-208ENST00000598886 PUM3Q15397 648 aaKnown RBP19.68■□□□□ 0.74
SMG9-208ENST00000598886 SMC4Q9NTJ3 1288 aa19.68■□□□□ 0.74
SMG9-208ENST00000598886 TESPA1A2RU30 521 aaPredicted RBP19.67■□□□□ 0.74
SMG9-208ENST00000598886 SOX10P56693 466 aa19.67■□□□□ 0.74
SMG9-208ENST00000598886 INHBEP58166 350 aa19.67■□□□□ 0.74
SMG9-208ENST00000598886 TNFAIP1Q13829 316 aa19.67■□□□□ 0.74
SMG9-208ENST00000598886 PKN2Q16513 984 aaKnown RBP19.67■□□□□ 0.74
SMG9-208ENST00000598886 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.67■□□□□ 0.74
SMG9-208ENST00000598886 ANKRD13AQ8IZ07 590 aa19.67■□□□□ 0.74
SMG9-208ENST00000598886 TBC1D22AQ8WUA7 517 aa19.67■□□□□ 0.74
SMG9-208ENST00000598886 PTPN18Q99952 460 aa19.67■□□□□ 0.74
SMG9-208ENST00000598886 TMEM39BQ9GZU3 492 aa19.67■□□□□ 0.74
SMG9-208ENST00000598886 ALDH1A1P00352 501 aa19.66■□□□□ 0.74
SMG9-208ENST00000598886 CT47B1P0C2W7 299 aaPredicted RBP19.66■□□□□ 0.74
SMG9-208ENST00000598886 IREB2P48200 963 aaKnown RBP19.66■□□□□ 0.74
SMG9-208ENST00000598886 CHAF1AQ13111 956 aaPredicted RBP19.66■□□□□ 0.74
SMG9-208ENST00000598886 CAVIN4Q5BKX8 364 aa19.66■□□□□ 0.74
SMG9-208ENST00000598886 ZDHHC15Q96MV8 337 aa19.66■□□□□ 0.74
SMG9-208ENST00000598886 MRIQ9BWK5 157 aa19.66■□□□□ 0.74
SMG9-208ENST00000598886 TCP10L2B9ZVM9 353 aa19.65■□□□□ 0.74
SMG9-208ENST00000598886 FKTNO75072 461 aa19.65■□□□□ 0.74
SMG9-208ENST00000598886 APOBEC3HQ6NTF7 200 aaKnown RBP19.65■□□□□ 0.74
SMG9-208ENST00000598886 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.65■□□□□ 0.74
SMG9-208ENST00000598886 RPAP1Q9BWH6 1393 aaPredicted RBP19.65■□□□□ 0.74
SMG9-208ENST00000598886 ZSWIM8A7E2V4 1837 aa19.65■□□□□ 0.74
SMG9-208ENST00000598886 CACNB3P54284 484 aa19.64■□□□□ 0.73
SMG9-208ENST00000598886 CAP1Q01518 475 aa19.64■□□□□ 0.73
SMG9-208ENST00000598886 VPS37DQ86XT2 251 aa19.64■□□□□ 0.73
SMG9-208ENST00000598886 CNKSR2Q8WXI2 1034 aa19.64■□□□□ 0.73
SMG9-208ENST00000598886 TEKT1Q969V4 418 aa19.64■□□□□ 0.73
SMG9-208ENST00000598886 MS4A4AQ96JQ5 239 aa19.64■□□□□ 0.73
SMG9-208ENST00000598886 NOB1Q9ULX3 412 aaKnown RBP19.64■□□□□ 0.73
SMG9-208ENST00000598886 SUGT1Q9Y2Z0 365 aa19.64■□□□□ 0.73
SMG9-208ENST00000598886 DOCK2Q92608 1830 aa19.64■□□□□ 0.73
SMG9-208ENST00000598886 CENPFP49454 3210 aa19.64■□□□□ 0.73
SMG9-208ENST00000598886 MYH2Q9UKX2 1941 aa19.63■□□□□ 0.73
SMG9-208ENST00000598886 ZBTB22O15209 634 aa19.63■□□□□ 0.73
SMG9-208ENST00000598886 CIAO1O76071 339 aa19.63■□□□□ 0.73
SMG9-208ENST00000598886 VGLL4Q14135 290 aa19.63■□□□□ 0.73
SMG9-208ENST00000598886 FBXO46Q6PJ61 603 aaPredicted RBP19.63■□□□□ 0.73
SMG9-208ENST00000598886 LPIN2Q92539 896 aa19.63■□□□□ 0.73
SMG9-208ENST00000598886 ELP3Q9H9T3 547 aa19.63■□□□□ 0.73
SMG9-208ENST00000598886 FBXO3Q9UK99 471 aa19.63■□□□□ 0.73
SMG9-208ENST00000598886 CCER2I3L3R5 266 aa19.62■□□□□ 0.73
SMG9-208ENST00000598886 IFIT1P09914 478 aaKnown RBP19.62■□□□□ 0.73
SMG9-208ENST00000598886 FKBP1CQ5VVH2 108 aa19.62■□□□□ 0.73
SMG9-208ENST00000598886 OPTNQ96CV9 577 aa19.62■□□□□ 0.73
SMG9-208ENST00000598886 MAST3O60307 1309 aa19.61■□□□□ 0.73
SMG9-208ENST00000598886 UBTFL1P0CB47 393 aaPredicted RBP19.61■□□□□ 0.73
SMG9-208ENST00000598886 RARSP54136 660 aaKnown RBP19.61■□□□□ 0.73
SMG9-208ENST00000598886 CRHR2Q13324 411 aa19.61■□□□□ 0.73
SMG9-208ENST00000598886 HHIPL2Q6UWX4 724 aa19.61■□□□□ 0.73
SMG9-208ENST00000598886 FAM83AQ86UY5 434 aa19.61■□□□□ 0.73
SMG9-208ENST00000598886 SNCAIPQ9Y6H5 919 aa19.61■□□□□ 0.73
SMG9-208ENST00000598886 SLC5A1P13866 664 aa19.6■□□□□ 0.73
SMG9-208ENST00000598886 TNNI2P48788 182 aa19.6■□□□□ 0.73
SMG9-208ENST00000598886 BRI3BPQ8WY22 251 aa19.6■□□□□ 0.73
SMG9-208ENST00000598886 MEIS3Q99687 375 aa19.6■□□□□ 0.73
SMG9-208ENST00000598886 LRRFIP2Q9Y608 721 aaKnown RBP19.6■□□□□ 0.73
SMG9-208ENST00000598886 RFX7Q2KHR2 1363 aa19.59■□□□□ 0.73
SMG9-208ENST00000598886 BRCA2P51587 3418 aa19.59■□□□□ 0.73
SMG9-208ENST00000598886 FRAT2O75474 233 aaPredicted RBP19.59■□□□□ 0.73
SMG9-208ENST00000598886 OTOP1Q7RTM1 612 aa19.59■□□□□ 0.73
SMG9-208ENST00000598886 API5Q9BZZ5 524 aaKnown RBP19.59■□□□□ 0.73
SMG9-208ENST00000598886 SIL1Q9H173 461 aa19.59■□□□□ 0.73
SMG9-208ENST00000598886 COPRSQ9NQ92 184 aa19.59■□□□□ 0.73
SMG9-208ENST00000598886 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.59■□□□□ 0.73
SMG9-208ENST00000598886 SALL1Q9NSC2 1324 aa19.58■□□□□ 0.73
SMG9-208ENST00000598886 SPDYE5A6NIY4 337 aa19.58■□□□□ 0.72
SMG9-208ENST00000598886 PRDX5P30044 214 aa19.58■□□□□ 0.72
SMG9-208ENST00000598886 MAP3K9P80192 1104 aa19.58■□□□□ 0.72
SMG9-208ENST00000598886 ATP2B3Q16720 1220 aa19.58■□□□□ 0.72
SMG9-208ENST00000598886 INTS3Q68E01 1043 aaKnown RBP19.58■□□□□ 0.72
SMG9-208ENST00000598886 WDR66Q8TBY9 1149 aa19.58■□□□□ 0.72
SMG9-208ENST00000598886 PA2G4Q9UQ80 394 aaKnown RBP19.58■□□□□ 0.72
SMG9-208ENST00000598886 DAGLAQ9Y4D2 1042 aa19.58■□□□□ 0.72
SMG9-208ENST00000598886 ATRNL1Q5VV63 1379 aa19.57■□□□□ 0.72
SMG9-208ENST00000598886 PHKA1P46020 1223 aa19.57■□□□□ 0.72
SMG9-208ENST00000598886 ARHGAP45Q92619 1136 aa19.57■□□□□ 0.72
SMG9-208ENST00000598886 PHIPQ8WWQ0 1821 aa19.57■□□□□ 0.72
SMG9-208ENST00000598886 PTPRFP10586 1907 aa19.57■□□□□ 0.72
SMG9-208ENST00000598886 IL15P40933 162 aaPredicted RBP19.56■□□□□ 0.72
SMG9-208ENST00000598886 MTX1Q13505 466 aa19.56■□□□□ 0.72
SMG9-208ENST00000598886 DIXDC1Q155Q3 683 aa19.56■□□□□ 0.72
SMG9-208ENST00000598886 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.56■□□□□ 0.72
SMG9-208ENST00000598886 AK9Q5TCS8 1911 aa19.56■□□□□ 0.72
SMG9-208ENST00000598886 SLC34A2O95436 690 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms